Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307B08f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 62 4e-11
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 44 1e-05
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 40 3e-04
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 39 4e-04
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 33 0.020
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 31 0.079
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 30 0.24
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 27 1.3
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 27 1.3
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 1.7
SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyc... 27 2.2
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 3.9
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 3.9
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 5.2
SPBC365.02c |cox10||protoheme IX farnesyltransferase|Schizosacch... 25 6.8
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 9.0
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 62.5 bits (145), Expect = 4e-11
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +2
Query: 302 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQ 457
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA G G +
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYE 72
Score = 39.9 bits (89), Expect = 2e-04
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 444 GEGYKGSKFHRVIKNFMIQGG*FYQG 521
G GY+GS FHRVI NFMIQGG +G
Sbjct: 68 GFGYEGSIFHRVIPNFMIQGGDITKG 93
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 44.0 bits (99), Expect = 1e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS+FHRVIKNFM+QGG F +G
Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRG 73
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQL 427
K+S D KI TI LF VPKT +NF L
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASL 38
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 39.5 bits (88), Expect = 3e-04
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 444 GEGYKGSKFHRVIKNFMIQGG*FYQG 521
G GY GS FHRVI FM+QGG F +G
Sbjct: 43 GYGYAGSTFHRVIPQFMLQGGDFTRG 68
Score = 29.5 bits (63), Expect = 0.32
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 332 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
FD+ +G IV LF VPKT NF L G G
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG 45
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 39.1 bits (87), Expect = 4e-04
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 450 GYKGSKFHRVIKNFMIQGG*FYQG 521
GYK S FHR+I+ FMIQGG F G
Sbjct: 54 GYKNSTFHRIIQGFMIQGGDFVSG 77
Score = 32.7 bits (71), Expect = 0.034
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +2
Query: 326 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
V D+ I +G I I LF VPKT ENF Q GV ++ + N FH
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFH 61
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 33.5 bits (73), Expect = 0.020
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y + FHR+IKNFMIQGG
Sbjct: 491 YDNTIFHRIIKNFMIQGG 508
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 31.5 bits (68), Expect = 0.079
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 350 DDNIGTIVIGLFGKTVPKTTENFFQLAQ 433
+ +G +VI LF K PKT ENF +L +
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCK 33
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 29.9 bits (64), Expect = 0.24
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 356 NIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGV 454
++G I+I L+ + PKT +NF+ LA++ GV
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAKEGYYDGV 41
Score = 29.5 bits (63), Expect = 0.32
Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +3
Query: 438 LXGEGY-KGSKFHRVIKNFMIQGG 506
L EGY G FHRVI +F+IQGG
Sbjct: 32 LAKEGYYDGVIFHRVIPDFVIQGG 55
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 344 IGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFHDPR 502
+ D+ I +V G+ T+ + T+ +++ + EQ+P SN F DPR
Sbjct: 58 LNDEQISELVNGVNSTTIKENTKK--EISNPNDSTRLPLEQIPGSNNLFLDPR 108
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y+ + FHR I FMIQGG
Sbjct: 312 YRNTIFHRNIARFMIQGG 329
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 27.1 bits (57), Expect = 1.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y G+ HRV+ F+IQGG
Sbjct: 49 YDGTIVHRVVPEFLIQGG 66
Score = 26.6 bits (56), Expect = 2.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 362 GTIVIGLFGKTVPKTTENFFQLA-QKPXGGGVQREQVPQSN*KFHDPRG 505
G I I L+ K VPK NF QL + G + VP+ + DP G
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTG 70
>SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 371 VIGLFGKTVPKTTENFFQLAQKPXGG 448
++ +F KT P T E FF + ++P G
Sbjct: 302 LVVIFQKTDPSTKEKFFLIRKRPSAG 327
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 3.9
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 348 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 205
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 220 FSSFPCYFYKIRFECLFFQNLRY 152
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 176 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 328
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
>SPBC365.02c |cox10||protoheme IX
farnesyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 502 PWIMKFLITLWNLLPLYPSPXRFLS*LKEVLSCL 401
P ++ FL PLYP P FL K L+ L
Sbjct: 65 PQVLTFLSKRMQAAPLYPKPSAFLELGKPRLTVL 98
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = -2
Query: 217 SSFPCYFYKIRFECLFFQNLRYKIRNLI*KPSQFTILLIRNNHTVLSLASSVEL 56
++ P + Y E L+ + +I +L+ +P+Q + +I + H+ + S++EL
Sbjct: 323 NAIPEHGYLHSSELLYPEGTEQQIISLVDEPNQNALWIIEHEHSQDNNRSNIEL 376
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,052,188
Number of Sequences: 5004
Number of extensions: 39499
Number of successful extensions: 122
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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