Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307B08f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 56 2e-08
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 53 1e-07
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 50 1e-06
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 49 2e-06
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 48 3e-06
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 43 2e-04
09_06_0359 + 22508900-22509439 42 4e-04
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 40 0.002
02_01_0160 + 1116160-1116678 40 0.002
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 38 0.004
10_01_0309 + 3417602-3418147 35 0.046
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 35 0.046
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 34 0.060
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 33 0.14
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 33 0.14
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 31 0.56
06_01_0214 + 1634171-1634173,1634263-1634742 31 0.56
10_08_0922 - 21593030-21593225,21593319-21594142 31 0.74
10_01_0310 + 3425099-3425218 29 3.0
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 28 4.0
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 27 6.9
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 27 9.1
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 55.6 bits (128), Expect = 2e-08
Identities = 32/76 (42%), Positives = 41/76 (53%)
Frame = +2
Query: 266 LFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXG 445
L +A AK + +VTHKV FD++I G +V+GLFGKTVPKT ENF L G
Sbjct: 34 LALAQAKKSKADL-TEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKG 92
Query: 446 GGVQREQVPQSN*KFH 493
G + + FH
Sbjct: 93 TGKSGKALHFKGSAFH 108
Score = 35.9 bits (79), Expect = 0.020
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
+KGS FHR+I +FMIQGG F G
Sbjct: 102 FKGSAFHRIIPSFMIQGGDFTLG 124
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Frame = +2
Query: 269 FIASAKSD--EIPKGPKVTHKVSFDMKIGDD---NIGTIVIGLFGKTVPKTTENFFQLAQ 433
F++SA +D E+ K+T+KV FD+ IG+ N+G +VIGL+G VP+T ENF L
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCT 123
Query: 434 KPXGGG 451
G G
Sbjct: 124 GEKGFG 129
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 444 GEGYKGSKFHRVIKNFMIQGG*FYQG 521
G GYKGS FHRVIK+FMIQGG F +G
Sbjct: 127 GFGYKGSSFHRVIKDFMIQGGDFDKG 152
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = +2
Query: 311 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KF 490
KVT KV FD+ I G IV+GLFG TVPKT ENF + G G + + F
Sbjct: 37 KVTTKVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPF 96
Query: 491 H 493
H
Sbjct: 97 H 97
Score = 34.3 bits (75), Expect = 0.060
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
YKG+ FHR+I FMIQGG
Sbjct: 91 YKGTPFHRIIPGFMIQGG 108
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +2
Query: 308 PKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*K 487
P VT++V D++I +IG IVIGL+G VPKT NF L G G + + + +
Sbjct: 34 PAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSR 93
Query: 488 FH 493
FH
Sbjct: 94 FH 95
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS+FHR+I FMIQGG +G
Sbjct: 89 YKGSRFHRIIPGFMIQGGDIVRG 111
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2
Query: 311 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
KV K FD+++G + G IVIGLFG+ VPKT +NF L G G
Sbjct: 63 KVNSKCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYG 109
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 444 GEGYKGSKFHRVIKNFMIQGG*F 512
G GYKG FHR+IK+FMIQGG F
Sbjct: 107 GYGYKGCSFHRIIKDFMIQGGDF 129
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3
Query: 447 EGYKGSKFHRVIKNFMIQGG*FYQG 521
+GYKG +FHRVIK+FMIQGG + +G
Sbjct: 84 QGYKGCQFHRVIKDFMIQGGDYMKG 108
Score = 34.3 bits (75), Expect = 0.060
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +2
Query: 299 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ 424
P PK V FD+ IG G I + LF VPKT ENF Q
Sbjct: 31 PPNPK-NPVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQ 71
>09_06_0359 + 22508900-22509439
Length = 179
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
KV FD+ IG G +V+ LF TVPKT ENF L G G + + FH
