Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307B01f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 108 2e-24
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 102 1e-22
At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger) fa... 55 3e-08
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 53 1e-07
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 52 2e-07
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 52 2e-07
At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger) fa... 52 2e-07
At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger) fa... 52 2e-07
At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger) fa... 52 2e-07
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 51 4e-07
At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger) fa... 48 5e-06
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 47 9e-06
At5g22750.1 68418.m02657 SNF2 domain-containing protein / helica... 46 1e-05
At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger) fa... 46 2e-05
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 45 3e-05
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 45 3e-05
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 45 3e-05
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 45 3e-05
At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger) fa... 44 5e-05
At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger) fa... 44 6e-05
At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger) fa... 44 6e-05
At2g34000.1 68415.m04163 zinc finger protein-related contains we... 44 6e-05
At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger) fa... 44 8e-05
At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger) fa... 43 1e-04
At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger) fa... 42 2e-04
At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger) fa... 42 2e-04
At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger) fa... 42 2e-04
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 42 3e-04
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 42 3e-04
At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger) fa... 42 3e-04
At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger) fa... 41 4e-04
At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger) fa... 41 6e-04
At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger) fa... 40 0.001
At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger) fa... 39 0.002
At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger) fa... 39 0.002
At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger) fa... 39 0.002
At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger) fa... 39 0.002
At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger) fa... 38 0.004
At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger) fa... 38 0.004
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 38 0.005
At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger) fa... 38 0.005
At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger) fa... 38 0.005
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 38 0.005
At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger) fa... 38 0.005
At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 38 0.005
At2g15260.1 68415.m01740 zinc finger (C3HC4-type RING finger) fa... 37 0.007
At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger) fa... 37 0.007
At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger) fa... 37 0.009
At2g47700.1 68415.m05957 zinc finger (C3HC4-type RING finger) fa... 37 0.009
At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger) fa... 37 0.009
At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger) fa... 37 0.009
At1g15100.1 68414.m01803 zinc finger (C3HC4-type RING finger) fa... 37 0.009
At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger) fa... 36 0.017
At4g13490.1 68417.m02105 zinc finger (C3HC4-type RING finger) fa... 36 0.017
At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger) fa... 36 0.017
At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 36 0.017
At5g47430.1 68418.m05844 expressed protein 36 0.022
At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger) fa... 35 0.029
At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger) fa... 35 0.029
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 35 0.029
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 35 0.038
At3g05670.1 68416.m00631 PHD finger family protein contains Pfam... 35 0.038
At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger) fa... 35 0.038
At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger) fa... 34 0.050
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 34 0.050
At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger) fa... 34 0.050
At3g61790.1 68416.m06933 seven in absentia (SINA) family protein... 34 0.050
At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger) fa... 34 0.067
At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger) fa... 34 0.067
At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger) fa... 34 0.067
At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger) fa... 34 0.067
At1g71980.1 68414.m08320 protease-associated zinc finger (C3HC4-... 34 0.067
At5g16910.1 68418.m01982 cellulose synthase family protein simil... 33 0.088
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 33 0.088
At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger) fa... 33 0.088
At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger) fa... 33 0.088
At3g16600.1 68416.m02122 SNF2 domain-containing protein / helica... 33 0.088
At1g02730.1 68414.m00226 cellulose synthase family protein simil... 33 0.088
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (... 33 0.12
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 33 0.12
At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger) fa... 33 0.15
At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger) fa... 33 0.15
At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger) fa... 33 0.15
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 33 0.15
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 33 0.15
At1g04360.1 68414.m00426 zinc finger (C3HC4-type RING finger) fa... 33 0.15
At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger) fa... 32 0.20
At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger) fa... 32 0.20
At3g58040.1 68416.m06470 seven in absentia (SINA) family protein... 32 0.20
At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger) fa... 32 0.20
At2g41980.1 68415.m05193 seven in absentia (SINA) family protein... 32 0.20
At2g01150.1 68415.m00024 zinc finger (C3HC4-type RING finger) fa... 32 0.20
At5g64740.1 68418.m08141 cellulose synthase, catalytic subunit, ... 32 0.27
At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger) fa... 32 0.27
At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger) fa... 32 0.27
At4g34370.1 68417.m04883 IBR domain-containing protein similar t... 32 0.27
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 32 0.27
At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger) fa... 32 0.27
At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger) fa... 32 0.27
At2g25380.1 68415.m03039 zinc finger protein-related very low si... 32 0.27
At4g17410.1 68417.m02607 expressed protein 31 0.36
At3g62970.1 68416.m07074 zinc finger (C3HC4-type RING finger) fa... 31 0.36
At3g45470.1 68416.m04910 zinc finger protein-related contains lo... 31 0.36
At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger) fa... 31 0.36
At3g14250.1 68416.m01804 zinc finger protein-related contains we... 31 0.36
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 31 0.36
At1g22510.1 68414.m02812 zinc finger (C3HC4-type RING finger) fa... 31 0.36
At5g51450.1 68418.m06378 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At4g25230.2 68417.m03631 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At4g25230.1 68417.m03630 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE... 31 0.47
At1g72175.1 68414.m08345 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At1g60190.1 68414.m06780 armadillo/beta-catenin repeat family pr... 31 0.47
At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger) fa... 31 0.47
At4g27880.1 68417.m04002 seven in absentia (SINA) family protein... 31 0.62
At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger) fa... 31 0.62
At3g60220.1 68416.m06730 zinc finger (C3HC4-type RING finger) fa... 31 0.62
At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger) fa... 31 0.62
At1g57800.1 68414.m06558 zinc finger (C3HC4-type RING finger) fa... 31 0.62
At1g17145.1 68414.m02090 expressed protein 31 0.62
At5g09870.1 68418.m01141 cellulose synthase, catalytic subunit, ... 30 0.82
At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing... 30 0.82
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 30 0.82
At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger) fa... 30 1.1
At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At4g10940.1 68417.m01779 PHD finger family protein contains Pfam... 29 1.4
At4g09560.1 68417.m01571 protease-associated zinc finger (C3HC4-... 29 1.4
At4g00305.1 68417.m00038 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At3g20010.1 68416.m02531 SNF2 domain-containing protein / helica... 29 1.4
At2g45135.1 68415.m05617 expressed protein ; expression supporte... 29 1.4
At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At2g38185.3 68415.m04691 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At2g16090.1 68415.m01845 zinc finger protein-related contains si... 29 1.4
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 29 1.4
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 1.9
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 29 1.9
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 29 1.9
At2g25360.1 68415.m03035 zinc finger protein-related contains we... 29 1.9
At1g78280.1 68414.m09122 transcription factor jumonji (jmjC) dom... 29 1.9
At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger) fa... 29 1.9
At1g09060.2 68414.m01011 transcription factor jumonji (jmjC) dom... 29 1.9
At1g09060.1 68414.m01010 transcription factor jumonji (jmjC) dom... 29 1.9
At5g66160.2 68418.m08334 protease-associated zinc finger (C3HC4-... 29 2.5
