Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307B04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   2.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.6  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 366 RRKLSFRMLSSWYCRNLRRCRSSICK*ATERVE*ARPDRH 485
           R KL+   +  W+     R R  I   AT  V    P+R+
Sbjct: 256 RTKLTEARIQVWFSNRRARLRKQITSAATPLVRSYAPERY 295


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 389 HSEA*LPPPNALHPYYLWVEIK 324
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 389 HSEA*LPPPNALHPYYLWVEIK 324
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 389 HSEA*LPPPNALHPYYLWVEIK 324
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -2

Query: 235  TNVSTYKSDAGVETIKLELQENLISWISNGV 143
            T  +TYK D  +  + + L   +I+W   GV
Sbjct: 1315 TFTTTYKEDVTLPCLAVGLPPPVITWKIKGV 1345


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 335 PINNMGEVHLAEEVKLPNV 391
           P+N + EV L +EV+ PN+
Sbjct: 575 PLNAIVEVVLVDEVQSPNL 593


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 335 PINNMGEVHLAEEVKLPNV 391
           P+N + E+ L +EV+ PN+
Sbjct: 575 PLNAIVEIVLVDEVQQPNL 593


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 504 YLYRNGGAGPVELIQLS 454
           Y Y NG AGP+ +   S
Sbjct: 94  YSYANGAAGPIPVSMAS 110


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 206 RSGNY*TRITRKPYFVDF 153
           RS  Y TR+  +PY   +
Sbjct: 375 RSNKYPTRVPHRPYVAQY 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,051
Number of Sequences: 336
Number of extensions: 2290
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)