Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307B01f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 2e-30
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 54 9e-08
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028) 54 9e-08
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 52 4e-07
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019) 49 2e-06
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 48 4e-06
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048) 47 8e-06
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 47 8e-06
SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07) 47 1e-05
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 46 1e-05
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 46 1e-05
SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10) 46 3e-05
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 45 4e-05
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 44 6e-05
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 44 6e-05
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 44 6e-05
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 44 8e-05
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 44 1e-04
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 43 1e-04
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 43 1e-04
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 43 2e-04
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 41 7e-04
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 40 0.001
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 40 0.001
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 40 0.002
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 40 0.002
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 39 0.003
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 39 0.003
SB_31664| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 38 0.005
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 38 0.005
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 38 0.007
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 38 0.007
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 37 0.009
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 37 0.009
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 36 0.015
SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064) 36 0.015
SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029) 36 0.015
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 36 0.015
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 36 0.020
SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046) 36 0.027
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 36 0.027
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 35 0.035
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 35 0.035
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 35 0.047
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 35 0.047
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 34 0.062
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 34 0.062
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082
SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4) 33 0.11
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 33 0.14
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 33 0.14
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 33 0.14
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 33 0.19
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 33 0.19
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 33 0.19
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 33 0.19
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 33 0.19
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 33 0.19
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 33 0.19
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 33 0.19
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 32 0.25
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 32 0.25
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 32 0.33
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 32 0.33
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 31 0.44
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 31 0.44
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_57279| Best HMM Match : Adeno_E3A (HMM E-Value=8.6) 31 0.58
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 31 0.58
SB_48665| Best HMM Match : CM1 (HMM E-Value=2.5) 31 0.58
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 31 0.58
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 31 0.58
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 31 0.58
SB_12918| Best HMM Match : Adeno_E3A (HMM E-Value=8.6) 31 0.58
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 31 0.76
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91) 31 0.76
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 31 0.76
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 31 0.76
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 29 1.8
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 29 1.8
SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22) 29 3.1