At5g66160.1 68418.m08335 protease-associated zinc finger (C3HC4-... 29 2.5
At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger) fa... 29 2.5
At5g05170.1 68418.m00550 cellulose synthase, catalytic subunit (... 29 2.5
At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger) fa... 29 2.5
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 29 2.5
At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger) fa... 29 2.5
At5g03200.1 68418.m00268 zinc finger (C3HC4-type RING finger) fa... 28 3.3
At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18 pr... 28 3.3
At1g22670.1 68414.m02833 protease-associated zinc finger (C3HC4-... 28 3.3
At5g54020.1 68418.m06719 expressed protein 28 4.4
At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger) fa... 28 4.4
At1g79810.2 68414.m09319 Pex2/Pex12 N-terminal domain-containing... 28 4.4
At1g79810.1 68414.m09318 Pex2/Pex12 N-terminal domain-containing... 28 4.4
At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At5g01450.1 68418.m00058 expressed protein 27 5.8
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At1g78420.1 68414.m09138 expressed protein 27 5.8
At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At5g62560.1 68418.m07851 armadillo/beta-catenin repeat family pr... 27 7.7
At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein ... 27 7.7
At5g56890.1 68418.m07099 protein kinase family protein contains ... 27 7.7
At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit (... 27 7.7
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 27 7.7
At4g03000.2 68417.m00408 expressed protein contains similarity t... 27 7.7
At4g03000.1 68417.m00407 expressed protein contains similarity t... 27 7.7
At3g53690.1 68416.m05929 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At3g09660.1 68416.m01145 minichromosome maintenance family prote... 27 7.7
At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putat... 27 7.7
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 27 7.7
At1g35630.1 68414.m04427 protease-associated zinc finger (C3HC4-... 27 7.7
At1g35625.1 68414.m04426 protease-associated zinc finger (C3HC4-... 27 7.7
At1g05055.1 68414.m00506 basic transcription factor 2, 44kD subu... 27 7.7
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 108 bits (260), Expect = 2e-24
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Frame = +3
Query: 81 RTPQEVITDATE-IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGN 257
R+P + D +E + + + ++ CPICL ++KKT T ECLHRFC +CI ++R GN
Sbjct: 110 RSPSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN 169
Query: 258 KECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSI 437
ECP CRK S+RSLR DP FD LI+ ++ + D YE +EL + M+ ++ + SI
Sbjct: 170 NECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYE-EEELAFHEDEMARNK-QIQASI 227
Query: 438 TEGIKLQSQ 464
+ + QS+
Sbjct: 228 AQISQRQSE 236
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 102 bits (245), Expect = 1e-22
Identities = 41/93 (44%), Positives = 63/93 (67%)
Frame = +3
Query: 99 ITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCR 278
++++ + V + ++ C ICL +++KT T ECLHRFC +CI ++R GN ECPTCR
Sbjct: 84 LSESEYMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCR 143
Query: 279 KKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQ 377
K S+RSLR DPNFD LI+ ++ + D++E +
Sbjct: 144 KHCASRRSLRDDPNFDALIAALFKNIDKFEEEE 176
>At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger)
family protein
Length = 421
Score = 54.8 bits (126), Expect = 3e-08
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Frame = +3
Query: 117 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-CPTCRKKLVS 293
I V ++ + L C IC ++L+ T ECLH FC CI + E CP C L S
Sbjct: 3 IKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGS 62
Query: 294 K--RSLRPDPNFDLLISKIYP-SRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQ 464
LRPD N L +KI+ R + +A + L S +SLV S T + Q+
Sbjct: 63 TPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIVSLPGKRKERSISSLVVS-TPMVSAQAG 121
Query: 465 NRPQRSR 485
+R++
Sbjct: 122 TTRRRTK 128
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 52.8 bits (121), Expect = 1e-07
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-CPTCRKKL--VSKRSLRPDPN 320
+ CP+C +L+ T ECLH FC CI + E CP C L LRPD
Sbjct: 18 MTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPLEKLRPDHI 77
Query: 321 FDLLISKIYPSRDEYEAHQELVLA-KLSMSHSQASLVNSITEGIKLQSQ 464
L +K++P + + E E+V + L + S+ + + ++ +Q
Sbjct: 78 LQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPRVSAQ 126
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = +3
Query: 120 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
AV+P + CPICL + ++TK C H FC CI AL S +CPTCRKK+ K
Sbjct: 115 AVAPPVEEPKFSCPICLCPFTQEVSTK-CGHIFCKKCIKNAL-SLQAKCPTCRKKITVKD 172
Query: 300 SLR 308
+R
Sbjct: 173 LIR 175
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
L +L+CPIC+ ++K T C H FC CIIT LR+ +CP C + L + + L P+
Sbjct: 46 LDKDLLCPICMQIIKDAFLT-ACGHSFCYMCIITHLRN-KSDCPCCSQHLTNNQ-LYPNF 102
Query: 318 NFDLLISK 341
D L+ K
Sbjct: 103 LLDKLLKK 110
>At5g48655.3 68418.m06019 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +3
Query: 120 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
A +P + CPIC+ + M+TK C H FC CI A+ K CPTCRKK+ +K
Sbjct: 136 APAPPPEEPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGK-CPTCRKKVTAKE 193
Query: 300 SLR 308
+R
Sbjct: 194 LIR 196
>At5g48655.2 68418.m06018 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +3
Query: 120 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
A +P + CPIC+ + M+TK C H FC CI A+ K CPTCRKK+ +K
Sbjct: 136 APAPPPEEPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGK-CPTCRKKVTAKE 193
Query: 300 SLR 308
+R
Sbjct: 194 LIR 196
>At5g48655.1 68418.m06017 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 203
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +3
Query: 120 AVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
A +P + CPIC+ + M+TK C H FC CI A+ K CPTCRKK+ +K
Sbjct: 136 APAPPPEEPKFTCPICMCPFTEEMSTK-CGHIFCKGCIKMAISRQGK-CPTCRKKVTAKE 193
Query: 300 SLR 308
+R
Sbjct: 194 LIR 196
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 51.2 bits (117), Expect = 4e-07
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
EL CPICL + ++ C H FCN CI+ +++ + CP C K +R +R P+ D
Sbjct: 348 ELKCPICLSLYNSAVSLS-CNHVFCNACIVKSMKM-DATCPVC-KIPYHRREIRGAPHMD 404
Query: 327 LLISKIYPSRDEYEAHQELVLA-KLSMSHSQASLVNSITEGIKLQSQNRPQRSRKNHDES 503
L+S IY + ++ + V S S + + ++ E K +NR Q SRK
Sbjct: 405 SLVS-IYKNMEDASGIKLFVSQNNPSPSDKEKQVRDASVE--KASDKNR-QGSRKGRASK 460
Query: 504 SN 509
N
Sbjct: 461 RN 462
>At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger)
family protein very low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 692
Score = 47.6 bits (108), Expect = 5e-06
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 117 IAVSPRSLHSELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCRKK 284
+ +S S S C ICL+ +K+ + T EC H F CI + ++ GN+ CP CR K
Sbjct: 59 LKLSRNSSKSSKTCSICLNKMKEGGGHALFTAECSHSFHFHCIASNVKHGNQVCPVCRAK 118
Query: 285 LVSKRSLRPDPNFDL 329
K P+FDL
Sbjct: 119 W--KEIPMQHPSFDL 131
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +3
Query: 33 EPSQNKTWELSLYELHRTPQEVITDATEIAV-----SPRSLHSELMCPICLDMLKKTMTT 197
E + K E L EL++ +E+ +++ E A+ ++ + L C +C D K+ +
Sbjct: 285 ERREKKKLEEELMELNKELEELGSESVEAAIVRLQEEVKNCKNILKCGVCFDRPKEVVIV 344
Query: 198 KECLHRFCNDCIITALRSGNKECPTC 275
K C H FC CI +L +++CP C
Sbjct: 345 K-CYHLFCQQCIQRSLEIRHRKCPGC 369
>At5g22750.1 68418.m02657 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1029
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-CPTCRKKLVSKRSLRPDP 317
CPICL+ L+ + T C HR C +C++ + R+ CP CR VSK+ L P
Sbjct: 794 CPICLEALEDAVLTP-CAHRLCRECLLASWRNSTSGLCPVCR-NTVSKQELITAP 846
>At3g23060.1 68416.m02907 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 480
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKECLHRFCNDCIITA-LRSGNKECPTCRKKL--VSKRSLRPDPN 320
L CPIC + K T ECLH FC CI + CP C L LR D
Sbjct: 14 LACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLRSDCT 73
Query: 321 FDLLISKIY 347
+ L KIY
Sbjct: 74 WQDLKLKIY 82
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDLL 332
C +CL +L + TT C H FC C+ ++ GNK CP CR + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 333 ISKIYPSRDEY 365
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDLL 332
C +CL +L + TT C H FC C+ ++ GNK CP CR + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 333 ISKIYPSRDEY 365
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDLL 332
C +CL +L + TT C H FC C+ ++ GNK CP CR + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 333 ISKIYPSRDEY 365
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL-VSKRSLRPDPNFDLL 332
C +CL +L + TT C H FC C+ ++ GNK CP CR + ++ R+ + +
Sbjct: 196 CTVCLKLLYEPATTP-CGHTFCRSCLFQSMDRGNK-CPLCRTVIFMTPRTCAVSVTLNNI 253
Query: 333 ISKIYPSRDEY 365
I K +P +EY
Sbjct: 254 IEKNFP--EEY 262
>At3g27330.1 68416.m03418 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles: PF00097 zinc
finger, C3HC4 type (RING finger), PF01697 Domain of
unknown function
Length = 913
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKR 299
L EL C ICL++ + TT C H FC C+ +A ++CP CR+ + + R
Sbjct: 718 LRDELSCAICLEICFEPSTTT-CGHSFCKKCLRSAADKCGRKCPKCRQLIGNGR 770
>At5g60710.1 68418.m07618 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 704
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Frame = +3
Query: 129 PRSLH---SELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCRKK 284
PRS+ S+ C ICL +K + T EC H F CI T ++ GN+ CP CR K
Sbjct: 60 PRSMSKSSSKKTCAICLTAMKAGQGHAIFTAECSHSFHFQCITTNVKHGNQICPVCRAK 118
>At3g54780.1 68416.m06061 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 675
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 123 VSPRSLHSELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCRKK 284
+S S S C ICL+ +K+ + T EC H F CI + ++ GN+ CP CR K
Sbjct: 63 LSRSSSKSSKTCSICLNKMKEGCGHAIFTAECSHMFHFHCIASNVKHGNQVCPVCRAK 120
>At2g34000.1 68415.m04163 zinc finger protein-related contains weak
hit to Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 151
Score = 44.0 bits (99), Expect = 6e-05
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 129 PRSLHSELMCPICLDMLKKTMTTK---ECLHRFCNDCIITALRSGNKECPTCRK 281
P S + E+ CP+CL ++ K + K C+H F +CI L S + CP CR+
