Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A11f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   1.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.7  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
            protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 20/83 (24%), Positives = 30/83 (36%)
 Frame = -3

Query: 255  CSVCERNVKTLMYKVW*SLSTRDGRRLTCRRCAPSKLTGNRWGHAPSIDPMLRQQIFPLK 76
            C+VC  + K L  K           +  C+ CA    + N    A    PML   + P K
Sbjct: 774  CTVCTCDAKYLEIKC----KRIYNEKQCCKNCARVDYSMNGTYSADDEVPMLLHGVVPRK 829

Query: 75   FAQHRTASVNTHHGTCKTKYHSQ 7
                ++A      G C   Y ++
Sbjct: 830  EIPAKSAEQILAEGGCPNLYDAR 852



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 53  LAVRCCANFNGNICCRNIGSMD 118
           L ++C   +N   CC+N   +D
Sbjct: 784 LEIKCKRIYNEKQCCKNCARVD 805


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 240 VRKRNIRERITNIYRQY 290
           +RK +I ERI  IY Q+
Sbjct: 46  IRKEHIFERIRTIYNQF 62


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 240 VRKRNIRERITNIYRQY 290
           V+K++I E I +IYRQ+
Sbjct: 6   VQKKHITEIIADIYRQF 22


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 293 FFFLSYITYVYKICLLYVIG 352
           F  +  + Y Y  CL+Y+IG
Sbjct: 210 FKIIQVVPYCYINCLIYLIG 229


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 35  PWCVLTLAVRCCANFNGNIC 94
           PW   T + RC   F   IC
Sbjct: 524 PWANCTASTRCWEVFMDGIC 543


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 301 FKLHHLRLQNMFIICNRDVERVK 369
           F    L+   + + CNRD+ R K
Sbjct: 95  FMTSQLKPDKVTVFCNRDLGREK 117


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 301 FKLHHLRLQNMFIICNRDVERVK 369
           F    L+   + + CNRD+ R K
Sbjct: 95  FMTSQLKPDKVTVFCNRDLGREK 117


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 301 FKLHHLRLQNMFIICNRDVERVK 369
           F    L+   + + CNRD+ R K
Sbjct: 95  FMTSQLKPDKVTVFCNRDLGREK 117


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 301 FKLHHLRLQNMFIICNRDVERVK 369
           F    L+   + + CNRD+ R K
Sbjct: 95  FMTSQLKPDKVTVFCNRDLGREK 117


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 154 VEVDGESVGSCAVH 113
           V + GES G+ AVH
Sbjct: 181 VTIFGESAGAAAVH 194


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 154 VEVDGESVGSCAVH 113
           V + GES G+ AVH
Sbjct: 183 VTIFGESAGAAAVH 196


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 154 VEVDGESVGSCAVH 113
           V + GES G+ AVH
Sbjct: 181 VTIFGESAGAAAVH 194


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 154 VEVDGESVGSCAVH 113
           V + GES G+ AVH
Sbjct: 183 VTIFGESAGAAAVH 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,587
Number of Sequences: 336
Number of extensions: 2474
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)