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39) 28 4.1
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 28 4.1
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 28 5.4
SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11) 28 5.4
SB_31078| Best HMM Match : PHD (HMM E-Value=7.4e-09) 28 5.4
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 28 5.4
SB_28408| Best HMM Match : Ran_BP1 (HMM E-Value=4.6) 27 7.1
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 27 7.1
SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28) 27 7.1
SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09) 27 9.4
SB_45154| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 27 9.4
SB_34279| Best HMM Match : PAN (HMM E-Value=0.56) 27 9.4
SB_11546| Best HMM Match : DUF1407 (HMM E-Value=1.2) 27 9.4
>SB_35350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 128 bits (310), Expect = 2e-30
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +3
Query: 255 NKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNS 434
NKECPTCRKKLVSKRSLRPDPNFD LI+KIYP R+EYEAHQE VL +LS H+Q +L +S
Sbjct: 19 NKECPTCRKKLVSKRSLRPDPNFDALIAKIYPDREEYEAHQEKVLQRLSKHHNQQALTSS 78
Query: 435 ITEGIKLQSQNRPQRSRKNHDE 500
I EG+KLQ+ NR QR RK E
Sbjct: 79 IEEGLKLQAMNRAQRVRKRSSE 100
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 53.6 bits (123), Expect = 9e-08
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +3
Query: 120 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
A + R + SEL CP+C ++L T+ C +C++CI T L +ECPTC + VS
Sbjct: 47 AKADRKVPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTCGAESVSPD 106
Query: 300 SL 305
SL
Sbjct: 107 SL 108
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 53.6 bits (123), Expect = 9e-08
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Frame = +3
Query: 108 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRK 281
ATE +S + EL CP+CL+ LK+ C H C C+ +G KE CPTCR+
Sbjct: 2 ATESHLS-QVFSEELTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCRR 60
Query: 282 K-LVSKRSLRPDPNFDLLIS--KIYPSRDE-YEAHQELVLAKLSMSHSQASLVNSITEGI 449
L+ ++ P +L+ + P R E E H+ L K + + + +
Sbjct: 61 STLIPDGGVKALPTNTILVRLLEATPGRKERIEIHKALEKGK-PVVEEMTRKIRKLDTYL 119
Query: 450 KLQSQNRPQRSRKNHDES 503
S N + HDE+
Sbjct: 120 DSMSVNCQLTEERIHDEA 137
>SB_54922| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0028)
Length = 116
Score = 53.6 bits (123), Expect = 9e-08
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +3
Query: 120 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
A + R + SEL CP+C ++L T+ C +C++CI T L +ECPTC + VS
Sbjct: 47 AKADRKVPSELRCPMCKNLLTDTVLIPCCGTSYCDECIRTYLLENEQECPTCGAESVSPD 106
Query: 300 SL 305
SL
Sbjct: 107 SL 108
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK--ECPTCRKK-LVSKRS 302
R+L+ EL C +C ++ T CLH FC +C+ L +K CP CRKK V +R
Sbjct: 60 RALNDELRCSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRKKTAVPRRG 119
Query: 303 LRPDP 317
++ P
Sbjct: 120 VKGLP 124
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLRPDP- 317
E C ICLD+L+K +++K C H C+DC +A G K CP C++ L L+ P
Sbjct: 316 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAPL 374
Query: 318 -NFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITE 443
LL P R A+ + A + + +L + E
Sbjct: 375 VLIQLLEGHPCPPRKRQRANSPVPAAAVVLDPQTRTLEQMLNE 417
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 141 HSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLRPD 314
+ E C ICLD+L+K +++K C H C+DC +A G K CP C++ L LR
Sbjct: 20 NEEFHCAICLDVLEKPLSSK-CQHSCCSDCWESAFDLGEKHPACPICQETLADPNDLRRA 78
Query: 315 P 317
P
Sbjct: 79 P 79
>SB_33464| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0019)
Length = 413
Score = 49.2 bits (112), Expect = 2e-06
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI-ITALRSGNKECPTCRKKLVSKRSLRPD 314
L E+ CPIC ++ + C H C C+ + G +CP CRKK
Sbjct: 16 LQEEICCPICTEIFETPKCLPVCAHNVCLSCLKKMKIEQGFIKCPICRKKTKITNPAESL 75
Query: 315 PNFDLLISKI--YPSR-DEYEAHQELVLAK--LSMSHSQASLVNSITEGIKLQSQNRPQR 479
P LL+ + P R +E E +EL AK L + + S + + + N +
Sbjct: 76 PTNSLLVRLVENAPGRKEELELRKELKTAKRVLDAKLKKVLSIFSTYQSLSREILNHAET 135
Query: 480 SRKNHDESSNA 512
+KN E +++
Sbjct: 136 MQKNIKEQADS 146
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLRPDP 317
E C ICLD+L+K +++K C H C+DC +A G K CP C++ L L+ P
Sbjct: 169 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGGKHPACPICQETLADPNDLQRAP 226
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLRPDP 317
E C ICLD+L+K +++K C H C+DC +A G K CP C++ L L+ P
Sbjct: 165 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 222
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLRPDP 317
E C ICLD+L+K +++K C H C+DC +A G K CP C++ L L+ P
Sbjct: 73 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 130
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLRPDP 317
E C ICLD+L+K +++K C H C+DC +A G K CP C++ L L+ P
Sbjct: 171 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQRAP 228
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 47.6 bits (108), Expect = 6e-06
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR---S 302
+ L+ ++C +C L T ECLH FC CI++ L++ + CP C ++ R +
Sbjct: 1358 KDLNPHIICVLCGGYLVDATTIVECLHSFCRSCIVSWLQA-SYHCPVCDTEVHKTRPFLN 1416
Query: 303 LRPDPNFDLLISKIYP 350