Sbjct: 82 PESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEECIGKWLES-HATCPVCRR 134
>At3g54780.2 68416.m06062 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 676
Score = 43.6 bits (98), Expect = 8e-05
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCRKK 284
S S+ C ICL+ +K+ + T EC H F CI + ++ GN+ CP CR K
Sbjct: 68 SKSSKQTCSICLNKMKEGCGHAIFTAECSHMFHFHCIASNVKHGNQVCPVCRAK 121
>At2g44950.1 68415.m05596 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 878
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTC 275
L C C D K+ + TK C H FCN C+ + K+CPTC
Sbjct: 824 LKCKACNDRPKEVVITK-CYHLFCNPCVQKLTGTRQKKCPTC 864
>At5g59550.1 68418.m07462 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 407
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 90 QEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKE 263
+ I + +S + SE C +C ++ + +E C H F +DCI+ L N
Sbjct: 177 KSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNS- 235
Query: 264 CPTCRKKLVSKRSLRPDPN 320
CP CR +L S+ + R + N
Sbjct: 236 CPVCRFELPSEPNRRSNNN 254
>At3g56580.2 68416.m06292 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +3
Query: 87 PQEVITDATEIAVSPRSLHS-ELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGN 257
P+ I I ++ + L S + CP+C D + K+ C H + +DCI+ L N
Sbjct: 162 PKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN 221
Query: 258 KECPTCRKKLVSKRS 302
CP CRK+L S+ S
Sbjct: 222 S-CPVCRKELPSRGS 235
>At3g56580.1 68416.m06291 zinc finger (C3HC4-type RING finger)
family protein contains INTERPRO domain, IPR001841, RING
finger
Length = 320
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +3
Query: 87 PQEVITDATEIAVSPRSLHS-ELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGN 257
P+ I I ++ + L S + CP+C D + K+ C H + +DCI+ L N
Sbjct: 162 PKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN 221
Query: 258 KECPTCRKKLVSKRS 302
CP CRK+L S+ S
Sbjct: 222 S-CPVCRKELPSRGS 235
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGN-KECPTCR 278
CPICL+ + T C HR C +C++T+ RS + CP CR
Sbjct: 1040 CPICLESADDPVLTP-CAHRMCRECLLTSWRSPSCGLCPICR 1080
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 41.5 bits (93), Expect = 3e-04
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 84 TPQEVITDATEIA---VSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG 254
T E +TD E+ V+ + CPIC+ + T+ C H FC CI+ L+
Sbjct: 589 TSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITR-CAHIFCRACILQTLQRS 647
Query: 255 NKECPTCRKKL 287
CP CR L
Sbjct: 648 KPLCPLCRGSL 658
>At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 102 TDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE-----C 266
T +I++ P H++ C ICL++ +T CLH FCN C +R ++ C
Sbjct: 124 TQLLQISIDPE--HAK--CSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLC 179
Query: 267 PTCR 278
P CR
Sbjct: 180 PQCR 183
>At1g08050.1 68414.m00879 zinc finger (C3HC4-type RING finger)
family protein low similarity to SP|P79263
Inter-alpha-trypsin inhibitor heavy chain H4 precursor
{Sus scrofa}; contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 641
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +3
Query: 156 CPICLDMLKK----TMTTKECLHRFCNDCIITALRSGNKECPTCR 278
C ICL ++K + T EC H F DCI + ++ GN+ CP CR
Sbjct: 69 CAICLYEIRKEDGKAIFTAECSHSFHFDCITSNVKHGNRICPLCR 113
>At5g54990.1 68418.m06848 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 226
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCRKKLVSK 296
L CPICL L ++ + C H F DCI+T L+ N CP CR K K
Sbjct: 172 LDCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKK-NPSCPICRTKAHGK 221
>At3g58030.3 68416.m06469 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTCRKKLVSK 296
C ICLD+ K+ + T C H +C C+ L+ S KECP C+ ++ SK
Sbjct: 139 CNICLDLSKEPVLTC-CGHLYCWPCLYQWLQISDAKECPVCKGEVTSK 185
>At3g58030.2 68416.m06468 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTCRKKLVSK 296
C ICLD+ K+ + T C H +C C+ L+ S KECP C+ ++ SK
Sbjct: 139 CNICLDLSKEPVLTC-CGHLYCWPCLYQWLQISDAKECPVCKGEVTSK 185
>At3g58030.1 68416.m06467 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 436
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALR-SGNKECPTCRKKLVSK 296
C ICLD+ K+ + T C H +C C+ L+ S KECP C+ ++ SK
Sbjct: 139 CNICLDLSKEPVLTC-CGHLYCWPCLYQWLQISDAKECPVCKGEVTSK 185
>At1g04020.2 68414.m00389 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 713
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRP 311
+ L EL CP+CL +L + + C H FC+ C+ + + CP C+ K + R
Sbjct: 17 QKLELELKCPLCLKLLNRPVLL-PCDHVFCDSCVHKSSQV-ESGCPVCKSK--HPKKARR 72
Query: 312 DPNFDLLISKIYPS 353
D F + IY S
Sbjct: 73 DLRFMESVISIYKS 86
>At1g04020.1 68414.m00388 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domain, PF00533: BRCA1 C Terminus (BRCT) domain
Length = 714
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRP 311
+ L EL CP+CL +L + + C H FC+ C+ + + CP C+ K + R
Sbjct: 17 QKLELELKCPLCLKLLNRPVLL-PCDHVFCDSCVHKSSQV-ESGCPVCKSK--HPKKARR 72
Query: 312 DPNFDLLISKIYPS 353
D F + IY S
Sbjct: 73 DLRFMESVISIYKS 86
>At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger C3HC4 type (RING finger), PF02182: YDG/SRA
domain
Length = 465
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
+L C +C + + +T C H FC C + GN+ C TCR + K + P N
Sbjct: 106 DLNCSLCNQLPDRPVTIL-CGHNFCLKCFDKWIDQGNQICATCRSTIPDKMAANPRVNSS 164
Query: 327 LL 332
L+
Sbjct: 165 LV 166
>At3g13430.1 68416.m01688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 315
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +3
Query: 105 DATEIAVSPRSLHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCR 278
+A E + S L C +CLD + M KE C H+F +DC++ L + CP CR
Sbjct: 208 EAVEALAMVKIEDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLEL-HSSCPVCR 266
>At4g30400.1 68417.m04318 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 472
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 156 CPICL---DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
C +CL + K +C H F DCI T L S + CP CR L+S S DP
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLS-HSTCPLCRSSLLSDLSSHQDPRSS 192
Query: 327 LLI 335
L+
Sbjct: 193 FLL 195
>At2g42360.1 68415.m05242 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 236
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
C +CL +LK+ +E C H F DC+ T L + + CP CR ++ + L P+P
Sbjct: 108 CAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCST-CPVCRTEVEPRPRLEPEP 163
>At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 642
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPD 314
+L LMC C+ + ++ +T K C H C C + G + C CR + K + P
Sbjct: 139 ALGDNLMCSFCMQLPERPVT-KPCGHNACLKCFEKWMGQGKRTCGKCRSIIPEKMAKNPR 197
Query: 315 PNFDLL 332
N L+
Sbjct: 198 INSSLV 203
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 18 KMSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTT 197
K P+ K+ + E + ++ I A + R L E C IC +L +TT
Sbjct: 470 KWMKPPPASKKSVNVLAPEERKNLRKAIKAAHSNTMRARLL-KEFKCQICQQVLTLPVTT 528
Query: 198 KECLHRFCNDCI 233
C H FC C+
Sbjct: 529 P-CAHNFCKACL 539
>At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 645
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPD 314
+L LMC C+ + ++ +T K C H C C + G + C CR + K + P
Sbjct: 139 ALGDNLMCSFCMQLPERPVT-KPCGHNACLKCFEKWMGQGKRTCGKCRSIIPEKMAKNPR 197
Query: 315 PNFDLL 332
N L+
Sbjct: 198 INSSLV 203
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +3
Query: 18 KMSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTT 197
K P+ K+ + E + ++ I A + R L E C IC +L +TT
Sbjct: 473 KWMKPPPASKKSVNVLAPEERKNLRKAIKAAHSNTMRARLL-KEFKCQICQQVLTLPVTT 531
Query: 198 KECLHRFCNDCI 233
C H FC C+
Sbjct: 532 P-CAHNFCKACL 542
>At5g05910.1 68418.m00653 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 151
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = +3
Query: 147 ELMCPICLDMLKK--------TMTTKECLHRFCNDCIITALRSGNKECPTCR 278
EL CPICL+ LKK + +C H F +CI + LR +++CP CR
Sbjct: 89 ELCCPICLEDLKKVDNDDDKVVVCLSKCNHSFHMNCIFSWLRE-SQDCPICR 139
>At1g60360.1 68414.m06796 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 90 QEVITDATEIAVSPRSLHSEL-MCPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNK 260
+ I + ++P+ L +++ C +C++ ++ T C H + DCI+ LR N
Sbjct: 201 EPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRL-NN 259
Query: 261 ECPTCRKKL 287
CP CR+ L
Sbjct: 260 SCPICRRDL 268
>At3g14320.1 68416.m01811 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 204
Score = 37.9 bits (84), Expect = 0.004
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 150 LMCPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPN 320
L C +CL L K C H F +CI + L+S N CP CRK++ K+S R P
Sbjct: 86 LECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQS-NSTCPICRKRVCLKQS-RTRPE 143
Query: 321 FDLLISKIYPSRDEYEAHQE 380
+ D+ H E
Sbjct: 144 LGGRDKSFNQNHDQTSEHHE 163
>At3g10815.1 68416.m01302 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 199
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 ITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPT 272
I +I + + L + CP+C D + ++ C H + ++CI+ L N CP
Sbjct: 102 INSLQKIKIRQKHLGLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNT-CPV 160
Query: 273 CRKKLVSKRS 302
CRK+L R+
Sbjct: 161 CRKELPQDRN 170
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCRKKLVS 293
L C +CLD +K KE C H+F CI+ L + CP CR +L S
Sbjct: 257 LQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLEL-HSSCPVCRFELPS 305
>At4g26400.2 68417.m03800 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRP 311
+ L C ICLD K KE C H+F CI+ L + CP CR +L +
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL-HSSCPVCRYELPPDDETKV 293
Query: 312 DP 317
+P
Sbjct: 294 NP 295
>At4g26400.1 68417.m03799 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 356
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRP 311
+ L C ICLD K KE C H+F CI+ L + CP CR +L +
Sbjct: 235 ISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL-HSSCPVCRYELPPDDETKV 293
Query: 312 DP 317
+P
Sbjct: 294 NP 295
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 150 LMCPICL--DMLKKTMTTKECLHRFCNDCII 236
+ C +C+ D+ MT EC HRFCNDC I
Sbjct: 119 MKCDVCMEDDLPSNVMTRMECGHRFCNDCWI 149
>At1g18760.1 68414.m02339 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 224
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 81 RTPQEVITDATEIAVSPRSLHSELMCPICLDMLKK--TMTTKECLHRFCNDCIITALRSG 254
R +++ ++ + ++ S C ICL+ + T C H F ++C++T +
