Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307B05f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016086-1|AAV36971.1|  730|Drosophila melanogaster LD44003p pro...    28   6.7  
AY094895-1|AAM11248.1|  514|Drosophila melanogaster RE68725p pro...    28   6.7  
AF277389-1|AAG17398.1|  469|Drosophila melanogaster gamma-syntro...    28   6.7  
AE014297-1048|AAF54457.1|  730|Drosophila melanogaster CG9467-PA...    28   6.7  
AE013599-2300|AAM68503.1|  459|Drosophila melanogaster CG4905-PD...    28   6.7  
AE013599-2299|AAM68502.1|  459|Drosophila melanogaster CG4905-PC...    28   6.7  
AE013599-2298|AAM68501.1|  514|Drosophila melanogaster CG4905-PB...    28   6.7  
AE013599-2297|AAF57987.2|  514|Drosophila melanogaster CG4905-PA...    28   6.7  
AE013599-2296|AAO41368.1|  519|Drosophila melanogaster CG4905-PE...    28   6.7  

>BT016086-1|AAV36971.1|  730|Drosophila melanogaster LD44003p
           protein.
          Length = 730

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 143 SQQTADISVSEIGIWFIVLIHWQI*NLV 60
           SQ  A  S  +IG+W  +  HWQI +LV
Sbjct: 344 SQLVALSSSGKIGVWHAMTQHWQIQDLV 371


>AY094895-1|AAM11248.1|  514|Drosophila melanogaster RE68725p
           protein.
          Length = 514

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 435 MMTPIEEKKDE--KXRXGMVXVSE 500
           M TPIEEK D+  K R GMV VS+
Sbjct: 7   MATPIEEKLDQNLKVRTGMVHVSD 30


>AF277389-1|AAG17398.1|  469|Drosophila melanogaster
           gamma-syntrophin-like protein SYN2 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 435 MMTPIEEKKDE--KXRXGMVXVSE 500
           M TPIEEK D+  K R GMV VS+
Sbjct: 7   MATPIEEKLDQNLKVRTGMVHVSD 30


>AE014297-1048|AAF54457.1|  730|Drosophila melanogaster CG9467-PA
           protein.
          Length = 730

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 143 SQQTADISVSEIGIWFIVLIHWQI*NLV 60
           SQ  A  S  +IG+W  +  HWQI +LV
Sbjct: 344 SQLVALSSSGKIGVWHAMTQHWQIQDLV 371


>AE013599-2300|AAM68503.1|  459|Drosophila melanogaster CG4905-PD,
           isoform D protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 435 MMTPIEEKKDE--KXRXGMVXVSE 500
           M TPIEEK D+  K R GMV VS+
Sbjct: 7   MATPIEEKLDQNLKVRTGMVHVSD 30


>AE013599-2299|AAM68502.1|  459|Drosophila melanogaster CG4905-PC,
           isoform C protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 435 MMTPIEEKKDE--KXRXGMVXVSE 500
           M TPIEEK D+  K R GMV VS+
Sbjct: 7   MATPIEEKLDQNLKVRTGMVHVSD 30


>AE013599-2298|AAM68501.1|  514|Drosophila melanogaster CG4905-PB,
           isoform B protein.
          Length = 514

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 435 MMTPIEEKKDE--KXRXGMVXVSE 500
           M TPIEEK D+  K R GMV VS+
Sbjct: 7   MATPIEEKLDQNLKVRTGMVHVSD 30


>AE013599-2297|AAF57987.2|  514|Drosophila melanogaster CG4905-PA,
           isoform A protein.
          Length = 514

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 435 MMTPIEEKKDE--KXRXGMVXVSE 500
           M TPIEEK D+  K R GMV VS+
Sbjct: 7   MATPIEEKLDQNLKVRTGMVHVSD 30


>AE013599-2296|AAO41368.1|  519|Drosophila melanogaster CG4905-PE,
           isoform E protein.
          Length = 519

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +3

Query: 435 MMTPIEEKKDE--KXRXGMVXVSE 500
           M TPIEEK D+  K R GMV VS+
Sbjct: 12  MATPIEEKLDQNLKVRTGMVHVSD 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,464,522
Number of Sequences: 53049
Number of extensions: 227940
Number of successful extensions: 251
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)