+RPD ++ K+ P
Sbjct: 1417 IRPDCVLQDIVYKLVP 1432
>SB_14207| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0048)
Length = 233
Score = 47.2 bits (107), Expect = 8e-06
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 90 QEVITDAT-EIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKEC 266
+E++TD T + + + C C D++ +TTK CLH C C+ + ++ C
Sbjct: 82 EELLTDTTLDYTAFHQKVEELFACVCCQDLVLYPVTTK-CLHNICKGCLQRSFKAEVFTC 140
Query: 267 PTCRKKLVSKRSLRPDPNFDLLISKIYP 350
P CR L L + D +++ ++P
Sbjct: 141 PYCRTDLGKTYKLSVNSALDAILNDLFP 168
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLR 308
E C ICLD+L+K +++K C H C+DC +A G K CP C++ L L+
Sbjct: 313 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQ 367
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE--CPTCRKKLVSKRSLR 308
E C ICLD+L+K +++K C H C+DC +A G K CP C++ L L+
Sbjct: 639 EFHCAICLDVLEKPLSSK-CQHSCCSDCWKSAFELGEKHPACPICQETLADPNDLQ 693
>SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07)
Length = 137
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSK 296
+CP+C D+ + KEC HR C C T RS +CP C L K
Sbjct: 54 LCPVCEDIFVSPVQIKECGHRLCQHCYKTIWRSPEPKCPKCSGDLDDK 101
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCR 278
CPICL+ + T + C H FC CI A +S +K CPTCR
Sbjct: 678 CPICLETITYPETLQGCGHTFCRPCITEASKS-SKLCPTCR 717
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCR 278
CPICL+ + T + C H FC CI A +S +K CPTCR
Sbjct: 753 CPICLETITYPETLQGCGHTFCRPCITEASKS-SKLCPTCR 792
>SB_31116| Best HMM Match : zf-C3HC4 (HMM E-Value=5.6e-10)
Length = 169
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTC 275
L+ + C +C L K T ECLH FC CI+T L+ S + CP+C
Sbjct: 58 LNPFITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSC 104
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITAL-RSGNK---ECPTCRKKL 287
R L +LMCP+CL K M + C H FC C+ L +SG K +CP CR ++
Sbjct: 12 RGLAEQLMCPVCLGEYKNPMLLR-CYHSFCLRCVQELLHQSGEKGVVKCPQCRTEM 66
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVS--KRSLRPDPN 320
+ CPICL +L + + C H FC C ++ N +CP CR ++ S +R+ R
Sbjct: 34 DFTCPICLQLLVEPVVLP-CEHEFCKMCFTQNVQEANLQCPMCRIRISSWARRNARNGTL 92
Query: 321 FDL----LISKIYPSRDE 362
D I K++P R E
Sbjct: 93 VDRKRWDRIKKLFPKRCE 110
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG--NKECPTCRKKLVSKRSLRPDP 317
E C ICLD+L K +++K C H C+DC +A G + CP C + L L+ P
Sbjct: 115 EFHCAICLDVLGKPLSSK-CQHSCCSDCWKSAFELGETHPACPICHETLADPNDLQRAP 172
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG--NKECPTCRKKLVSKRSLRPDP 317
E C ICLD+L K +++K C H C+DC +A G + CP C + L L+ P
Sbjct: 115 EFHCAICLDVLGKPLSSK-CQHSCCSDCWKSAFELGETHPACPICHETLADPNDLQHAP 172
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 44.4 bits (100), Expect = 6e-05
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +3
Query: 123 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR- 299
+S + L+ ++C +C L T ECLH FC CI+ L + + CP C ++ R
Sbjct: 5 LSLKELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYR-CPVCDAEIHKTRP 63
Query: 300 --SLRPDPNFDLLISKIYP 350
++R D ++ K+ P
Sbjct: 64 LLNIRADNVLQDIVYKVVP 82
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 126 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRS--GNKECPTCRKK 284
S + EL C +CL+ ++ C H FC +C+ +S GN CPTCR K
Sbjct: 12 SIEKVREELTCSVCLEQFREPKMLP-CFHTFCKECLEKTKQSFRGNLLCPTCRTK 65
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCR---KKLVSKRSLRPDPNFD 326
C +C ++L + +T+ C H FC DC+ +L ECP CR K++++R D
Sbjct: 330 CKLCFNLLLEPVTSL-CGHSFCRDCLYRSL-DHRVECPCCRAPLTKILAERRQAVTSVLD 387
Query: 327 LLISKIYPSRDEYEAHQELVLAKLSMSHSQ 416
+I +P +YE + L A++ S+
Sbjct: 388 GMIKDFFPV--QYEKRKNLYAAEMEELRSK 415
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCRKKL-VSKRS 302
++ E+ CPIC + ++ +C H C +C++ + ECP CR + V K
Sbjct: 18 NIQDEISCPICYEDFEEPKCLPKCAHNICRECLLGIIEKAQLERFECPICRAIVAVPKDG 77
Query: 303 LRPDPNFDLLISKI--YPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNR 470
+ P LL+ + P R E +A ++ + L+ + + + ++S +
Sbjct: 78 IDGFPTNSLLVRLVENAPGRKEKQAIKQAMTDYLNTKAFAEKSIKELRVQVGVESSKK 135
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 123 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRS 302
+S + L+ ++C +C L T ECLH FC CI+ L + + CP C ++ R
Sbjct: 37 LSLKELNPHIICVLCGGYLVDATTIIECLHSFCRCCIVRYLETSYR-CPVCDAEIHKTRP 95
Query: 303 L 305
L
Sbjct: 96 L 96
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 43.2 bits (97), Expect = 1e-04
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGN-KECPTCR-KKLVSKRSL 305
L E CP+C+++ ++ + C H C +C+ ITA S ECP CR + + + +
Sbjct: 16 LGDEGACPVCIEVFEEPKSLPSCAHNVCRECLEKITARNSSRFVECPICRARSEIPQNGV 75
Query: 306 RPDPNFDLLISKI--YPSRDEYEA-HQELVLAKLSMSHSQ--ASLVNS 434
P LL+ I P E +A L AK S+ ++ +VNS
Sbjct: 76 NSFPTNTLLVRIIENTPGGKEQKAIKSALKKAKESLEEARNYREMVNS 123
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITAL-RSGNKECPTCRKKLVS 293
+ L+C IC+ +L+ +TT C H FC C+ T L R + CP+CR ++S
Sbjct: 12 IDQNLLCNICVGVLENAITT-ICGHSFCESCLETWLSRPEVQSCPSCRSHVLS 63
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCI-ITALRSGNK--ECPTCRKKL 287
EL+CPICLD K+ T C+H C C+ A R ++ CP CR ++
Sbjct: 18 ELLCPICLDEFKEPKTL-SCMHDLCRKCLEDMAARESSRVIRCPLCRSEI 66
>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 158
Score = 40.7 bits (91), Expect = 7e-04