Sbjct: 150 RPANKLVVNSLARKIYKKTTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFET- 208
Query: 255 NKECPTCRKKL 287
N +CP CR KL
Sbjct: 209 NHDCPLCRFKL 219
>At1g05120.1 68414.m00514 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P79051 DNA
repair protein rhp16 (RAD16 homolog)
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 833
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRS-GNKECPTCRKKLVSKRSLRPD 314
SE C +C D + + T C H FC C+I S G CPTC K L + + D
Sbjct: 575 SEQECGLCHDPAEDYVVTS-CAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKAD 631
>At2g15260.1 68415.m01740 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 362
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Frame = +3
Query: 153 MCPICLDML------KKTMTTKECLHRFCNDCIITALRS-GNKECPTCR 278
+C IC L ++T+ T +C+H+F DCI +A + G ECP CR
Sbjct: 122 LCSICRGALVNENDVQRTLVTLKCVHKFHLDCIGSAYNAKGFMECPNCR 170
>At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIIT--ALRSGNKECPTCRKKLVSKR 299
S C ICLD+ + + T C H FC C+ L S +K+CP C+ + R
Sbjct: 19 SNFECNICLDLAQDPIVTL-CGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEEDR 71
>At4g18110.1 68417.m02693 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 213
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKE-----CLHRFCNDCIITALRSGNKECPTCRKKLVSKRS 302
C ICL+ L + + + C H F DCI+ LR + CPTCR + ++R+
Sbjct: 155 CIICLEELASSGSERRIMKLLCSHSFHKDCILPWLRC-KRSCPTCRDDIHNRRA 207
>At2g47700.1 68415.m05957 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type(RING finger)
Length = 358
Score = 36.7 bits (81), Expect = 0.009
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Frame = +3
Query: 147 ELMCPICLDML----KKTMTTKECLHRFCNDCIITALR-SGNKECPTCR-----KKLVSK 296
E+ C ICL+ + ++ +C H+F DCI +A G +CP CR + L +
Sbjct: 35 EVSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGAMQCPNCRNVEKGQWLYAN 94
Query: 297 RSLRPDPNFDL 329
S RP P F +
Sbjct: 95 GSTRPFPEFSM 105
>At2g15580.1 68415.m01784 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 196
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 132 RSLHSELMCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGNKECPTCR 278
R + + C ICLD KK T+ C H+F + C++ L + N CP CR
Sbjct: 142 RRVREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDT-NVYCPYCR 191
>At1g55530.1 68414.m06353 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 351
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 120 AVSPRSLHSELMCPICLDMLKKTMTTK--ECLHRFCNDCIITALRSGNKECPTCRKKL 287
A++ + L C +CLD + K C H+F +DC++ L + CP CR +L
Sbjct: 211 ALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLEL-HSSCPVCRYQL 267
>At1g15100.1 68414.m01803 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 155
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 156 CPICLDMLKKTMTTK--ECLHRFCNDCIITALRSGNKECPTCRKKLVS 293
C +CL LK+ + EC H F C+ L N CP CR LVS
Sbjct: 86 CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVS 133
>At5g01980.1 68418.m00117 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 493
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 99 ITDATEIAVSPRSLHSELMCPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPT 272
+ + + ++ + L+C IC ++ L+ T CLH + CI+ L S CP
Sbjct: 331 VRNLPRVIIAEEHVMKGLVCAICKELFSLRNETTQLPCLHLYHAHCIVPWL-SARNSCPL 389
Query: 273 CRKKL 287
CR +L
Sbjct: 390 CRYEL 394
>At4g13490.1 68417.m02105 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 35.9 bits (79), Expect = 0.017
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = +3
Query: 156 CPICLDML-----KKTMTTKECLHRFCNDCIITALRSGNK-ECPTCRK 281
C +CL+ L ++T+ C H+F DC+ ++ NK ECP CR+
Sbjct: 22 CAVCLEPLANDADERTVVKLRCSHKFHLDCVGSSFNIKNKMECPCCRQ 69
>At2g44330.1 68415.m05514 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 180
Score = 35.9 bits (79), Expect = 0.017
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 126 SPRSLHSELMCPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
S S S L C IC + ++ ++ C H + NDCII L S N CP CR +L
Sbjct: 86 SASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHN-SCPLCRVEL 140
>At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 90 QEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKE--CLHRFCNDCIITALRSGNKE 263
Q I + ++ L E +C IC + + KE CLH + + CI++ L N
Sbjct: 116 QSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHN-T 174
Query: 264 CPTCR 278
CP CR
Sbjct: 175 CPICR 179
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 35.5 bits (78), Expect = 0.022
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHR-FCNDCIITALRSGNKECPTCRKKLVSKRSLRPD 314
L EL CP+C +++K T +C ++ FC+ CI + S K C + V L P+
Sbjct: 289 LPPELKCPLCKEVMKDAALTSKCCYKSFCDKCIRDHIIS--KSMCVCGRSDVLADDLLPN 346
Query: 315 PNFDLLISKI 344
I++I
Sbjct: 347 KTLRDTINRI 356
>At5g43200.1 68418.m05278 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 207
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCRK 281
C ICL+ L + E C H F C+ L GN CP CRK
Sbjct: 156 CAICLEELSTSDDYCELPNCTHCFHEPCLTQWLIRGNNSCPLCRK 200
>At3g58720.1 68416.m06545 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 238
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +3
Query: 36 PSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML--KKTMTTKECL 209
P LSLY ++ P + T+ + + C +CL+ K+T+ C
Sbjct: 107 PKSTLLRSLSLYYRNKNPGSESSRNTQ---NLSGEEDDKRCSVCLEDFEPKETVMLTPCK 163
Query: 210 HRFCNDCIITALRSGNKECPTCR 278
H F +CI+ L++ +CP CR
Sbjct: 164 HMFHEECIVPWLKT-KGQCPVCR 185
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 35.1 bits (77), Expect = 0.029
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECP 269
+C IC ++ K C H FCN CI L N +CP
Sbjct: 918 ICGIC-NVAPKDAVVSLCGHVFCNQCICECLTRDNNQCP 955
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 34.7 bits (76), Expect = 0.038
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 72 ELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCII 236
E+ + E+ + + + P + EL CPICL + + + C H FC C++
Sbjct: 1535 EVQKMVNELAREKSALGEKPDEI--ELECPICLSEVDDGYSLEGCSHLFCKACLL 1587
>At3g05670.1 68416.m00631 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 883
Score = 34.7 bits (76), Expect = 0.038
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +3
Query: 153 MCPICL---DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL-VSKRSLRPDPN 320
+C ICL DM + T C H FC CI+ + ++ CP C+++ + R P
Sbjct: 412 VCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESR-CPLCKQRFRTISKPARSTPG 470
Query: 321 FDLLISKI-YPSRDE-YEAHQE 380
DL I P RD+ Y+ +E
Sbjct: 471 VDLREVVIPVPERDQVYQPTEE 492
>At1g04790.1 68414.m00475 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 634
Score = 34.7 bits (76), Expect = 0.038
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
C ICL+ K T+ CLH+F DCI L +K CP C+ +
Sbjct: 589 CVICLETPKIGDTIRHLPCLHKFHKDCIDPWL-GRSKSCPVCKSSV 633
>At5g46650.1 68418.m05748 zinc finger (C3HC4-type RING finger)
family protein contains similarity to RING-H2 zinc
finger protein ATL6 [Arabidopsis thaliana] GI:4928403;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 289
Score = 34.3 bits (75), Expect = 0.050
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Frame = +3
Query: 150 LMCPICL------DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
L C ICL +L + +TT C H F +CI L S NK CP CR+ L
Sbjct: 112 LECAICLLEFEEEHILLRLLTT--CYHVFHQECIDQWLES-NKTCPVCRRNL 160
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +3
Query: 156 CPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPD 314
C +CL + K C H F DCI L++ N CP CR ++ S PD
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQN-NANCPLCRTRVSCDTSFPPD 192
>At5g12310.1 68418.m01447 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 254
Score = 34.3 bits (75), Expect = 0.050
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 156 CPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPTC 275
C ICLD L++T K C H +C CI+ + KE PTC
Sbjct: 43 CAICLDTIPLQETAMVKGCEHAYCVTCILR--WASYKEKPTC 82
>At3g61790.1 68416.m06933 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 326
Score = 34.3 bits (75), Expect = 0.050
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +3
Query: 108 ATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
A+ + + S+H L CP+C + + + H C+ C R N+ CPTCR++L
Sbjct: 47 ASGLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTC---KARVHNR-CPTCRQEL 102
Query: 288 VSKRSL 305
R L
Sbjct: 103 GDIRCL 108
>At5g47610.1 68418.m05876 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 33.9 bits (74), Expect = 0.067
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 144 SELMCPICLDMLKK---TMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPD 314
+E C ICL ++ ++C H F CI L S CPTCR + S+ S P
Sbjct: 103 AEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWL-STRSSCPTCRTSIFSQHSETPS 161
Query: 315 PNFD 326
+ +
Sbjct: 162 SHIN 165
>At5g40250.1 68418.m04883 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 376
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +3
Query: 156 CPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
C +CL K C H F +CI T L+S N CP CR L S +P FD
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQS-NSTCPLCRGTLFSPGFSMENPMFD 201
>At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA2b [Arabidopsis thaliana] GI:3790571; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 211
Score = 33.9 bits (74), Expect = 0.067
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCRK 281
C ICL+ L ++ E C H F C+ L N CP CRK
Sbjct: 160 CAICLENLLRSEDYCEMPTCSHYFHEPCLTEWLTRDNNSCPLCRK 204
>At2g29840.1 68415.m03624 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 310
Score = 33.9 bits (74), Expect = 0.067
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +3
Query: 153 MCPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
MC ICL+ +++ C H F ++C + + N +CP CR KL
Sbjct: 260 MCSICLEEFDDGRSIVALPCGHEFDDECALKWFET-NHDCPLCRFKL 305
>At1g71980.1 68414.m08320 protease-associated zinc finger
(C3HC4-type RING finger) family protein identical to
ReMembR-H2 protein JR702 [Arabidopsis thaliana]
gi|6942149|gb|AAF32326; contains Pfam domain, PF02225:
protease-associated (PA) domain and Pfam domain,
PF00097: Zinc finger, C3HC4 type (RING finger);
identical to cDNA ReMembR-H2 protein JR702 mRNA, partial
cds GI:6942148
Length = 448
Score = 33.9 bits (74), Expect = 0.067
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
Frame = +3
Query: 156 CPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDL 329
C ICL+ + + C H+F C+ + L S CP C++ + P
