Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307B03f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021953-1|AAX51658.1| 393|Drosophila melanogaster GH07821p pro... 95 4e-20
AE014297-4192|AAF56757.1| 393|Drosophila melanogaster CG12261-P... 95 4e-20
M34394-1|AAA28976.1| 1275|Drosophila melanogaster protein ( D.me... 29 5.1
M21306-1|AAA56928.1| 1274|Drosophila melanogaster photoreceptor ... 29 5.1
BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p pro... 29 5.1
AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA... 29 5.1
BT010112-1|AAQ22581.1| 994|Drosophila melanogaster GH02902p pro... 28 8.8
AE014297-300|AAF51993.2| 994|Drosophila melanogaster CG2919-PA ... 28 8.8
>BT021953-1|AAX51658.1| 393|Drosophila melanogaster GH07821p
protein.
Length = 393
Score = 95.5 bits (227), Expect = 4e-20
Identities = 49/129 (37%), Positives = 77/129 (59%)
Frame = +1
Query: 112 PSFYDGEQDPAPKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELE 291
P+ E+DP P F Q LL+ +T+ + KV+RKR + + KF++ E+L+
Sbjct: 30 PAALQYERDPQPLFTDAETQRLLQSMTQLNLDKVYRKRTVPD----NSSETKFMSNEQLD 85
Query: 292 LEIAKANEKADVLLQIPPVLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIANEERII 471
E +A +LQ+PP+++I K ++ V+++D AL + SK++FTDITFG ER +
Sbjct: 86 NEFQNLVVRAQQILQMPPIVQIKKDVERVIAKDTALKDFANSKFVFTDITFGRRQSERKV 145
Query: 472 IERDTDGTL 498
I RD DGTL
Sbjct: 146 IVRDMDGTL 154
>AE014297-4192|AAF56757.1| 393|Drosophila melanogaster CG12261-PA
protein.
Length = 393
Score = 95.5 bits (227), Expect = 4e-20
Identities = 49/129 (37%), Positives = 77/129 (59%)
Frame = +1
Query: 112 PSFYDGEQDPAPKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELE 291
P+ E+DP P F Q LL+ +T+ + KV+RKR + + KF++ E+L+
Sbjct: 30 PAALQYERDPQPLFTDAETQRLLQSMTQLNLDKVYRKRTVPD----NSSETKFMSNEQLD 85
Query: 292 LEIAKANEKADVLLQIPPVLKIHKPIDEVLSRDPALIGYDTSKYLFTDITFGIANEERII 471
E +A +LQ+PP+++I K ++ V+++D AL + SK++FTDITFG ER +
Sbjct: 86 NEFQNLVVRAQQILQMPPIVQIKKDVERVIAKDTALKDFANSKFVFTDITFGRRQSERKV 145
Query: 472 IERDTDGTL 498
I RD DGTL
Sbjct: 146 IVRDMDGTL 154
>M34394-1|AAA28976.1| 1275|Drosophila melanogaster protein (
D.melanogaster trp proteingene, complete cds. ).
Length = 1275
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 FYDGEQDPAPKFFTPNVQNLLKRL--TRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELE 291
F DG P P PN++ L K L RP TK F +++ + L K L + +
Sbjct: 688 FEDGGTIPPPFNLCPNMKMLRKTLGRKRPSRTKSFMRKSMERAQTLHDKVMKLLVRRYIT 747
Query: 292 LE 297
E
Sbjct: 748 AE 749
>M21306-1|AAA56928.1| 1274|Drosophila melanogaster photoreceptor
membrane-associatedprotein protein.
Length = 1274
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 FYDGEQDPAPKFFTPNVQNLLKRL--TRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELE 291
F DG P P PN++ L K L RP TK F +++ + L K L + +
Sbjct: 687 FEDGGTIPPPFNLCPNMKMLRKTLGRKRPSRTKSFMRKSMERAQTLHDKVMKLLVRRYIT 746
Query: 292 LE 297
E
Sbjct: 747 AE 748
>BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p
protein.
Length = 620
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 FYDGEQDPAPKFFTPNVQNLLKRL--TRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELE 291
F DG P P PN++ L K L RP TK F +++ + L K L + +
Sbjct: 33 FEDGGTIPPPFNLCPNMKMLRKTLGRKRPSRTKSFMRKSMERAQTLHDKVMKLLVRRYIT 92
Query: 292 LE 297
E
Sbjct: 93 AE 94
>AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA
protein.
Length = 1275
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 118 FYDGEQDPAPKFFTPNVQNLLKRL--TRPDFTKVFRKRNNQGLHALKTPKYKFLTKEELE 291
F DG P P PN++ L K L RP TK F +++ + L K L + +
Sbjct: 688 FEDGGTIPPPFNLCPNMKMLRKTLGRKRPSRTKSFMRKSMERAQTLHDKVMKLLVRRYIT 747
Query: 292 LE 297
E
Sbjct: 748 AE 749
>BT010112-1|AAQ22581.1| 994|Drosophila melanogaster GH02902p
protein.
Length = 994
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 136 DPAPKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHAL-KTPKYKFLTKEELELEIAKAN 312
DP+PK T N L+++ R + K+F + + L K+ + + E + A+
Sbjct: 739 DPSPKELTQNRIRLIEQRVRDEMAKLFAAELKRFTNRLQKSEERSQCLQREYQTVCAELQ 798
Query: 313 EK-ADVLLQIPPVLKIHKPIDEVLS 384
++ +V L +L + IDE+L+
Sbjct: 799 QRQTEVDLLKQTILAERENIDEILA 823
>AE014297-300|AAF51993.2| 994|Drosophila melanogaster CG2919-PA
protein.
Length = 994
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 136 DPAPKFFTPNVQNLLKRLTRPDFTKVFRKRNNQGLHAL-KTPKYKFLTKEELELEIAKAN 312
DP+PK T N L+++ R + K+F + + L K+ + + E + A+
Sbjct: 739 DPSPKELTQNRIRLIEQRVRDEMAKLFAAELKRFTNRLQKSEERSQCLQREYQTVCAELQ 798
Query: 313 EK-ADVLLQIPPVLKIHKPIDEVLS 384
++ +V L +L + IDE+L+
Sbjct: 799 QRQTEVDLLKQTILAERENIDEILA 823
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,833,991
Number of Sequences: 53049
Number of extensions: 474687
Number of successful extensions: 1013
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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