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 275
R + L CP C K + TK C H FC +C+ T + ++CP C
Sbjct: 98 RQYKARLTCPCCNTRKKDAILTK-CFHVFCYECLKTRYDTRQRKCPKC 144
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG----NKECPTCRKKLVSKR 299
RS H CPIC K CLH +C+DC+ +RS +CP C + +
Sbjct: 651 RSAHESSCCPICSRPFKSPKILP-CLHTYCSDCVKEIVRSRLGKLTLQCPKCPRSVDIPD 709
Query: 300 SLRPD 314
PD
Sbjct: 710 PFTPD 714
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCII-TALRSGNKE--CPTCRKK 284
++ E CP+CL+ + + C H C C+ A S +KE CP CRK+
Sbjct: 17 INDECSCPVCLEDFLEPKSLPNCAHNVCRKCLEGMATDSESKEIRCPVCRKE 68
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 275
+ L CP C K + TK C H FC +C+ T + ++CP C
Sbjct: 350 ARLTCPCCNTRKKDAILTK-CFHVFCYECLKTRYDTRQRKCPKC 392
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCII-TALR---SGNKECPTCR 278
L E+ CPICL+ K CLH FC +C++ A R G CP C+
Sbjct: 10 LQKEVECPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCK 59
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCII-TALR---SGNKECPTCR 278
L E+ CPICL+ K CLH FC +C++ A R G CP C+
Sbjct: 10 LQKEVECPICLERFKDPRVLP-CLHTFCYECLVGLASRYKTEGKWPCPQCK 59
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGN-KECPTCR-KKLVSKRSL 305
L E CP+C+++ + + C H C +C+ IT S ECP CR + + + +
Sbjct: 16 LGDEGACPVCIEVFVEPKSLPSCAHNVCRECLEKITKRNSIRFVECPICRARSEIPQNGV 75
Query: 306 RPDPNFDLL---ISKIYPSRDEYEAHQELVLAKLSMSHSQ--ASLVNS 434
P LL I I +++ L AK S+ ++ +VNS
Sbjct: 76 NSFPTNTLLVRIIENIQGRKEQKAIKSALKKAKESLEEARNYREMVNS 123
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNKECPTCRKKLV 290
E+ CP+CL++ ++ + C H C C+ +T + CP CR + V
Sbjct: 20 EISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVCRSESV 69
>SB_31664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKK-TMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
SL ++C ICL+ ++K T EC H C++ LRS CP CR+ LVS +
Sbjct: 20 SLEEPILCSICLEEVQKETSAELECGHGNHLKCVLR-LRSAT--CPVCRRPLVSDK 72
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 141 HSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK--ECPTCR 278
H L+C IC + CLH FC +C+ ++RS + CPTC+
Sbjct: 12 HYRLVCGICQETYNNPKVLP-CLHSFCQNCLDKSIRSQERVLVCPTCQ 58
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGN--KECPTCR 278
CPICLD L T+ C H FC C+ + + CP CR
Sbjct: 65 CPICLDPLDDPSITR-CAHVFCTGCLTDVIENEGLAPRCPMCR 106
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRS 302
C ICL+ C H+ DC + +R+G + CP CR L + S
Sbjct: 1985 CCICLEDAFTGCQVLACSHKVHRDCAVAMVRNGVRNCPICRHPLYTTTS 2033
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNKECPTCR 278
L CP+C +M CLH FC C+ + RS CP+CR
Sbjct: 143 LFCPLCHEMFANPRLLP-CLHTFCKRCLENLVPPRSHTLSCPSCR 186
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +3
Query: 87 PQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDC 230
P V+T ++A ++C C + L EC+ C DC
Sbjct: 201 PNFVVTTMIDVAAVRNHDQKPILCSSCEEKLPAAARCIECMDFLCYDC 248
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCRKKL 287
CPICL +K +TK+ C H F CI+ L N CP CR +L
Sbjct: 62 CPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTN-SCPVCRHEL 106
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCR 278
+ E C +C ++ + TT C H FC C+ + LR N CP CR
Sbjct: 365 MEDEFSCIVCQELFIRA-TTLTCSHSFCEYCLQSWLRKRN-TCPICR 409
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE---CPTCRKKLVSKRSLRPD 314
S++ C +CL+ + CLH +C C+ + + + CP CR+K+V D
Sbjct: 13 SDVTCSLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVKD 71
Query: 315 PNFDLLIS 338
D +++
Sbjct: 72 LKVDFMLN 79
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE---CPTCRKKLVSKRSLRPD 314
S++ C +CL+ + CLH +C C+ + + + CP CR+K+V D
Sbjct: 13 SDVTCSLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEVKD 71
Query: 315 PNFDLLIS 338
D +++
Sbjct: 72 LKVDFMLN 79
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALR---SGNKECP--TCRKKLVS 293
+ CPIC + + T++C HRFC C+ LR S +K P C++ ++S
Sbjct: 39 DYQCPICQLPFRDPVQTRDCGHRFCESCLEPILRRCISRDKVYPDKACKRTVLS 92
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
+ +C +C ++ + C H C+ C N++CP CR++ + L+ + +
Sbjct: 53 DFICNVCGTVMLVPVVMPNCGHSCCSSCAERV----NRKCPECREEFGATAELKENISLK 108
Query: 327 LLISKIYP--SRDEYEAHQELVLAKLSMSHSQASL---VNSITEGIKLQSQNRPQRSR 485
+I ++ R + LVL L + S+ ++ +G+ L N +RSR
Sbjct: 109 RIIRRLQGKCKRCPFNGELGLVLDHLCPERERQSVRTQAATLRDGLNLHLTNCEERSR 166
>SB_23234| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 349
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
+ +C +C ++ + C H C+ C N++CP CR++ + L+ + +
Sbjct: 53 DFICNVCGTVMLVPVVMPNCGHSCCSSCAERV----NRKCPECREEFGATAELKENISLK 108
Query: 327 LLISKIYP--SRDEYEAHQELVLAKLSMSHSQASL---VNSITEGIKLQSQNRPQRSR 485
+I ++ R + LVL L + S+ ++ +G+ L N +RSR
Sbjct: 109 RIIRRLQGKCKRCPFNGELGLVLDHLCPERERQSVRTQAATLRDGLNLHLTNCEERSR 166
>SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029)
Length = 232
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVS 293
+ CPIC ++L K + T H C C+ AL + N CP C+ L S
Sbjct: 83 DFYCPICCELLDKPVET-IFTHNACGACLTQAL-AVNSSCPVCKTILSS 129
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +3
Query: 147 ELMCPICLDML-----KKTMTTKECLHRFCNDCI--ITALRSGNKECPTCRKKLVSKRSL 305
+L CP+C ++ +C H FC +CI I L+ ECPTC+ + + S+
Sbjct: 327 DLTCPLCYTAYGTGYPQRIPRILDCSHTFCTECIMKIKELQGDVVECPTCKLRTLLTSSV 386
Query: 306 R-PDPNFDLLISKIYPSRDE 362
N D+L + ++E
Sbjct: 387 DCLKKNMDILTAVFAAEQEE 406