Sbjct: 232 CAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEPPASESTP 291
Query: 330 LISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSIT 440
L+S S H + + L + S SL SI+
Sbjct: 292 LLSSAASSFTSSSLHSSVRSSALLIGPSLGSLPTSIS 328
>At5g16910.1 68418.m01982 cellulose synthase family protein similar
to gi:2827143 cellulose synthase catalytic subunit,
Arabidopsis thaliana, gi:9622886 cellulose synthase-7
from Zea mays
Length = 1145
Score = 33.5 bits (73), Expect = 0.088
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 201 ECLHRFCNDCIITALRSGNKECPTCRK 281
EC + C DC I A+++G CP C++
Sbjct: 150 ECDFKICRDCFIDAVKTGGGICPGCKE 176
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 33.5 bits (73), Expect = 0.088
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 72 ELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCII 236
E+ + E+ + + + P + E+ CPICL + + + C H FC C++
Sbjct: 1538 EVQKMVNELAREKSALGEKPDEI--EVECPICLSEVDDGYSLEGCSHLFCKACLL 1590
>At4g17245.1 68417.m02593 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 166
Score = 33.5 bits (73), Expect = 0.088
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTK---ECLHRFCNDCIITALRSGNKECPTCRKKLVS 293
+E C ICL + T + C H F CI L S + CPTCR + S
Sbjct: 98 NEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFS 150
>At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 71
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 156 CPICLDML-----KKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
C ICL+ L + +T C H F N C++ L+ N CP CR +L
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKN-TCPLCRTEL 69
>At3g16600.1 68416.m02122 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P31244 DNA
repair protein RAD16 {Saccharomyces cerevisiae};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 638
Score = 33.5 bits (73), Expect = 0.088
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECP--TCRKKL 287
S C +C D K + T C H FC +C+ + N CP C +L
Sbjct: 391 SSTTCSVCSDPPKDPVVTL-CGHVFCYECVSVNINGDNNTCPALNCHSQL 439
>At1g02730.1 68414.m00226 cellulose synthase family protein similar
to cellulose synthase catalytic subunit [gi:13925881]
from Nicotiana alata, cellulose synthase-4 [gi:9622880]
from Zea mays
Length = 1181
Score = 33.5 bits (73), Expect = 0.088
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 201 ECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
EC R C DC + SG CP C++ R + DP
Sbjct: 177 ECGFRICRDCYFDCITSGGGNCPGCKEPY---RDINDDP 212
>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
(Ath-A) identical to gi:2827141
Length = 1084
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 78 HRTPQEVITDATEIAVSPRSLH--SELMCPICLDMLKKTMTTK------ECLHRFCNDCI 233
H + V+ +A E A RS+ S C IC D ++ T++++ EC C C
Sbjct: 12 HNRNEFVLINADESA-RIRSVQELSGQTCQICGDEIELTVSSELFVACNECAFPVCRPCY 70
Query: 234 ITALRSGNKECPTCRKK 284
R GN+ CP C+ +
Sbjct: 71 EYERREGNQACPQCKTR 87
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Frame = +3
Query: 87 PQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI---ITALRSGN 257
PQ+ E + +++ C IC + C HRFC CI L S
Sbjct: 277 PQDDDESTREETEATEKAPAQVSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSER 336
Query: 258 KE--CPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVN 431
K+ CP C+ ++ + + D KIY + +L L Q +N
Sbjct: 337 KKTTCPLCKSNFITITKIEDADSSD---QKIYSQTVPDLSSTNNILVVLPEEEEQRQTLN 393
Query: 432 SIT 440
+T
Sbjct: 394 PLT 396
>At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 508
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 12/58 (20%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCII----TALRS--------GNKECPTCRKKLVS 293
C +CL+ K T+ C H FC +C + T++ S G+ CP CR +VS
Sbjct: 321 CAVCLER-KCTVAADGCAHEFCTNCALYLSTTSITSSKTSNVTPGSVPCPLCRNGIVS 377
>At4g38140.1 68417.m05385 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 145
Score = 32.7 bits (71), Expect = 0.15
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 ELMCPICL-DMLKKTMTTK--ECLHRFCNDCIITALRSGNKECPTCR 278
E+ CPICL + + T C H F +CI L G+ CP CR
Sbjct: 59 EICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCR 105
>At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 206
Score = 32.7 bits (71), Expect = 0.15
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 156 CPICLDML-----KKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
C ICL+ L + +T C H F N C++ L+ N CP CR ++
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKN-TCPLCRTEI 204
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 32.7 bits (71), Expect = 0.15
Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPT--CRKKLVSKRSLRP 311
L S +C +C D + + T C H FC C+ + CP CR++L
Sbjct: 673 LESSPICCVCHDPPEDPVVTL-CGHIFCYQCVSDYITGDEDTCPAPRCREQLAHDVVFSK 731
Query: 312 DPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQ 458
+ + S E +H + V S S+ V I + + Q
Sbjct: 732 STLRSCVADDLGCSSSEDNSHDKSVFQNGEFSSSKIKAVLDILQSLSNQ 780
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 32.7 bits (71), Expect = 0.15
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Frame = +3
Query: 156 CPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
C +CL + K C H F DCI L S + CP CR L+ RS + D
Sbjct: 100 CSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTS-HTTCPLCRLALIPSRSRQSQD--D 156
Query: 327 LLISKIYPSRD-EYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRP 473
+ S + P + + E V ++ + ++ VN G+ Q +++P
Sbjct: 157 PVPSLVSPDEEVSSQPESEPVNHRVVSTQPESEPVNH--SGVSSQPESQP 204
>At1g04360.1 68414.m00426 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 381
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +3
Query: 156 CPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPD 314
C +CL+ + K C H F DCI L+ GN CP CR + + S D
Sbjct: 134 CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQ-GNANCPLCRTSVSCEASFTLD 188
>At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCR 278
+C IC + + + + C H FC DC ++ + CP CR
Sbjct: 364 LCAICQEKMHTPILLR-CKHMFCEDC-VSEWFERERTCPLCR 403
>At4g23450.1 68417.m03380 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 153
Score = 32.3 bits (70), Expect = 0.20
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 99 ITDATEIAVSPRSLHSELMCPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPT 272
+ D T+ + + + CPICL+ + +C H F CI+ A ++ CP
Sbjct: 85 VDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKCGHDFHLACIL-AWMERSEACPV 143
Query: 273 CRKKLVSKRS 302
C K+LV S
Sbjct: 144 CDKELVLTES 153
>At3g58040.1 68416.m06470 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 308
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 126 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSL 305
S ++ L CP+C +++ + H C++C LR N CPTCR +L + R L
Sbjct: 50 SNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNC---KLRVQNT-CPTCRYELGNIRCL 105
>At3g05250.1 68416.m00573 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 278
Score = 32.3 bits (70), Expect = 0.20
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCI 233
CPICL + C H+FC +CI
Sbjct: 22 CPICLGQFLRESYLDTCFHKFCFNCI 47
>At2g41980.1 68415.m05193 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 305
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 126 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSL 305
S ++ L CP+C +++ + H C+ C LR N CPTCR +L + R L
Sbjct: 47 SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSC---KLRVQNT-CPTCRYELGNIRCL 102
>At2g01150.1 68415.m00024 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 147
Score = 32.3 bits (70), Expect = 0.20
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLV 290
C +CL LK + + +C H F C+ L+ N CP CR L+
Sbjct: 74 CIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120
>At5g64740.1 68418.m08141 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit (Ath-A), Arabidopsis thaliana
Length = 1084
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Frame = +3
Query: 156 CPICLDMLKKTM------TTKECLHRFCNDCIITALRSGNKECPTCRKK 284
C IC D ++ T+ EC C C R GN+ CP C+ +
Sbjct: 39 CQICRDEIELTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTR 87
>At5g19430.1 68418.m02315 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 255
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 156 CPICLDM--LKKTMTTKECLHRFCNDCIITALRSGNKECPTC 275
C ICL L++T K C H +C CI+ + KE PTC
Sbjct: 46 CAICLSEIPLQETAMVKGCEHTYCVTCILR--WASCKESPTC 85
>At5g05280.1 68418.m00567 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 176
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 126 SPRSLHSELMCPICLDMLKKTMTTK---ECLHRFCNDCIITALRSGNKECPTCRKKLVSK 296
SP C ICL + T + +C H F CI T L S + CPTCR+ L+
Sbjct: 103 SPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLS-HSSCPTCRQSLLEH 161
Query: 297 RS 302
++
Sbjct: 162 QT 163
>At4g34370.1 68417.m04883 IBR domain-containing protein similar to
SP|Q94981 Ariadne-1 protein (Ari-1) {Drosophila
melanogaster}; contains Pfam profile PF01485: IBR domain
Length = 597
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 144 SELMCPICL-DMLKKTMTTKECLHRFCNDC 230
S++ C +C+ D+ MT +C H FCN+C
Sbjct: 119 SQMSCDVCMEDLPGDHMTRMDCGHCFCNNC 148
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 31.9 bits (69), Expect = 0.27
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Frame = +3
Query: 156 CPICLDMLKKTMTTK---ECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPD---- 314
C ICL + + + +C H F CI L+S + CP CR K++ + +P+
Sbjct: 1053 CSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKS-HSNCPLCRAKIIVPTTQQPEHHVV 1111
Query: 315 -PNFDLLISKIYPSRDE--YEAHQELVLAKLSMSH 410
N D S + + + H+E V +S H
Sbjct: 1112 VMNLDRFTSNVGSAEGNVVVDDHREEVSVSISSHH 1146
>At4g10150.1 68417.m01660 zinc finger (C3HC4-type RING finger)
family protein RING-H2 finger protein RHA1a, Arabidopsis
thaliana,AF078683
Length = 236
Score = 31.9 bits (69), Expect = 0.27
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Frame = +3
Query: 156 CPICL---DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFD 326
C +CL +K C H F +CI L S + CP CR L+ K SL
Sbjct: 111 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTS-HTTCPLCRLSLIPKPSLDLSHQST 169
Query: 327 LLISKIYPSR-DEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSRKNHDES 503
++S I S E + A ++SH+ + + EG + SQ + + +N S
Sbjct: 170 EIVSSIENSNGGEASTQPDSQSATEAISHT-----DDVEEGNR-DSQEVSKETEENDRNS 223
Query: 504 SNASN 518
S+
Sbjct: 224 VGTSD 228
>At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature
Length = 348
Score = 31.9 bits (69), Expect = 0.27
