Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307B03f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1119 + 10331275-10331330,10331343-10331462,10332023-10332164     30   0.98 
01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...    30   1.3  
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...    30   1.3  
01_03_0176 - 13461331-13461573,13464880-13465106,13465214-13465535     29   2.3  
06_03_0032 - 15697530-15697669,15699215-15699437,15699823-156999...    28   5.2  
11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851     27   6.9  

>07_01_1119 + 10331275-10331330,10331343-10331462,10332023-10332164
          Length = 105

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +1

Query: 205 TKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANEKADVLLQIPPVLK 354
           TK   KR    LH++K  KY+   ++    + ++A +K + +L +PP+LK
Sbjct: 53  TKGSLKRRT-ALHSIKKKKYEKTVQQRDPKDPSRATKKKNNILALPPLLK 101


>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 229 NQGLHALKTPKYKFLTKEELELEIAKANEKADVLL 333
           NQ  +   TPKY+F+T +++  +I  A    D+++
Sbjct: 39  NQDKNKYNTPKYRFVTNKDITAQIVYATIAGDIVM 73


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 229 NQGLHALKTPKYKFLTKEELELEIAKANEKADVLL 333
           NQ  +   TPKY+F+T +++  +I  A    D+++
Sbjct: 39  NQDKNKYNTPKYRFVTNKDITAQIVYATIAGDIVM 73


>01_03_0176 - 13461331-13461573,13464880-13465106,13465214-13465535
          Length = 263

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -1

Query: 218 RKTLVKSGRVNLFNRFCTFGVKNFGAGSCSPS*NDGT---MFNFRLDI 84
           R+  ++  R + FN FC + +K F  G  +P   + T   +F+F +D+
Sbjct: 188 RRNFLRGCRAHQFNEFCDYDLKLFIPGCTAPDVEEETFSVVFSFFVDV 235


>06_03_0032 -
           15697530-15697669,15699215-15699437,15699823-15699929,
           15700047-15700224,15700393-15700455,15700474-15700602,
           15701211-15701430,15702162-15702262,15702954-15703062,
           15705169-15705290,15705473-15705515,15705848-15705903,
           15705983-15706089,15706167-15706342,15706507-15706618,
           15706711-15706759,15707184-15707276,15707452-15707571,
           15707686-15707787,15709442-15709540,15710103-15710237,
           15710421-15710499,15710747-15710822,15710904-15710993,
           15711139-15711217,15711304-15711338,15711457-15711531,
           15712628-15713375
          Length = 1221

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/72 (20%), Positives = 31/72 (43%)
 Frame = +1

Query: 136 DPAPKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELELEIAKANE 315
           D   K F+ N+  LLK         +  +  + G H  K   +     +  E+E+  A++
Sbjct: 411 DRGEKHFSSNLSTLLKWSPFTTEDDLLNQFGDMGCHGTKLIVFNLWFNDAWEMELDFASD 470

Query: 316 KADVLLQIPPVL 351
           + D+++   P +
Sbjct: 471 EEDIMISGAPAM 482


>11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851
          Length = 364

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 102 EHCTIILRWRTRPGSKVFYTKCTESIKEIDSARFY 206
           EH T I+RW  R G K+   + T  IK +  +R Y
Sbjct: 173 EHLTSIIRWVHRNGPKI--NRSTLRIKRMQFSRIY 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,245,593
Number of Sequences: 37544
Number of extensions: 264320
Number of successful extensions: 550
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)