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C IC++ L CLH FC C+ + + G CP C+ +
Sbjct: 7 RRLEDEVTCSICIEHLNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 300 SLRPDPNFDLLISKI 344
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046)
Length = 488
Score = 35.5 bits (78), Expect = 0.027
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 150 LMCPICLDMLKK-TMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
++C ICL+ ++K T EC H C++ LRS CP CR+ LVS +
Sbjct: 288 ILCSICLEEVQKETSVELECGHGNHLKCVLR-LRSAT--CPVCRRPLVSDK 335
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/90 (24%), Positives = 35/90 (38%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
E C +C + +TT C H FC C+ +L CP CR L ++ +
Sbjct: 376 EFECTLCCRLFYNPVTTP-CGHVFCRACLNRSL-DHRPGCPICRSSLTQNVTVAIEMLLK 433
Query: 327 LLISKIYPSRDEYEAHQELVLAKLSMSHSQ 416
K Y R +LA ++ + S+
Sbjct: 434 TFFPKDYEDRKLQHEEDMAMLASIASNTSE 463
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 35.1 bits (77), Expect = 0.035
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCRKKL 287
S++ C +CL+ + CLH +C C+ + + + CP CR+K+
Sbjct: 22 SDVTCSLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSKECTVSCPQCREKI 71
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 35.1 bits (77), Expect = 0.035
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 114 EIAVSP-RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
E+A S R L E+ C +C++ CLH FC C+ + + G CP C+
Sbjct: 120 EMATSASRRLEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGKGKLVCPLCK 178
Query: 279 KKLVSKRSLRPDPNFDLLISKI 344
+ + P + +I+ I
Sbjct: 179 SEFQISPADVPSLKVNFMINSI 200
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-------CPTCRKKL 287
L+C IC ++L++ + T C H FC C+ T + + +E CP+CR L
Sbjct: 16 LLCGICAEVLERAVLTP-CGHSFCGVCLETWMNAKLEENEKCPASCPSCRADL 67
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 34.7 bits (76), Expect = 0.047
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 96 VITDATEIAV-SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDC---IITALRSGNKE 263
+ DAT S + +L C IC +L+ CLH +C C II +S
Sbjct: 124 IYEDATHRETGSQDDIRQQLACGICHALLRDARVLP-CLHTYCRRCIEDIILHRQSVRAH 182
Query: 264 CPTCRKKL 287
CP+C +++
Sbjct: 183 CPSCNREI 190
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 34.3 bits (75), Expect = 0.062
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI 233
L E CPIC + + +EC HRFC C+
Sbjct: 20 LPEEYECPICQLAFRDPIQIEECGHRFCQSCL 51
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 34.3 bits (75), Expect = 0.062
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 108 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
A+ + V P L + +C C +L + K C HR C C T L S + CP C +L
Sbjct: 417 ASNLFVYP--LQKKYICLDCEGLLWYPVQIKPCGHRVCTKC-YTKLLSSSARCPGCMDEL 473
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 34.3 bits (75), Expect = 0.062
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C IC++ CLH FC C+ + + G CP C+ +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 300 SLRPDPNFDLLISKI 344
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 159 PICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
P C L K + + C H FC DC I+ + CP CR ++
Sbjct: 484 PTCQVKLAKQIMLRTCKHIFCEDC-ISLWFDREQTCPMCRARV 525
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCRKKL 287
S++ C +CL + CLH +C C+ + + + CP CR+K+
Sbjct: 13 SDVTCSLCLGQYQDPRVLA-CLHTYCRHCLESLVEHSKECTVSCPQCREKI 62
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 33.9 bits (74), Expect = 0.082
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE----CPTCRKKL 287
+L L C C ++ K T CLH FC +C+ RS + CPTC+ ++
Sbjct: 9 NLEELLTCRQCSNVFKNPRITP-CLHSFCAECLNEIARSRPYQAYIACPTCKYEI 62
>SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4)
Length = 402
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = +3
Query: 78 HRTPQEVITDATEIA---VSPRSL-HSE 149
HRTPQE +T ATE+A +SPRS HS+
Sbjct: 233 HRTPQEALTSATEVAFTFISPRSFDHSK 260
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCII--TALRSGNKE---CPTCRKKL 287
SL E C +C + K C H FCN+C+ +A G+ E CP+C+ ++
Sbjct: 91 SLRQEAECSLCHKTPSEPKILK-CFHTFCNECLTEKSAEFKGDGETFSCPSCKTRI 145
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C +C++ CLH FC C+ + + G CP C+ +
Sbjct: 7 RRLEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 300 SLRPDPNFDLLISKI 344
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +3
Query: 114 EIAVSP-RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
E+A S R L E+ C IC++ CLH FC C+ + + G CP C+
Sbjct: 5 EMATSASRRLQDEVTCSICIEHFDDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCK 63
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 135 SLHSELMCPICLDML--KKTMTTKECLHRFCNDCII 236
++ + CP+CL L +K T C+H FC +CI+
Sbjct: 95 TMSNSAQCPVCLMSLSEQKLGTPNSCMHVFCLECIL 130
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
R L E+ C IC++ CLH FC C+ + + G CP C+
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
R L E+ C IC++ CLH FC C+ + + G CP C+
Sbjct: 7 RRLEGEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
R L E+ C IC++ CLH FC C+ + + G CP C+
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
R L E+ C IC++ CLH FC C+ + + G CP C+
Sbjct: 6 RRLEDEVTCSICIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCK 57
