Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307B01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.71 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 246 RSGNKECPTCRKKLVSKRSLRPDPNFDLLISK--IYPSRDEYEAH 374
           +S N   P+C +   +    RPDP  +L+I++  I  S+  Y  H
Sbjct: 247 KSLNFRTPSCLETFHTLEKCRPDPPQNLVINESIIDLSQQTYNVH 291


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 8   IYWQNVFNRAFAK*NMGAIPLRVT 79
           +Y   VFN  F + ++  +P+ VT
Sbjct: 309 VYLAIVFNGLFTEEDVADVPINVT 332


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +3

Query: 234 ITALRSGNKECPTCRKKLVSKRSLRPDP 317
           IT   SGN    TCR  L  +   R +P
Sbjct: 486 ITVNNSGNNRMGTCRIFLAPQFDERGNP 513


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 309 PDPNFDLLISKIYPSRDEYEAHQELV 386
           P+P      +K +P+ + Y  HQ  V
Sbjct: 353 PNPQQQYYYNKNHPNSENYINHQNYV 378


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 309 PDPNFDLLISKIYPSRDEYEAHQELV 386
           P+P      +K +P+ + Y  HQ  V
Sbjct: 301 PNPQQQYYYNKNHPNSENYINHQNYV 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,482
Number of Sequences: 336
Number of extensions: 2647
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)