Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307B08f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 61 5e-10
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 59 2e-09
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 54 8e-08
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 51 4e-07
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 48 4e-06
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 46 2e-05
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 42 2e-04
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 39 0.002
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 38 0.003
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 38 0.004
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 38 0.004
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 38 0.004
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 36 0.012
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 35 0.029
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 35 0.038
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 35 0.038
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 33 0.088
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 33 0.15
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 32 0.27
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 31 0.47
At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative (CH... 29 1.9
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 29 2.5
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 28 3.3
At5g63700.1 68418.m07996 zinc finger (C3HC4 type RING finger) fa... 28 4.4
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 27 5.8
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 27 7.7
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 27 7.7
At3g18524.1 68416.m02355 DNA mismatch repair protein MSH2 (MSH2)... 27 7.7
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 60.9 bits (141), Expect = 5e-10
Identities = 38/93 (40%), Positives = 52/93 (55%)
Frame = +2
Query: 215 TKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 394
+ + L++ +L + LG L I + KS E K ++THKV FD++I G IV+GLFGKT
Sbjct: 3 SSVTLLLWSLLL-LGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKT 59
Query: 395 VPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
VPKT ENF L G G + + FH
Sbjct: 60 VPKTVENFRALCTGEKGIGKNGKALHYKGSSFH 92
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS FHR+I +FM+QGG F G
Sbjct: 86 YKGSSFHRIIPSFMLQGGDFTHG 108
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/74 (45%), Positives = 43/74 (58%)
Frame = +2
Query: 272 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
IAS ++ E K +VTHKV FD++I + G +VIGLFGK VPKT ENF L G G
Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
Query: 452 VQREQVPQSN*KFH 493
+ + KFH
Sbjct: 76 KSGKPLHYKGSKFH 89
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGSKFHR+I +FMIQGG F G
Sbjct: 83 YKGSKFHRIIPSFMIQGGDFTHG 105
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 53.6 bits (123), Expect = 8e-08
Identities = 25/49 (51%), Positives = 35/49 (71%)
Frame = +2
Query: 272 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENF 418
+A+ + + I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENF 127
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 450 GYKGSKFHRVIKNFMIQGG*FYQG 521
GYKGS FHR+IK+FMIQGG F +G
Sbjct: 138 GYKGSSFHRIIKDFMIQGGDFTEG 161
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 272 IASAKSDEIPKGPK-VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGG 448
I AK +++ + + VTHKV FD++I G I+IGLFG VPKT ENF L G
Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101
Query: 449 G 451
G
Sbjct: 102 G 102
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
+KGS FHR+I FMIQGG F +G
Sbjct: 110 FKGSSFHRIIPGFMIQGGDFTRG 132
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 218 KLVLIMGTLTMALGILLFIASAKSD-EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 394
+ +L++ LT+ L LF + ++ + ++T++V D+ I +G IVIGL+G
Sbjct: 12 RCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTV 71
Query: 395 VPKTTENFFQLAQKPXG 445
VPKT ENF L G
Sbjct: 72 VPKTVENFRALCTGEKG 88
Score = 33.5 bits (73), Expect = 0.088
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKG+ FHR+I F+IQGG G
Sbjct: 98 YKGTPFHRIISGFVIQGGDIIHG 120
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 311 KVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
K+THKV FD+ +G+ G IVIGL+G VP+T ENF L G G
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG 136
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 444 GEGYKGSKFHRVIKNFMIQGG*FYQG 521
G GYKGS FHRVI++FMIQGG F +G
Sbjct: 134 GFGYKGSTFHRVIRDFMIQGGDFEKG 159
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
KV FDM +G + G IV+ L+ T P+T ENF L G G Q + + FH
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFH 62
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS FHRVI FM QGG F G
Sbjct: 56 YKGSSFHRVIPKFMCQGGDFTAG 78
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
+KGSKFHRVI NFM QGG F G
Sbjct: 55 FKGSKFHRVIPNFMCQGGDFTAG 77
Score = 35.1 bits (77), Expect = 0.029
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
KV FDM I G IV+ L+ P+T ENF L G G + + KFH
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFH 61
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
YKG++FHRVIK FMIQGG
Sbjct: 56 YKGNRFHRVIKGFMIQGG 73
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
K D+ IG + G IVI L+ VPKT ENF L G G
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLG 47
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 311 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
K V D+ IG D + IVI LF VPKT ENF L G G
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVG 50