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C IC++ C H FC C+ + + G CP C+ +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 300 SLRPDPNFDLLISKI 344
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 32.7 bits (71), Expect = 0.19
Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C IC++ C H FC C+ + + G CP C+ +
Sbjct: 7 RRLEDEVRCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 300 SLRPDPNFDLLISKIYPSRD 359
+ P + +I + S D
Sbjct: 66 ADVPSLKVNFMILPLLTSDD 85
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C IC++ C H FC C+ + + G CP C+ +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 300 SLRPDPNFDLLISKI 344
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
+C IC + K + + C H C+ C+ G CP CR + +++ DP
Sbjct: 184 LCKICAEN-NKDVRIEPCGHLMCHLCLEQWQEKGGDGCPFCRSPIKDIQTVVVDP 237
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK---ECPTCRKKL 287
++ C +CL+ + CLH +C C+ + + + CP CR+K+
Sbjct: 13 DVTCCLCLEQYQDPRVLA-CLHTYCRHCLESLVEHSKECTVSCPQCREKI 61
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
+C IC + K + + C H C+ C+ G CP CR + +++ DP
Sbjct: 380 LCKICAEN-NKDVRIEPCGHLMCHLCLEQWQEKGGDGCPFCRSPMKDIQTVVVDP 433
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C IC++ C H FC C+ + + G CP C+ +
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 65
Query: 300 SLRPDPNFDLLISKI 344
+ P + +I+ I
Sbjct: 66 ADVPSLKVNFMINSI 80
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVSKR 299
R L E+ C IC++ C H FC C+ + + G CP C+ +
Sbjct: 6 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQISP 64
Query: 300 SLRPDPNFDLLISKI 344
+ P + +I+ I
Sbjct: 65 ADVPSLKVNFMINSI 79
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 153 MCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
+C ICLD K+ + C H + C+ L G + CP C++ + + +
Sbjct: 300 VCAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTEGKRTCPVCKRPVETSK 350
>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
Length = 63
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLR 308
+S+ ++ C IC++ + + C H C +C + L K CP C + S LR
Sbjct: 3 QSVTEKVKCLICMEPYTVPLVSISCWHVHCEECWLRTL-GAKKLCPQC-NMITSPNDLR 59
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
R L E+ C +C++ CLH FC C+ + + G CP C+
Sbjct: 7 RRLEDEVTCSLCIEHFNDPRVLP-CLHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCRKKLVS 293
R L E+ C IC++ C H FC C+ + + G CP C+ + S
Sbjct: 7 RRLQDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQS 63
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = +3
Query: 78 HRTPQEVITDATEIA---VSPRSL-HSE 149
HRTPQE +T ATE+A ++PRS HS+
Sbjct: 246 HRTPQEALTSATEVAFTFITPRSFDHSK 273
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 31.9 bits (69), Expect = 0.33
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +3
Query: 54 WELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI 233
W+L H P EI S + C +C K + TK CLH FC C
Sbjct: 212 WQLEREWEHGKPDSADPHQYEID-SDNEDNLPFACIMCRKTFKNPVVTK-CLHYFCEACA 269
Query: 234 ITALRSGNKECPTC 275
+ + N +C C
Sbjct: 270 LQHYKK-NSKCFVC 282
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI-ITALRSGNKE--CPTCR 278
+ L E+ C IC++ CLH FC C+ A SG + CP C+
Sbjct: 7 KQLEDEVTCAICIEHFTDPRLLP-CLHTFCRHCLEDLAEHSGKGKLVCPLCK 57
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNK-ECPTCRKKL 287
++ C +CL+ + CLH +C C+ + G+ CP CR+K+
Sbjct: 13 DVTCCLCLEQYQDPRVLA-CLHTYCRHCLESLAEHSQGDSISCPQCREKI 61
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
R L E+ C IC++ C H FC C+ + + G CP C+
Sbjct: 7 RRLEDEVTCSICIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGRGKLVCPLCK 58
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCI--ITALRSGNKECPTCR 278
+C +C + CLH FC +C+ + R G CP C+
Sbjct: 404 ICGVCRETYTDPRVAP-CLHSFCKECVTKLVTERQGKFVCPDCQ 446
>SB_57279| Best HMM Match : Adeno_E3A (HMM E-Value=8.6)
Length = 263
Score = 31.1 bits (67), Expect = 0.58
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 179
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 83 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 133
Query: 180 KKTMTTKECLHRFCNDCIITALRSGNKECP 269
K ++ L C+ I+ ALR N CP
Sbjct: 134 KNIQSSMIPLINHCS-IIVEALRKDN--CP 160
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 31.1 bits (67), Expect = 0.58
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 179
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 604 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 654
Query: 180 KKTMTTKECLHRFCNDCIITALRSGNKECP 269
K ++ L C+ I+ ALR N CP
Sbjct: 655 KNIQSSMIPLINHCS-IIVEALRKDN--CP 681
>SB_48665| Best HMM Match : CM1 (HMM E-Value=2.5)
Length = 632
Score = 31.1 bits (67), Expect = 0.58
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 179
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 131 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 181
Query: 180 KKTMTTKECLHRFCNDCIITALRSGNKECP 269
K ++ L C+ I+ ALR N CP
Sbjct: 182 KNIQSSMIPLINHCS-IIVEALRKDN--CP 208
>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 129 PRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRK--KLVSKRS 302
PR L L C +C ++ ++ CLH C C + R+ N C C KLV R
Sbjct: 33 PR-LRQSLSCRVCRGLVVDPFGSQSCLHYVCRGC-LRKKRALNPGCRWCLNLDKLVEDRQ 90
Query: 303 LR 308
+
Sbjct: 91 TK 92
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 129 PRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRK--KLVSKRS 302
