Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A11f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   2.0  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    24   3.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.2  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   8.2  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 47  LTLAVRCCANFNGNICCRN 103
           L +  +CC N NGN C +N
Sbjct: 156 LRMGDKCCRNGNGNGCGQN 174


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 87  IFVVVTLDLWTAHDPTDSPSTSTGHS 164
           IFVVVTL+L  AH   D      G S
Sbjct: 11  IFVVVTLELVVAHPGKDVLGCHNGTS 36


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +2

Query: 239  RSQTEHSRTDHEYLQTICFFFLSYITYVYKICLLYVIGMWNVLNVVFYI 385
            +S+T  +  D+  +  IC F    +  ++ +   Y I  WN+ + V  I
Sbjct: 1647 QSETFSAVLDYLNMIFICIFSSECLMKIFALRYHYFIEPWNLFDFVVVI 1695


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 94  TNISVEIRTASHSKCQHTPRH 32
           T+I V I   SH K +  P H
Sbjct: 276 TSIDVAIEDGSHIKIEERPEH 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,125
Number of Sequences: 2352
Number of extensions: 9483
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)