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Frame = +3
Query: 78 HRTPQEVITDATEIAVSPR---SLHSELMCPICLD---MLKKTMTTKECLHRFCNDCI-- 233
++ +E I I+V+P + C ICLD + +C HRFC+DC+
Sbjct: 71 YKLARETIVSEISISVNPPRQPKATRKTTCKICLDDDINENQMFCVGKCRHRFCSDCMRR 130
Query: 234 ---ITALRSGNKECPTCRKKLVSK 296
+ L CP R K K
Sbjct: 131 HIEVRLLEGSVMRCPHYRCKTTLK 154
>At2g25380.1 68415.m03039 zinc finger protein-related very low
similarity to SP|O95376 Ariadne-2 protein homolog
(ARI-2) (Triad1 protein) {Homo sapiens}; contains Pfam
profile PF01485: IBR (In Between Ring fingers) domain
Length = 350
Score = 31.9 bits (69), Expect = 0.27
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 69 YELHRTPQEVITDATEIAVSPRSLHSELMCPICLD--MLKKTMTTKECLHRFCNDCI-IT 239
Y L R +E+++ ++ + V + E C ICL+ + + T +CLHR+C C+ T
Sbjct: 176 YRLAR--EEIVSKSSSVNV--KEAQGET-CVICLEETVADRMFFTDKCLHRYCFSCVKQT 230
Query: 240 ALRSGNKECPTCR 278
++ C C+
Sbjct: 231 CVKCNGLFCIDCK 243
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 31.5 bits (68), Expect = 0.36
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 147 ELMCPICLDMLK-KTMTTKECLHRFCNDCI 233
EL CP+C ++++ + +K CL +C+ CI
Sbjct: 203 ELKCPLCKEVMRDAALASKCCLKSYCDKCI 232
>At3g62970.1 68416.m07074 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 276
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +3
Query: 156 CPICLDML---KKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLV 290
CP+C + L K +C H DC + CP C K +V
Sbjct: 159 CPVCYEYLFDSVKAAHVMKCGHTMHMDCFEQMINENQYRCPICAKSMV 206
>At3g45470.1 68416.m04910 zinc finger protein-related contains low
similarity to Swiss-Prot:O76924 ariadne-2 protein
(Ari-2) [Drosophila melanogaster]
Length = 222
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCI--ITALRSGNKECPTC 275
C ICL+ K + +CLHR C C+ + ++ N PTC
Sbjct: 6 CVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNGTVPTC 49
>At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518
Length = 191
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 108 ATEIAVSPRSLHSELMCPICLD---MLKKTMTTKECLHRFCNDCI 233
A E V S+H +C IC D ++ + C H+FC DC+
Sbjct: 43 AMEAGVPEISIHMPAICRICFDEDVKAEQMYSVALCGHQFCVDCV 87
>At3g14250.1 68416.m01804 zinc finger protein-related contains weak
similarity to zinc finger proteins and Pfam:PF01485 IBR
domain
Length = 308
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +3
Query: 72 ELHRTPQEVITDATEIAVSPRSLH-SELMCPICLDMLKKT---MTTKECLHRFCNDCIIT 239
++HR ++ EI + S +C IC+D + T C H +C DC +
Sbjct: 66 QVHRNLVTLVKQEPEIKAENEPMEPSRRLCMICMDEKPSSDIFRGTTNCTHAYCTDCTVR 125
Query: 240 ALRSGNKE 263
+ + KE
Sbjct: 126 YVATKIKE 133
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe}; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00628:
PHD-finger, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 1648
Score = 31.5 bits (68), Expect = 0.36
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Frame = +3
Query: 3 LEYI-GKMSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDML 179
L Y+ G M S + ++++ +LS +H T +D E S L + CPIC ++L
Sbjct: 1280 LRYLKGLMKSKQKQESESPDLSS-PIHETVDA--SDPAE-QESENLLKRDEACPICHEIL 1335
Query: 180 KKTMTTKECLHRFCNDCIITAL-RSGNKE-------CPTCRK 281
+ +C H C +C R +E CP CR+
Sbjct: 1336 RNQKMVFQCGHSTCCNCFFAMTERKSVQETLQKWVMCPICRQ 1377
>At1g22510.1 68414.m02812 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK----ECPTCRKKL 287
+C IC + C H FC +CI+ R G+ +CP CR+ +
Sbjct: 9 LCSICHGHFNAPCQSN-CSHWFCGNCIMLVWRHGSTLRPCKCPLCRRPI 56
>At5g51450.1 68418.m06378 zinc finger (C3HC4-type RING finger)
family protein contains similarity to autocrine motility
factor receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 577
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE---CPTCRKKLVSKRS 302
C IC + + K C H F C+ + L G E CPTCRK L R+
Sbjct: 337 CAICREPMAKAKRL-HCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRT 387
>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 617
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI 233
L E C IC ++L +TT C H FC C+
Sbjct: 489 LLKEFSCQICREVLSLPVTTP-CAHNFCKACL 519
>At4g25230.2 68417.m03631 zinc finger (C3HC4-type RING finger)
family protein similar to autocrine motility factor
receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 578
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE---CPTCRKKLVSKRS 302
C IC + + K C H F C+ + L G E CPTCRK L R+
Sbjct: 337 CAICREPMAKAKRL-HCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRT 387
>At4g25230.1 68417.m03630 zinc finger (C3HC4-type RING finger)
family protein similar to autocrine motility factor
receptor [Mus musculus] GI:5931953; contains Pfam
profiles PF00097: Zinc finger, C3HC4 type (RING finger),
PF02845: CUE domain
Length = 578
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKE---CPTCRKKLVSKRS 302
C IC + + K C H F C+ + L G E CPTCRK L R+
Sbjct: 337 CAICREPMAKAKRL-HCNHLFHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRT 387
>At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 132 RSLHSELMCPICLDML---KKTMTTK-ECLHRFCNDCIITALRSGNKECPTCRKKLV 290
+SL++E C ICL L KT T+ C H F N C++ L N CP +L+
Sbjct: 146 KSLNAE-SCSICLQSLVSSSKTAPTRMSCSHVFHNGCLVEWLNRKN-TCPMFHMQLI 200
>At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 772
Score = 31.1 bits (67), Expect = 0.47
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSG--------NKECPTCRKKLV 290
S S + CPICL+ T C H FC CI+ L +G K CP C ++
Sbjct: 238 STPSPVQCPICLEYPLCPQITS-CGHIFCFPCILQYLLTGVDNHKVDCFKRCPLC-FVMI 295
Query: 291 SKRSL 305
S R L
Sbjct: 296 SPREL 300
>At2g31510.1 68415.m03850 IBR domain-containing protein /
ARIADNE-like protein ARI7 (ARI7) identical to
ARIADNE-like protein ARI7 [Arabidopsis thaliana]
GI:29125028; contains similarity to Swiss-Prot:Q94981
ariadne-1 protein (Ari-1) [Drosophila melanogaster];
contains Pfam profile PF01485: IBR domain
Length = 562
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 114 EIAVSPRSLHSELMCPICLDML-KKTMTTKECLHRFCNDCIITALRSGNKECPTC 275
E V P S SEL C IC D + + + C H FC C + + + P C
Sbjct: 123 ESHVVPPSDDSELTCGICFDSYPPEKIASVSCGHPFCTTCWTGYISTTINDGPGC 177
>At1g72175.1 68414.m08345 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 185
Score = 31.1 bits (67), Expect = 0.47
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK----ECPTCRKKL 287
+C IC C H FC +CI+ R G+ +CP CR+ +
Sbjct: 9 LCSICHSHFTAPCQAN-CSHWFCGNCIMLVWRHGSTLQPCKCPLCRRHI 56
>At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 622
Score = 31.1 bits (67), Expect = 0.47
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 6/134 (4%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI------ITALRSGNKECPTCRKKLVSKR 299
L E C IC +L +TT C H FC C+ IT LR + +KL +K+
Sbjct: 492 LLKEFSCQICRKVLSLPVTTP-CAHNFCKACLEAKFAGITQLRDRSNGV----RKLRAKK 546
Query: 300 SLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQR 479
++ P +S+ + E ++ S +A + S + + ++ P
Sbjct: 547 NIMTCPCCTTDLSEFLQNPQVNREMME-IIENFKKSEEEAEVAESSNISEEEEEESEPPT 605
Query: 480 SRKNHDESSNASNS 521
+ D +S S
Sbjct: 606 KKIKMDNNSVGDTS 619
>At1g60190.1 68414.m06780 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 686
Score = 31.1 bits (67), Expect = 0.47
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 132 RSLH-SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVS 293
RSL+ +L CPI L+++ + E H + I SGN CP K LVS
Sbjct: 275 RSLNVDDLRCPISLEIMSDPVVL-ESGHTYDRSSITKWFASGNITCPKTGKTLVS 328
>At1g57730.1 68414.m06550 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 174
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +3
Query: 156 CPICL-DMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCRKKL 287
C ICL DM + +E C H F NDCI L N CP CR L
Sbjct: 116 CAICLEDMSQDVHDYQEMPNCPHVFHNDCIYKWLGHSNL-CPLCRTVL 162
>At4g27880.1 68417.m04002 seven in absentia (SINA) family protein
similar to siah-1A protein [Mus musculus] GI:297035;
contains Pfam profile PF03145: Seven in absentia protein
family
Length = 327
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSL 305
S++ L CP+C + + H C+ C + + CPTCR++L R L
Sbjct: 57 SVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRV----HNRCPTCRQELGDIRCL 109
>At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger)
family protein zinc finger protein, Arabidopsis
thaliana, gb:L76926
Length = 225
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 144 SELMCPICL---DMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSL 305
++ C +CL +K C H F +CI L S + CP CR L+ K S+
Sbjct: 93 NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTS-HTTCPLCRLSLIPKPSV 148
>At3g60220.1 68416.m06730 zinc finger (C3HC4-type RING finger)
family protein (ATL4) contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 334
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 156 CPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRS 302
C +CL + + C H F DCI L S N+ CP CR L + S
Sbjct: 117 CAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS-NQTCPLCRSPLFASES 167
>At3g10910.1 68416.m01313 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 181
Score = 30.7 bits (66), Expect = 0.62
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 156 CPICLDMLK---KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLV 290
C ICL + K +C H F CI T L S CPTCR+ L+
Sbjct: 114 CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLS-RSSCPTCRQSLL 160
>At1g57800.1 68414.m06558 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 660
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 90 QEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCI 233
+E I A + R L E C IC ++ +TT C H FC C+
Sbjct: 507 REAIKSANPNTMRARLL-KEFKCQICQKVMTNPVTTP-CAHNFCKACL 552
Score = 30.3 bits (65), Expect = 0.82
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 174 MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLL 332
ML + + C H C C + + G++ C TCR + P N ++
Sbjct: 163 MLVWFLESTPCGHNACLKCFLKWMGQGHRSCGTCRSVIPESMVTNPRINLSIV 215
>At1g17145.1 68414.m02090 expressed protein
Length = 335
Score = 30.7 bits (66), Expect = 0.62
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +3
Query: 126 SPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNK----ECPTCR 278
+P S H CPIC ++ C+ C +C + ++S N +CP C+
Sbjct: 53 TPSSHHDLEECPICFLYYPSLNRSRCCMKSICTECFL-RMKSPNSAQPTQCPFCK 106
>At5g09870.1 68418.m01141 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit (Ath-A), Arabidopsis thaliana
Length = 1069
Score = 30.3 bits (65), Expect = 0.82
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Frame = +3