PR L L C +C ++ ++ CLH C C + R+ N C C KLV R
Sbjct: 33 PR-LRQSLSCRVCRGLVVDPFGSQSCLHYVCRGC-LRKKRALNPGCRWCLNLDKLVEDRQ 90
Query: 303 LR 308
+
Sbjct: 91 TK 92
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 31.1 bits (67), Expect = 0.58
Identities = 24/80 (30%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Frame = +3
Query: 108 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-----CPT 272
A E + S L+C +C K CLH FC CI R + CP
Sbjct: 46 AAEKRANKLSKDPALICRVCNQRFNKPKLL-HCLHSFCQSCIEGLARKTEDDCLELICPV 104
Query: 273 CRKKLVSKRSLRPDP-NFDL 329
C RS+ P NF L
Sbjct: 105 CDSLGAIPRSVESLPTNFAL 124
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 31.1 bits (67), Expect = 0.58
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 179
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 580 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 630
Query: 180 KKTMTTKECLHRFCNDCIITALRSGNKECP 269
K ++ L C+ I+ ALR N CP
Sbjct: 631 KNIQSSMIPLINHCS-IIVEALRKDN--CP 657
>SB_12918| Best HMM Match : Adeno_E3A (HMM E-Value=8.6)
Length = 214
Score = 31.1 bits (67), Expect = 0.58
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 EYIGKMSSTEPSQNKTWELS--LYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 179
E + KMS++EP +K +EL + LHR ++ DA E+ +++ SE C +++
Sbjct: 5 EDLKKMSASEPCPHKEYELKRLTHFLHRV--DICFDAVEVT---KNVMSEQEC----ELI 55
Query: 180 KKTMTTKECLHRFCNDCIITALRSGNKECP 269
K ++ L C+ I+ ALR N CP
Sbjct: 56 KNIQSSMIPLINHCS-IIVEALRKDN--CP 82
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 31.1 bits (67), Expect = 0.58
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI----ITALRSGNKECPTCR 278
R L E+ C +C++ C H FC C+ + + G CP C+
Sbjct: 7 RRLEDEVTCSLCIEHFNDPRVLP-CFHSFCRHCLEELAVHSEGKGKLVCPLCK 58
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDC----IITALRSGNKECPTCRKKL 287
++ C +CLD+ CLH +C C + + G CP CR ++
Sbjct: 13 DVTCLLCLDIFTDPRLLP-CLHTYCKKCLEDLVSQCQKKGEIYCPQCRHEV 62
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 30.7 bits (66), Expect = 0.76
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK--ECPTCRKKL-VSKRSLR 308
L L C +C +++ CLH FC C+ + + CP C + VSK +LR
Sbjct: 14 LSKHLNCSLCHRLIRGPKLLP-CLHSFCLACLEDLVTENDVGFNCPQCHTEAKVSKAALR 72
Query: 309 PDP-NFDL 329
P NF L
Sbjct: 73 GLPTNFFL 80
>SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91)
Length = 399
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 123 VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRK 281
+S + L+ ++C +C L T ECLH + C T+ +EC + R+
Sbjct: 36 LSLKELNPHIICVLCGGYLVDATTIIECLHSWQITCFRTSCTKLYRECISVRE 88
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSL 305
L S CP+C D + + H C++C R CPTCR L S R+L
Sbjct: 31 LTSIFECPVCFDYVLPPILQCSSGHLVCSNC-----RPKLTCCPTCRGPLGSIRNL 81
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 30.7 bits (66), Expect = 0.76
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 HRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPD-PNFDLLISKIYPSRDEYEAHQELV 386
H FC+ C+ LR+ N+ CPTCR + + ++ + DL ++ +R E L
Sbjct: 120 HVFCSPCLDLWLRT-NRYCPTCRTPINQDQPVKKILGSMDLHMNSDAVTRVELR-RTRLE 177
Query: 387 LAKLSMSHSQASLVNSITEGIKLQSQNRPQR 479
L + SL N+I + +K++++ +R
Sbjct: 178 LIRQEYEDDIVSLQNTI-DRLKIENKRLHER 207
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 126 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIIT--ALRSGNKE--CPTCRK 281
SP+SL+ C C + + +CLH FC C+ T L +G CP CRK
Sbjct: 10 SPQSLN----CRACHKVFTEPKIL-DCLHTFCQKCLGTHDILGAGTNSIVCPLCRK 60
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +3
Query: 177 LKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSR 356
+KKT K + C LRS K C K L+ + N D L++ S+
Sbjct: 732 IKKTNNNKNTRSSSSSPCHAAPLRSSLKPCFKEPKSLIRTETRLAKHNNDSLVNIKQQSK 791
Query: 357 DEYEAHQELVLAKLSMSHSQASL 425
D++ + +L K + Q L
Sbjct: 792 DKHAGIRRELLKKRELRRKQREL 814
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSG-----NKECPTC 275
+CP C++ + CLH FC+ C+ L N CP C
Sbjct: 14 VCPKCMNAYENPKVLP-CLHTFCSQCLSEELHRDCEGRLNVTCPKC 58
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGN 257
L C IC +L++ + T C HR C C +LR N
Sbjct: 28 LDERFRCTICKHVLQEPLQTT-CGHRICESCFELSLRHLN 66
>SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Frame = +3
Query: 183 KTMTTKECLHRFCN---DCIITALRSGNKE------CPTCRKKLVSKRSLRPDPNFDLLI 335
K++ L R C DCI L +K+ CP C K V++RSL P+P ++
Sbjct: 197 KSLIPNSSLQRNCGREGDCINQVLEKSSKKSKNKWFCPLC-KTPVTRRSLTPNPKLANIV 255
Query: 336 SKIYPSRD 359
+ + +D
Sbjct: 256 AAVKNLQD 263
>SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 105 DATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFC 221
D + PR+ ++ CP+C+ + +T C H FC
Sbjct: 83 DEIQAPEPPRAFSNDRQCPVCITD-ARFLTMTNCGHEFC 120
>SB_41870| Best HMM Match : DUF963 (HMM E-Value=0.22)
Length = 233
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = -2
Query: 442 SVIELTREACEWDMLSLARTSSW*ASYSSLLG---YILDMSRSKLGSGRRERLDTNFFLQ 272
SV+ +R LA + S A+ S+L YIL SRS L +GR + + L
Sbjct: 80 SVLATSRSVLATSRSVLATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILA 139
Query: 271 VGHSLLPDLKAVIIQS 224
S+L ++V+ S
Sbjct: 140 TSRSVLATSRSVLATS 155
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -2
Query: 442 SVIELTREACEWDMLSLARTSSW*ASYSSLLG---YILDMSRSKLGSGRRERLDTNFFLQ 272
SV+ +R LA + S A+ S+L YIL SRS L +GR + + L