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
+KGS FHRVIK FM QGG F G
Sbjct: 59 FKGSSFHRVIKGFMAQGGDFSNG 81
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 311 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
K V D+ IG D + IVI LF VPKT ENF L G G
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVG 50
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
+KGS FHRVIK FM QGG F G
Sbjct: 59 FKGSSFHRVIKGFMAQGGDFSNG 81
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
+KGS FHRVI NFM QGG F +G
Sbjct: 56 FKGSSFHRVIPNFMCQGGDFTKG 78
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
KV FDM IG G IV+ L+ PKT ENF L G G + + FH
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*FYQG 521
YKGS FHR+I FM QGG F +G
Sbjct: 55 YKGSAFHRIIPGFMCQGGDFTRG 77
Score = 33.9 bits (74), Expect = 0.067
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGGVQREQVPQSN*KFH 493
KV FD+ IG G +V+ LF P+T NF L G G + + FH
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFH 61
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 35.1 bits (77), Expect = 0.029
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +2
Query: 212 RTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTH--------KVSFDMKIGDDNIGT 367
++ L+L++ T T L LL + A++D I P +T+ K D+ I + IG
Sbjct: 50 KSSLLLLLTTQT-TLTPLLDFSKAQADTIAN-PNLTNCENRIPTKKAFIDVSIDGEPIGR 107
Query: 368 IVIGLFGKTVPKTTENFFQLAQKPXG 445
I+IGL+G VP T F + G
Sbjct: 108 IIIGLYGDDVPAGTARFSSIVSGKAG 133
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 34.7 bits (76), Expect = 0.038
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
+V FDM + IG I + LF T P T ENF L G G
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMG 47
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG*F 512
+KGS FHRVI FM QGG F
Sbjct: 55 FKGSIFHRVIPGFMCQGGDF 74
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 34.7 bits (76), Expect = 0.038
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 450 GYKGSKFHRVIKNFMIQGG*F 512
GYK +FHRVIK+FM+Q G F
Sbjct: 80 GYKECQFHRVIKDFMVQSGDF 100
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +2
Query: 299 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQ 424
P PK V FD+ IG G I + LF PKT ENF Q
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQ 66
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 323 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
KV FD+ + G IVI LF P+T ENF L G G
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIG 47
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y G FHR I+NFMIQGG
Sbjct: 380 YNGVAFHRSIRNFMIQGG 397
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 311 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPXGGG 451
K +V D+ I D T+V LF + PKT+ENF L G G
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIG 50
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y G+ FHR IK FMIQGG
Sbjct: 37 YDGTIFHRNIKGFMIQGG 54
>At5g58460.1 68418.m07321 cation/hydrogen exchanger, putative
(CHX25) similar to Na+/H+-exchanging protein slr1595,
Synechocystis sp., PIR:S74951; monovalent cation:proton
antiporter family 2 (CPA2) member, PMID:11500563
Length = 857
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -3
Query: 402 LGTVFPNNP-ITIVPILSSPIFMSKLTL*VTLGPLGISSDLALAMNNKIPKAIVRVPMIK 226
LG V P+ P + + S F+++ + + +G +++ L PK I P+I
Sbjct: 329 LGLVVPHGPPLGSTLAIRSETFVNEFLMPFSFALVGQKTNVNLISKETWPKQIS--PLIY 386
Query: 225 TSLVRFLAIFTKFVSNVYFFKI 160
S+V F+ F FFK+
Sbjct: 387 MSIVGFVTKFVSSTGAALFFKV 408
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
+KG F RVIKN+++Q G
Sbjct: 117 FKGMPFQRVIKNYLVQAG 134
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
+KG F RVIKN+++Q G
Sbjct: 117 FKGMPFQRVIKNYLVQAG 134
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
+KG F RVIKN+++Q G
Sbjct: 117 FKGMPFQRVIKNYLVQAG 134
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 453 YKGSKFHRVIKNFMIQGG 506
Y FHR++K+F++QGG
Sbjct: 46 YDNVLFHRIVKDFIVQGG 63
>At5g63700.1 68418.m07996 zinc finger (C3HC4 type RING finger)
family protein contains Pfam PF03126: Plus-3 domain;
contains Pfam PF02201: BAF60b domain of the SWIB
complex; contains Pfam PF00628: PHD-finger domain;
contains Prosite Zinc finger, C3HC4 type (RING finger),
signature; similar to CPRF interacting protein
(GI:9588690) [Petroselinum crispum]
Length = 571
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 389 KTVPKTTENFFQLAQKPXGGGVQREQV 469
K +P+ E+F ++ Q+P GG+ E V
Sbjct: 541 KEIPRIIEDFIEIKQEPCVGGLSHEAV 567
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 447 EGY-KGSKFHRVIKNFMIQGG 506
EGY + FHRVI F++QGG
Sbjct: 46 EGYFDNTIFHRVIPGFLVQGG 66
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 230 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 409
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 410 ENFFQLAQKPXGG 448
+F + + GG
Sbjct: 349 NDFAESNKIGRGG 361
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 230 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 409
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 410 ENFFQLAQKPXGG 448
+F + + GG
Sbjct: 349 NDFAESNKIGRGG 361
>At3g18524.1 68416.m02355 DNA mismatch repair protein MSH2 (MSH2)
identical to SP|O24617 DNA mismatch repair protein MSH2
(AtMsh2) {Arabidopsis thaliana}
Length = 937
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 264 KIPKAIVRVPMIKTSLVRFLAIFTKFVSNVYFFKI 160
K+ ++ +R+P IKT++ ++ F +S Y K+
Sbjct: 399 KLYQSTIRLPFIKTAMQQYTGEFASLISERYLKKL 433
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,456,885
Number of Sequences: 28952
Number of extensions: 198874
Number of successful extensions: 408
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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