Query: 78 HRTPQEVITDATEIAVSPRSLH--SELMCPICLDMLKKTM------TTKECLHRFCNDCI 233
H + V+ +A E A RS+ S C IC D ++ ++ EC C C
Sbjct: 12 HNRNEFVLINADESA-RIRSVEELSGQTCQICGDEIELSVDGESFVACNECAFPVCRPCY 70
Query: 234 ITALRSGNKECPTCRKK 284
R GN+ CP C+ +
Sbjct: 71 EYERREGNQSCPQCKTR 87
>At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427; contains Pfam
profile PF03105: SPX domain, weak hit to PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 335
Score = 30.3 bits (65), Expect = 0.82
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCIITA 242
L +L C ICL+ + K C H FCN C +A
Sbjct: 225 LEYDLTCAICLETVFNPYALK-CGHIFCNSCACSA 258
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +3
Query: 156 CPICLDMLKKT------MTTKECLHRFCNDCIITALRSGNKECPTC 275
C IC D ++ T + EC C C R GN+ CP C
Sbjct: 39 CKICRDEIELTDNGEPFIACNECAFPTCRPCYEYERREGNQACPQC 84
>At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 198
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKE---CLHRFCNDCIITALRSGNKECPTCRK 281
C ICL+ + ++ + C H + C+ + N CP CRK
Sbjct: 150 CAICLENMSRSENYCQMPYCKHCYHEGCVTKWVIGHNNSCPLCRK 194
>At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 623
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 138 LHSELMCPICLDMLKKTMTTKECLHRFCNDCI 233
L E C IC +L +TT C H FC C+
Sbjct: 492 LLKEFSCQICRKVLSLPVTTP-CAHNFCKACL 522
>At5g45290.1 68418.m05560 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 545
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 87 PQEVITDATEIAVSPRSLHSE-LMCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGN 257
P +V+ D I + +S + C ICL ++ ++ T C H F C+ L+ +
Sbjct: 467 PNDVV-DLLPIKLYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIH 525
Query: 258 KECPTCR 278
+ CP CR
Sbjct: 526 RVCPLCR 532
>At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518 and a IBR domain,
Pfam:PF01485
Length = 316
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCI 233
CP+C + + + C HRFC DCI
Sbjct: 157 CPVCYEHVTSDEKFEVPGCFHRFCFDCI 184
>At4g10940.1 68417.m01779 PHD finger family protein contains Pfam
profile: PF00097 zinc finger, C3HC4 type
Length = 192
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKK 284
C IC+D++ C H FC +CI N CP C+++
Sbjct: 31 CGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMNL-CPLCQRE 72
>At4g09560.1 68417.m01571 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 431
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +3
Query: 144 SELMCPICLDMLKK--TMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
+ ++C ICL+ +K + C H+F C+ L CP C++ S + +P
Sbjct: 213 TSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPPS 272
Query: 318 NFDLLISK 341
+S+
Sbjct: 273 EHTPFLSR 280
>At4g00305.1 68417.m00038 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 126
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = +3
Query: 75 LHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLK---KTMTTKECLHRFCNDCIITAL 245
+ + P + + AT+ ++ C IC D + + C+H + CI +
Sbjct: 44 IDKIPMDDMLPATKFEDISSRVNPPESCRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWI 103
Query: 246 RSGNKECPTCRKKLV 290
+ CP CR +V
Sbjct: 104 QDDKMTCPLCRTPIV 118
>At3g20010.1 68416.m02531 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1047
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 144 SELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKK 284
S +C C + +K + T C H FC +C++ + CP R K
Sbjct: 747 SSAICYECNEPPEKPVVTL-CGHIFCYECVLEYITGDENTCPVPRCK 792
>At2g45135.1 68415.m05617 expressed protein ; expression supported
by MPSS
Length = 304
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCII 236
C CL + + C+HRFC CI+
Sbjct: 179 CRRCLSVSSPVVIADPCMHRFCVKCIL 205
>At2g38185.4 68415.m04692 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 872
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRF-CNDCIITALRSGNKECPTCRKKL 287
S S +C IC D+ + C H C +C T ++ + CP CR+K+
Sbjct: 384 SNRSRRLCAICFDVPRDCFFLP-CGHSVSCYECG-TTMQEADGSCPICRRKM 433
>At2g38185.3 68415.m04691 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 346
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRF-CNDCIITALRSGNKECPTCRKKL 287
S S +C IC D+ + C H C +C T ++ + CP CR+K+
Sbjct: 288 SNRSRRLCAICFDVPRDCFFLP-CGHSVSCYECG-TTMQEADGSCPICRRKM 337
>At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRF-CNDCIITALRSGNKECPTCRKKL 287
S S +C IC D+ + C H C +C T ++ + CP CR+K+
Sbjct: 383 SNRSRRLCAICFDVPRDCFFLP-CGHSVSCYECG-TTMQEADGSCPICRRKM 432
>At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 441
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRF-CNDCIITALRSGNKECPTCRKKL 287
S S +C IC D+ + C H C +C T ++ + CP CR+K+
Sbjct: 383 SNRSRRLCAICFDVPRDCFFLP-CGHSVSCYECG-TTMQEADGSCPICRRKM 432
>At2g16090.1 68415.m01845 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 593
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 144 SELMCPICL-DMLKKTMTTKECLHRFCNDC 230
S + C IC+ D+ +T +C H FCN+C
Sbjct: 120 SMMSCDICVEDVPGYQLTRMDCGHSFCNNC 149
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 1287
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 153 MCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECP 269
+C IC D + + + C H FC CI L + CP
Sbjct: 992 ICGICNDAPEDAVASV-CGHVFCKQCIYERLTGDSNHCP 1029
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVS 293
E CPI +D++K + + + I T + SGNK CP L +
Sbjct: 34 EFQCPISIDLMKDPVIISTGI-TYDRVSIETWINSGNKTCPVTNTVLTT 81
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLH-RFCNDCIITALRSGNKECPTCRKKL 287
C ICLD + + C H C C+ ++S N CP CR K+
Sbjct: 387 CAICLDAPSEAVCVP-CGHVAGCMSCL-KEIKSKNWGCPVCRAKI 429
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLH-RFCNDCIITALRSGNKECPTCRKKL 287
C ICLD + + C H C C+ ++S N CP CR K+
Sbjct: 411 CAICLDAPSEAVCVP-CGHVAGCMSCL-KEIKSKNWGCPVCRAKI 453
>At2g25360.1 68415.m03035 zinc finger protein-related contains weak
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 373
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 108 ATEIAVSPRSLHSELMCPICLDML---KKTMTTKECLHRFCNDCI 233
A E VS + +E+ C IC + + TT++C+HR C C+
Sbjct: 75 AREAIVSRDDVKAEI-CSICFEETEGERMFFTTEKCVHRHCFPCV 118
>At1g78280.1 68414.m09122 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam PF00646: F-box
domain; contains Pfam PF02373: jmjC domain; similar to
apoptotic cell clearance receptor PtdSerR (GI:11037740)
[Mus musculus]
Length = 916
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 402 CLV*PEPVLGEPRIRPYWDISWI*AGQSWGPVEENVWTLISFY 274
C++ E VLG I WD + +SW VE+ VW+L++ Y
Sbjct: 878 CILHEENVLGS--IFSIWDE--LRTAESWEQVEQTVWSLLNTY 916
>At1g70910.1 68414.m08182 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 161
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 69 YELHRTPQEVITDATEIAVSPRSLHSELM--CPICLDMLKKTMTTKECLHRFCNDCIITA 242
+E R P + + ++ ++P+ M C +CL + C H F DCI
Sbjct: 84 FEAKRVPGPLYI-SYDVTLTPQIFEEPDMETCGLCLLEEQHLFDMPNCAHVFHGDCIDKW 142
Query: 243 LRSGNKECPTC 275
L + N CP C
Sbjct: 143 LSTSN-NCPLC 152
>At1g09060.2 68414.m01011 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +3
Query: 102 TDATEIAVSPRSLHSELMCPICLDMLKKT----MTTKECLHR-FCNDCIIT-----ALRS 251
T E + + + +E + IC +K ++ +C R FC++C+ +L
Sbjct: 185 TSPMEYSAASTDVSAESLGEICHQCQRKDRERIISCLKCNQRAFCHNCLSARYSEISLEE 244
Query: 252 GNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKL 398
K CP CR K LR D + I +I P D+ + L+ A L
Sbjct: 245 VEKVCPACRGLCDCKSCLRSDNTIKVRIREI-PVLDKLQYLYRLLSAVL 292
>At1g09060.1 68414.m01010 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 930
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +3
Query: 102 TDATEIAVSPRSLHSELMCPICLDMLKKT----MTTKECLHR-FCNDCIIT-----ALRS 251
T E + + + +E + IC +K ++ +C R FC++C+ +L
Sbjct: 185 TSPMEYSAASTDVSAESLGEICHQCQRKDRERIISCLKCNQRAFCHNCLSARYSEISLEE 244
Query: 252 GNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKL 398
K CP CR K LR D + I +I P D+ + L+ A L
Sbjct: 245 VEKVCPACRGLCDCKSCLRSDNTIKVRIREI-PVLDKLQYLYRLLSAVL 292
>At5g66160.2 68418.m08334 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical
to cDNA ReMembR-H2 protein JR700 mRNA, complete cds
GI:6942146
Length = 290
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCR 278
C ICL+ + +++ C H F +CI + L CP C+
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCK 274
>At5g66160.1 68418.m08335 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326; identical
to cDNA ReMembR-H2 protein JR700 mRNA, complete cds
GI:6942146
Length = 310
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCR 278
C ICL+ + +++ C H F +CI + L CP C+
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCK 274
>At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger)
family protein similar to SP:O54965 RING finger protein
13 {Mus musculus} RING zinc finger protein
Length = 234
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 153 MCPIC-LDMLK-KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLV 290
MC IC D ++ +T C H++ DCI L++ +K C C+++++
Sbjct: 187 MCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQN-SKLCCVCQREVI 233
>At5g05170.1 68418.m00550 cellulose synthase, catalytic subunit
(Ath-B) nearly identical to gi:2827143, cellulose
synthase, catalytic subunit (Ath-B)
Length = 1065
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKE------CLHRFCNDCIITALRSGNKECPTCRKK 284
C IC D + KT+ C C C + GN+ CP C+ +
Sbjct: 20 CQICSDNVGKTVDGDRFVACDICSFPVCRPCYEYERKDGNQSCPQCKTR 68
>At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 532
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 156 CPICL-DMLKKTMTTKECLHRFCNDCIIT 239
C IC D + M + +C H+FC+ C+ T
Sbjct: 207 CSICCEDRQSEMMLSLKCTHKFCSHCMKT 235
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/81 (29%), Positives = 35/81 (43%)
Frame = +3
Query: 63 SLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITA 242
SLY H PQ ++ E + P S+ S+ C + +D LH F + I
Sbjct: 125 SLYIAH--PQSLV-HLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKR 181
Query: 243 LRSGNKECPTCRKKLVSKRSL 305
+ G K K+LVS RS+
Sbjct: 182 IDLGGKAFTNYLKELVSYRSI 202
>At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF01485:IBR domain
Length = 384
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Frame = +3
Query: 129 PRSLHSELMCPICLDM-LKKTMT--TKECLHRFCNDCI-----ITALRSGNKECPT--CR 278
P H + C IC D + M +C H FC++C+ ++ L+ CP+ C+
Sbjct: 144 PALFHPKKTCTICFDDDINADMMFYIDQCGHMFCSECVKRHIEVSLLQGSLITCPSYRCK 203
Query: 279 KKL 287
KL
Sbjct: 204 SKL 206
>At5g03200.1 68418.m00268 zinc finger (C3HC4-type RING finger)
