Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113475-1|AAM29480.1|  168|Drosophila melanogaster RE43724p pro...   229   2e-60
AE014134-1056|AAF52346.1|  168|Drosophila melanogaster CG5972-PA...   229   2e-60

>AY113475-1|AAM29480.1|  168|Drosophila melanogaster RE43724p
           protein.
          Length = 168

 Score =  229 bits (560), Expect = 2e-60
 Identities = 107/136 (78%), Positives = 123/136 (90%)
 Frame = +3

Query: 114 MAATLKPYLTAVRHTLTAAMCLEHFSSQVVEKYTKPEVEVRTSKELLLNPVVISRNSNEK 293
           MAATLKPYLTAVRH+LTAAMCL+ F SQVVE++ KPEVE+ +SKEL+L PVV+SRN  EK
Sbjct: 1   MAATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREK 60

Query: 294 VLIESSINSIRVSIMIKQADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITN 473
           VLIE SINS+RVSI +KQADEIE+ILC KF RFMM RAE+F++LRRKP++GY ISFLITN
Sbjct: 61  VLIEPSINSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITN 120

Query: 474 FHTEQMYKHKLVDFVI 521
           FHTEQMYKHKLVDFVI
Sbjct: 121 FHTEQMYKHKLVDFVI 136


>AE014134-1056|AAF52346.1|  168|Drosophila melanogaster CG5972-PA
           protein.
          Length = 168

 Score =  229 bits (560), Expect = 2e-60
 Identities = 107/136 (78%), Positives = 123/136 (90%)
 Frame = +3

Query: 114 MAATLKPYLTAVRHTLTAAMCLEHFSSQVVEKYTKPEVEVRTSKELLLNPVVISRNSNEK 293
           MAATLKPYLTAVRH+LTAAMCL+ F SQVVE++ KPEVE+ +SKEL+L PVV+SRN  EK
Sbjct: 1   MAATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREK 60

Query: 294 VLIESSINSIRVSIMIKQADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITN 473
           VLIE SINS+RVSI +KQADEIE+ILC KF RFMM RAE+F++LRRKP++GY ISFLITN
Sbjct: 61  VLIEPSINSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITN 120

Query: 474 FHTEQMYKHKLVDFVI 521
           FHTEQMYKHKLVDFVI
Sbjct: 121 FHTEQMYKHKLVDFVI 136


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,136,335
Number of Sequences: 53049
Number of extensions: 372922
Number of successful extensions: 971
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)