Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2936|AAF55855.2|  196|Drosophila melanogaster CG17284-P...    29   3.8  
BT011032-1|AAR30192.1|  330|Drosophila melanogaster RE45514p pro...    29   5.1  
AE014297-2212|AAF55318.2|  330|Drosophila melanogaster CG14883-P...    29   5.1  
AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p pro...    28   6.7  
AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA...    28   6.7  
AE013599-1127|AAO41426.1|  970|Drosophila melanogaster CG12052-P...    28   6.7  
AB107342-1|BAC67647.1|  970|Drosophila melanogaster Lola protein...    28   6.7  
AB107322-1|BAC67627.1|  970|Drosophila melanogaster Lola protein...    28   6.7  
AB107302-1|BAC67607.1|  970|Drosophila melanogaster Lola protein...    28   6.7  
AB107282-1|BAC67587.1|  970|Drosophila melanogaster Lola protein...    28   6.7  

>AE014297-2936|AAF55855.2|  196|Drosophila melanogaster CG17284-PA,
           isoform A protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -2

Query: 199 EHTRRPTPYLSALCPVEVDGESVGSCAVHRSNVTTTNISVEIRTASHSK 53
           +H ++P  +LS+ C V+ + +++ SC        +TN + E+R     K
Sbjct: 26  DHAKQPK-FLSSCCDVQKNDKAINSCRKSLLGNNSTNSNGEVRNLKSDK 73


>BT011032-1|AAR30192.1|  330|Drosophila melanogaster RE45514p
          protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 2  LFCE*YLVLQVPWCVLTLAVRCCAN 76
          LFC     L +PWC LTL V C A+
Sbjct: 34 LFCN----LAIPWCTLTLLVVCIAS 54


>AE014297-2212|AAF55318.2|  330|Drosophila melanogaster CG14883-PA
          protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 2  LFCE*YLVLQVPWCVLTLAVRCCAN 76
          LFC     L +PWC LTL V C A+
Sbjct: 34 LFCN----LAIPWCTLTLLVVCIAS 54


>AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p
           protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 204 ITRLYTLVF*HYVRKRNIRERITNIYRQYXXXXXXTSPTFTKYVYYM 344
           +TR Y L + H V +RN R ++  +Y         T  +F  +  Y+
Sbjct: 490 VTRTYQLAYCHTVLERNARRKLATVYGHEKCMPDETLESFFPFDPYV 536


>AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA,
           isoform A protein.
          Length = 611

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 204 ITRLYTLVF*HYVRKRNIRERITNIYRQYXXXXXXTSPTFTKYVYYM 344
           +TR Y L + H V +RN R ++  +Y         T  +F  +  Y+
Sbjct: 490 VTRTYQLAYCHTVLERNARRKLATVYGHEKCMPDETLESFFPFDPYV 536


>AE013599-1127|AAO41426.1|  970|Drosophila melanogaster CG12052-PI,
           isoform I protein.
          Length = 970

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 206 HQTLYISVLTLRSQTEHSRTDHEYLQTI 289
           HQT++I  +   SQ  H +  H  LQT+
Sbjct: 617 HQTIHIEEVPQTSQQHHQQQHHHQLQTV 644


>AB107342-1|BAC67647.1|  970|Drosophila melanogaster Lola protein
           isoform K protein.
          Length = 970

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 206 HQTLYISVLTLRSQTEHSRTDHEYLQTI 289
           HQT++I  +   SQ  H +  H  LQT+
Sbjct: 617 HQTIHIEEVPQTSQQHHQQQHHHQLQTV 644


>AB107322-1|BAC67627.1|  970|Drosophila melanogaster Lola protein
           isoform K protein.
          Length = 970

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 206 HQTLYISVLTLRSQTEHSRTDHEYLQTI 289
           HQT++I  +   SQ  H +  H  LQT+
Sbjct: 617 HQTIHIEEVPQTSQQHHQQQHHHQLQTV 644


>AB107302-1|BAC67607.1|  970|Drosophila melanogaster Lola protein
           isoform K protein.
          Length = 970

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 206 HQTLYISVLTLRSQTEHSRTDHEYLQTI 289
           HQT++I  +   SQ  H +  H  LQT+
Sbjct: 617 HQTIHIEEVPQTSQQHHQQQHHHQLQTV 644


>AB107282-1|BAC67587.1|  970|Drosophila melanogaster Lola protein
           isoform K protein.
          Length = 970

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 206 HQTLYISVLTLRSQTEHSRTDHEYLQTI 289
           HQT++I  +   SQ  H +  H  LQT+
Sbjct: 617 HQTIHIEEVPQTSQQHHQQQHHHQLQTV 644


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,741,936
Number of Sequences: 53049
Number of extensions: 437429
Number of successful extensions: 1146
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)