family protein contains weak similarity to zinc finger
proteins
Length = 337
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHR-FCNDCIITALRSGNKECPTCRK 281
C +CL + T T C H C+ C ALR CP CR+
Sbjct: 285 CVVCLSEPRDT-TVLPCRHMCMCSGCA-KALRFQTNLCPVCRQ 325
>At3g54360.1 68416.m06008 expressed protein DNA-binding Mel-18
protein, Homo sapiens, PIR:JN0717
Length = 405
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLI 335
C +C +L ++ C H FC C+ + K+CP C + S+ D N ++
Sbjct: 108 CMLCQALLYESSRCVPCTHVFCKVCL-----TRFKDCPLCGADI---ESIEVDENLQKMV 159
Query: 336 SK 341
+
Sbjct: 160 DQ 161
>At1g22670.1 68414.m02833 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 422
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 CPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRK 281
C ICL+ ++ + C H+F C+ + L S CP C++
Sbjct: 232 CAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKR 275
>At5g54020.1 68418.m06719 expressed protein
Length = 556
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 165 CLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKL 287
C++ L + ++ HR N G+KEC CRKK+
Sbjct: 172 CIEKLPRVISINRHDHRI-NHTFHLGQGEGDKECGVCRKKI 211
>At4g28370.1 68417.m04061 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECL-----HRFCNDCIITALRSGNKECPTCRKKL 287
C IC+ + T +C+ H F + C+ + ECPTCR+ L
Sbjct: 416 CVICMTAIDLRQHTSDCMVTPCEHFFHSGCLQRWMDI-KMECPTCRRSL 463
>At2g04240.2 68415.m00413 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLV 290
C +CL + + +C H F C+ + N CP CR LV
Sbjct: 103 CSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149
>At2g04240.1 68415.m00412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 162
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +3
Query: 156 CPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLV 290
C +CL + + +C H F C+ + N CP CR LV
Sbjct: 103 CSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRTPLV 149
>At1g79810.2 68414.m09319 Pex2/Pex12 N-terminal domain-containing
protein / zinc finger (C3HC4-type RING finger) family
protein contains Pfam profiles PF00097: zinc finger
C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino
terminal region
Length = 282
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRS-GNKECPTCRKKLVS 293
CPIC C HR+C CI T S + C C + +V+
Sbjct: 226 CPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVA 272
>At1g79810.1 68414.m09318 Pex2/Pex12 N-terminal domain-containing
protein / zinc finger (C3HC4-type RING finger) family
protein contains Pfam profiles PF00097: zinc finger
C3HC4 type (RING finger), PF04757: Pex2/Pex12 amino
terminal region
Length = 333
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +3
Query: 156 CPICLDMLKKTMTTKECLHRFCNDCIITALRS-GNKECPTCRKKLVS 293
CPIC C HR+C CI T S + C C + +V+
Sbjct: 277 CPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVA 323
>At5g42940.1 68418.m05235 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 691
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 156 CPICLDMLKK--TMTTKECLHRFCNDCIITALRSGNKECPTCR 278
C +C + + M T EC H F + CI L+ N CP C+
Sbjct: 637 CCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNL-CPICK 678
>At5g01450.1 68418.m00058 expressed protein
Length = 444
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Frame = +3
Query: 96 VITDATEIAVSPRSLHSEL--MCPICLDMLKKTMTTKECLHRFCNDCII-----TALRSG 254
++T E+ + HS +C IC D ++C C C+ T +
Sbjct: 371 ILTSTEELEGAHGEGHSSTRYLCAICYD------APRDCFFLSCGHCVACFQCGTRIAET 424
Query: 255 NKECPTCRKKL 287
+ CP CRKK+
Sbjct: 425 SGFCPVCRKKI 435
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 108 ATEIAVSPRSLHSELMCPICLDML---KKTMTTKECLHRFCNDCI 233
A E VS S+ C IC + + +K + C H+FC +C+
Sbjct: 139 AMETVVSEISICMPATCSICFNNVLEAEKMFSVAICGHQFCVECV 183
>At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 683
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Frame = +3
Query: 156 CPICLDMLKK----TMTTKECLHRFCNDCIIT-ALRSGNK--ECPTCRKKLV 290
C ICL +K + T EC H F C+ + A + N+ CP C L+
Sbjct: 130 CGICLQSVKSGQGTAIFTAECSHTFHFPCVTSRAAANHNRLASCPVCGSSLL 181
>At1g78420.1 68414.m09138 expressed protein
Length = 401
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGN---KECPTCR 278
S H CPIC ++ C+ C +C + + +CP C+
Sbjct: 52 SCHDLEECPICFLYYPSLNRSRCCMKSICTECFLQMKNPNSARPTQCPFCK 102
>At1g49230.1 68414.m05519 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 219
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +3
Query: 156 CPICLDML---KKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLV 290
C ICL ++ C H F CI L S + CPTCR L+
Sbjct: 131 CAICLSEFVAEERVKLLPTCHHGFHVRCIDKWL-SSHSSCPTCRHCLI 177
>At5g62560.1 68418.m07851 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 559
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 312 DPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQSQNRPQRSRKN 491
DP ++L S +Y+A E + A+ S S + + S+T G QS P R+
Sbjct: 140 DPEPEILPPVEENSPSDYDAVMEAIRARSKNSMSPTTSLESVTIG---QSSYHPVRAVSM 196
Query: 492 HDESSNASNS 521
S+ +S+S
Sbjct: 197 FSSSTTSSSS 206
>At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 655
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Frame = +3
Query: 156 CPICL-DMLKKTM-TTKECLHRFCNDCI-----ITALRSGNKECP--TCRKKLV 290
C IC D++ + M + +C HRFC C+ + L +CP C+ +LV
Sbjct: 301 CAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLHGMAPKCPHDGCKSELV 354
>At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein
(ZFP2) identical to zinc finger protein 2 (ZFP2)
GI:790674 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 150
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 315 PNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNS 434
PN L +S PS ++ + ELVL SMS S +S NS
Sbjct: 5 PNTSLRLS--LPSYKNHQLNLELVLEPSSMSSSSSSSTNS 42
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.1 bits (57), Expect = 7.7
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = +3
Query: 279 KKLVSKRSLRPDPNFDLLISKIYPSRDEYEAHQELVLAKLSMSHSQASLVNSITEGIKLQ 458
KK K S+ P P S P AH + SM +L S T+ L+
Sbjct: 373 KKSNRKGSMTPPPQSHHAPSPPIPDSLISPAHAPV---SFSMKRISPALAPSPTQVFPLR 429
Query: 459 SQNRPQRSRK 488
S +RP +SRK
Sbjct: 430 SSSRPSKSRK 439
>At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit
(IRX5) nearly identical to cellulose synthase
[Arabidopsis thaliana] GI:27462651; contains Pfam
profile PF03552: Cellulose synthase
Length = 1049
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = +3
Query: 135 SLHSELMCPICLDMLKKT------MTTKECLHRFCNDCIITALRSGNKECPTC 275
S S +C +C D +K + C++ C C +GNK CP C
Sbjct: 16 SSFSAKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQC 68
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 6/49 (12%)
Frame = +3
Query: 156 CPICLDMLKKTM------TTKECLHRFCNDCIITALRSGNKECPTCRKK 284
C IC D + T+ EC C C R G + CP C+ +
Sbjct: 37 CEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTR 85
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHR-FCNDCIITALRSGNKECPTCRKKL 287
E C +CL + ++ C H+ C+ C + ++CP+CR K+
Sbjct: 757 ERECVMCLSE-EMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKI 803
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 147 ELMCPICLDMLKKTMTTKECLHR-FCNDCIITALRSGNKECPTCRKKL 287
E C +CL + ++ C H+ C+ C + ++CP+CR K+
Sbjct: 757 ERECVMCLSE-EMSVIFLPCAHQVLCSKCNQLHEKEAMEDCPSCRAKI 803
>At3g53690.1 68416.m05929 zinc finger (C3HC4-type RING finger)
family protein contains a Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518 and a IBR domain,
Pfam:PF01485
Length = 320
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 156 CPICLDM--LKKTMTTKECLHRFCNDCI 233
C IC+D + ++ C H +CNDC+
Sbjct: 115 CEICVDSKSIIESFRIGGCSHFYCNDCV 142
>At3g09660.1 68416.m01145 minichromosome maintenance family protein
/ MCM family protein similar to SP|P49717 DNA
replication licensing factor MCM4 (CDC21 homolog) {Mus
musculus}; contains Pfam profile PF00493: MCM2/3/5
family
Length = 777
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 50 NMGAIPLRVTPYSTRSDHRRDG--NSGLPTKSSQRADVPNLFGYAQKDNDY 196
N G L + S ++ R+ NS + S+Q ADV +L+ ++Q+D ++
Sbjct: 289 NQGFYYLFIEAVSVKNTKRQSAFENSEDSSSSAQTADVGDLYSFSQRDLEF 339
>At1g66620.1 68414.m07570 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 313
Score = 27.1 bits (57), Expect = 7.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 150 LMCPICLDMLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRS 302
L CPIC L + + H C+ C T LR+ +CP+C + + RS
Sbjct: 42 LDCPICCHALTSPIFQCDNGHIACSSC-CTKLRN---KCPSCALPIGNFRS 88
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 27.1 bits (57), Expect = 7.7
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 180 KKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKI-YPSR 356
K T T + CL FC++ I++ G K K L + L +F+++ KI P
Sbjct: 178 KSTETGRLCLFGFCSENCISSYNYGEK----VMKNLEEVKELLSKKHFEVVAHKIPVPKV 233
Query: 357 DEYEAH 374
+E H
Sbjct: 234 EEKNIH 239
>At1g35630.1 68414.m04427 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 318
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 144 SELMCPICLD--MLKKTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
+ + C IC+D + + + C H++ CI + L CP C++ + + P
Sbjct: 229 TSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGNDVPPAS 288
Query: 318 NFDLLIS 338
LIS
Sbjct: 289 ETTPLIS 295
>At1g35625.1 68414.m04426 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 279
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 144 SELMCPICLDMLK--KTMTTKECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDP 317
+ + C IC+D + + + C H++ CI + L CP C++ + + P
Sbjct: 190 TSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGNDVPPAS 249
Query: 318 NFDLLIS 338
LIS
Sbjct: 250 ETTPLIS 256
>At1g05055.1 68414.m00506 basic transcription factor 2, 44kD
subunit-related contains weak similarity to
Swiss-Prot:Q13888 TFIIH basal transcription factor
complex p44 subunit (Basic transcription factor 2 44 kDa
subunit, BTF2-p44, General transcription factor IIH
polypeptide 2) [Homo sapiens]
Length = 421
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 189 MTTKECLHRFCNDCIITALRSGNKECPTC 275
+T ++C H FC DC I + CP C
Sbjct: 380 VTCRKCKHYFCLDCDI-YIHESLHNCPGC 407
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,293,162
Number of Sequences: 28952
Number of extensions: 233691
Number of successful extensions: 1034
Number of sequences better than 10.0: 195
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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