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFH 63
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS FHR+I NFM QGG F +G
Sbjct: 57 YKGSAFHRIIPNFMCQGGDFTRG 79
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/57 (42%), Positives = 28/57 (49%)
Frame = +2
Query: 296 IPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQ 466
+PK K H V FD+ IG I LF VPKTTENF L G GV ++
Sbjct: 1 MPKAKKNPH-VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQK 56
>02_01_0160 + 1116160-1116678
Length = 172
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
+V FDM +G G IV+ L+ K VP+T ENF L G G + + FH
Sbjct: 5 RVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFH 61
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS FHRVI FM QGG F +G
Sbjct: 55 YKGSTFHRVIPEFMCQGGDFTRG 77
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS FHRVIK FM QGG F G
Sbjct: 59 YKGSLFHRVIKGFMAQGGDFSNG 81
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 326 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
V D+ IGD+ +V LF P+T ENF L G G
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIG 50
>10_01_0309 + 3417602-3418147
Length = 181
Score = 34.7 bits (76), Expect = 0.046
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 311 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KF 490
K +V D+ IG + +G +VI L VP T ENF +L G + ++ F
Sbjct: 8 KSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAF 67
Query: 491 H 493
H
Sbjct: 68 H 68
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
YKGS FHRV+ FM QGG
Sbjct: 62 YKGSAFHRVVPGFMCQGG 79
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 34.7 bits (76), Expect = 0.046
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 IASAKSDEIP-KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGG 448
+ASA + E+ K P+ D+ IG + G IVI L+ VP+T ENF L G
Sbjct: 13 VASAAAAEVEVKNPRCF----MDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGV 68
Query: 449 G 451
G
Sbjct: 69 G 69
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 456 KGSKFHRVIKNFMIQGG 506
+GS FHRVIK FM+QGG
Sbjct: 118 QGSCFHRVIKGFMVQGG 134
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 34.3 bits (75), Expect = 0.060
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 236 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 415
GT T A +A+ K +E + D+ IG D G IV+ L+ P+T EN
Sbjct: 7 GTTTAAAAAA--VAAGKEEEAEVVVVRNPRCYLDVSIGGDMEGRIVVELYASVAPRTAEN 64
Query: 416 FFQLAQKPXG 445
F L G
Sbjct: 65 FRALCTGEKG 74
Score = 31.1 bits (67), Expect = 0.56
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 456 KGSKFHRVIKNFMIQGG 506
KGS HR++K FM+QGG
Sbjct: 100 KGSCIHRIVKGFMVQGG 116
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y G FHR IKNFMIQGG
Sbjct: 381 YNGLIFHRSIKNFMIQGG 398
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y G+ FHRVIK+F++QGG
Sbjct: 49 YDGTLFHRVIKSFLVQGG 66
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*F 512
+KG F VIKNF+IQGG F
Sbjct: 130 FKGMPFRHVIKNFVIQGGDF 149
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 31.1 bits (67), Expect = 0.56
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y G+ FHR IK FMIQGG
Sbjct: 37 YDGTIFHRNIKGFMIQGG 54
>10_08_0922 - 21593030-21593225,21593319-21594142
Length = 339
Score = 30.7 bits (66), Expect = 0.74
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 506 PPLDHEIFNYSVELAPFVPLPXQVSEL 426
PP+ H+ +++V +AP +P P V+EL
Sbjct: 189 PPMYHQYHHHAVHMAPMLPPPPPVAEL 215
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 362 GTIVIGLFGKTVPKTTENF 418
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y FHR+IK+F++QGG
Sbjct: 46 YDNVIFHRIIKDFIVQGG 63
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +2
Query: 236 GTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTEN 415
G + L ILL+I S KSD K V H + IGDD + +I L K V T+ N
Sbjct: 349 GEPQLELLILLYIISLKSDAYDKLASVAHDL-----IGDDEVDSISSVL--KVVRVTSSN 401
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y FHRVIK FMIQ G
Sbjct: 532 YDNLIFHRVIKGFMIQTG 549
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,418,422
Number of Sequences: 37544
Number of extensions: 222323
Number of successful extensions: 394
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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