Sbjct: 143 SVLATSRSVLATSRSVLATSRSVLATSRSVLATSRYILATSRSVLATGRSSFATSRYILA 202
Query: 271 VGHSLLPDLKAVI 233
S+L ++V+
Sbjct: 203 TSRSVLATSRSVL 215
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 156 CPICLDML--KKTMTTKECLHRFCNDCI 233
C +C+D+ + +T C RFC+DC+
Sbjct: 1005 CIVCMDLKPENRMITMLNCQCRFCSDCV 1032
>SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39)
Length = 684
Score = 28.3 bits (60), Expect = 4.1
Identities = 26/94 (27%), Positives = 41/94 (43%)
Frame = -2
Query: 334 MSRSKLGSGRRERLDTNFFLQVGHSLLPDLKAVIIQSLQNLWRHSFVVIVFLSISKQIGH 155
+SRS +GS + ++ L HSL + ++Q + LW HS + + S+ +GH
Sbjct: 89 ISRSLMGS-----VAVSWDLSRDHSLSHGITRTLMQLVALLWDHSLIGSLIRSL---VGH 140
Query: 154 ISSL*RLRGETAISVASVITSCGVRCNS*RDSSH 53
++ E A SCG R R S H
Sbjct: 141 LA-------ECKFVSADCSNSCGARIQKRRMSEH 167
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +3
Query: 102 TDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDC---IITALRSGNKECPT 272
T+ ++ V ++ L CPI + +C H C D + G+ +CP
Sbjct: 913 TNGSDDGVEQTAIKVSLKCPITFRRISLPARGHDCKHIQCFDLESYLRLNCERGSWKCPV 972
Query: 273 CRKKLVSKRSLRPDPNFDLLISKIYPSRDE 362
C V + ++ P+ + + K P +DE
Sbjct: 973 CNSCEVEEVTIDPNSQWKPVTVKQEP-KDE 1001
>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Frame = +3
Query: 114 EIAVSPRSLHSELMCPICLDMLKKTMTTKE--------CLHRFCNDCIITALRSGNKE-- 263
++A S + + C +CLD++ E C+H FC +CI ++ + E
Sbjct: 160 KVAFSNVNGSENVTCAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKK 219
Query: 264 ----CPTCR 278
CP CR
Sbjct: 220 VVRACPICR 228
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 346 IPVGTNTRLTKNWFWLN*ACPIH 414
+P+GT + NWFW P H
Sbjct: 197 VPMGTTSETRVNWFWFTRTVPGH 219
>SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11)
Length = 632
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 346 IPVGTNTRLTKNWFWLN*ACPIH 414
+P+GT + NWFW P H
Sbjct: 323 VPMGTTSETRVNWFWFTRTVPGH 345
>SB_31078| Best HMM Match : PHD (HMM E-Value=7.4e-09)
Length = 241
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 266 TLFVARSQSGYNTVVAESMEAFFCSHCLFEHIQT 165
T +A + YN + ++S A+ C+ CLF + T
Sbjct: 35 TKCIAMTAQSYNRLGSDSQLAWLCNKCLFPNFST 68
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 201 ECLHRFCNDCII--TALRSGNKECPTCR 278
EC H +C+ CII + L+ CP C+
Sbjct: 409 ECGHTYCDSCIIKLSRLQKTQVACPECQ 436
>SB_28408| Best HMM Match : Ran_BP1 (HMM E-Value=4.6)
Length = 241
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 57 ELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLD-MLKKTMTTKECLHRFCNDCI 233
ELS+Y L R P+E++ A E+ + LD +L + + R +DCI
Sbjct: 173 ELSIYRLDRAPEELLPKAIEVTQDTLRNEVTHQDRVALDQLLPRVNESLAKATRALSDCI 232
Query: 234 IT 239
T
Sbjct: 233 NT 234
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK-----ECPTCRKKL 287
L L C C K CLH FC C+ R G K CPTC +L
Sbjct: 12 LIERLTCSACKGFYKNPKRLP-CLHAFCCHCLKKTQR-GTKLCERMRCPTCDYEL 64
>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
Length = 515
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 275
CPI L + K M++K C H + + I ++ + C
Sbjct: 445 CPITLKEMTKPMSSKNCKHSYEKEAIEHMIKKSRVKSVRC 484
>SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28)
Length = 222
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +3
Query: 252 GNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVN 431
G+KE C+KK ++ + F+L ++EA + L + S ASL+N
Sbjct: 99 GDKEIGKCKKKKKARTTFTGRQIFEL--------EKQFEAKKYLTATERS---DMASLLN 147
Query: 432 SITEGIKLQSQNRPQRSRKNHDESSNASN 518
+K+ QNR + +K E + +N
Sbjct: 148 VTETQVKIWFQNRRTKWKKQEKEINEDAN 176
>SB_47201| Best HMM Match : SAM_1 (HMM E-Value=7.1e-09)
Length = 765
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +3
Query: 48 KTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHR-FCN 224
K++++ L+ ++ + + + RS H C +C + L T C H C
Sbjct: 655 KSYDIKLF-VNEEEEPIYSPPETPPSQQRSTHGT--CIVCQN-LPVTRALLPCRHACVCG 710
Query: 225 DCIITALRSGNKECPTCRKKLVSKRSLRPDPNF 323
C + L S +CP CR+ + S + +PNF
Sbjct: 711 SCF-SRLES---KCPLCRQVIRSYFLTQEEPNF 739
>SB_45154| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 486
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 311 RSKRTFGH*FLSTSRTLFVARSQSGYN-TVVAESMEAFFCSHCLFEHIQTDWAHQLAVKT 135
RS + GH + R L ++ N TVV +S+ C FE + DW H L +
Sbjct: 17 RSIKFVGH---QSKRLLVPISAKDATNETVVQKSLLTDDVMDCSFECLSEDWCHSLNFRL 73
Query: 134 SWGDRYFRRVCD 99
+ + R VC+
Sbjct: 74 TL-TKSGRHVCE 84
>SB_34279| Best HMM Match : PAN (HMM E-Value=0.56)
Length = 269
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 311 RSKRTFGH*FLSTSRTLFVARSQSGYN-TVVAESMEAFFCSHCLFEHIQTDWAHQLAVKT 135
RS + GH + R L ++ N TVV +S+ C FE + DW H L +
Sbjct: 93 RSIKFVGH---QSKRLLVPISAKDATNETVVQKSLLTDDVMDCSFECLSEDWCHSLNFRL 149
Query: 134 SWGDRYFRRVCD 99
+ + R VC+
Sbjct: 150 TL-TKSGRHVCE 160
>SB_11546| Best HMM Match : DUF1407 (HMM E-Value=1.2)
Length = 367
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 183 KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLI 335
K T + +H C+ C + N++CP CR++ + LR + + +I
Sbjct: 217 KNPTPENTVHSCCSTCA----KRVNRKCPECREEFGATAELRENISLKRMI 263
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,329,248
Number of Sequences: 59808
Number of extensions: 336793
Number of successful extensions: 1107
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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