Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307B02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    89   6e-20
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    23   6.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.2  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 89.4 bits (212), Expect = 6e-20
 Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
 Frame = +1

Query: 79  VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFP-RAVFLKVDVDRC 255
           ++++   F  ++  AG +LVVVDF ATWC PC+ IAP  E+   K+  + V +KVDVD C
Sbjct: 4   MVKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDEC 63

Query: 256 ADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQY 381
            + A+   +++MPTF+F + +  + +  G N   LEN ++Q+
Sbjct: 64  EELAAQYNIASMPTFLFIKRKEVVGQFSGANAEKLENFIQQH 105


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 140 TTNLVPALAISVW 102
           TT LVP L I VW
Sbjct: 180 TTGLVPLLGIDVW 192


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 340  GGNTTVLENKVRQYYGSDVAEEDEDNTVAGHMDLIT 447
            GG   V+E  +  +  +   +EDE+N + G +  +T
Sbjct: 1566 GGGGGVVEETISSFKENIFLKEDENNFMRGEVPRMT 1601


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,264
Number of Sequences: 2352
Number of extensions: 7901
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)