Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A06f
         (456 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQ01 Cluster: Ferritin isoform 2; n=1; Bombyx mori|Re...   159   2e-38
UniRef50_Q9N2P3 Cluster: Ferritin precursor; n=7; Obtectomera|Re...    61   1e-08
UniRef50_Q8MUW9 Cluster: Ferritin 2; n=3; Cucujiformia|Rep: Ferr...    38   0.10 
UniRef50_Q478R2 Cluster: Putative uncharacterized protein precur...    33   2.2  
UniRef50_Q9AW08 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_A5CB12 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_A0LTH5 Cluster: Rieske (2Fe-2S) domain protein; n=1; Ac...    32   5.1  
UniRef50_A6GIX1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.7  
UniRef50_Q5CRP1 Cluster: Protein with forkhead associated (FHA) ...    32   6.7  

>UniRef50_Q1HQ01 Cluster: Ferritin isoform 2; n=1; Bombyx mori|Rep:
           Ferritin isoform 2 - Bombyx mori (Silk moth)
          Length = 139

 Score =  159 bits (387), Expect = 2e-38
 Identities = 74/74 (100%), Positives = 74/74 (100%)
 Frame = +3

Query: 213 MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALA 392
           MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALA
Sbjct: 1   MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALA 60

Query: 393 SLYLKRSYHYLLSA 434
           SLYLKRSYHYLLSA
Sbjct: 61  SLYLKRSYHYLLSA 74


>UniRef50_Q9N2P3 Cluster: Ferritin precursor; n=7; Obtectomera|Rep:
           Ferritin precursor - Manduca sexta (Tobacco hawkmoth)
           (Tobacco hornworm)
          Length = 232

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
 Frame = +3

Query: 213 MKVYALIVACL-ALGVLAEEDSCYQNVDQGCRR---TLSLPHCSAYYGQFKDNHVVANEL 380
           M      VACL AL      D+CYQ+V   C +   +L+LP+C+A Y ++  +  VA E+
Sbjct: 1   MNPITFFVACLLALCGAVAADTCYQDVSLDCSQVSNSLTLPNCNAVYAEYGHHGNVAKEM 60

Query: 381 KALASLYLKRSYHYLLSA 434
           +A A+L+L+RSY YLLS+
Sbjct: 61  QAYAALHLERSYEYLLSS 78


>UniRef50_Q8MUW9 Cluster: Ferritin 2; n=3; Cucujiformia|Rep:
           Ferritin 2 - Apriona germari
          Length = 224

 Score = 37.9 bits (84), Expect = 0.10
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
 Frame = +3

Query: 213 MKVYALIVACLALGVLAEED----SCYQNVDQGCRRTLSLP---HCSAYYGQFKDNHVVA 371
           MK + + V+  A+ V   ED    SCY ++D  C+ +   P   +CSA YG     + V 
Sbjct: 1   MKAFIVFVSLCAVAVAQVEDHLSKSCYNDIDTICKHSKLSPKDSYCSAKYGGI---NKVQ 57

Query: 372 NELKALASLYLKRSYHYLLSA 434
             L+   + +   S+HYLL A
Sbjct: 58  EGLQKFVNDHFTLSFHYLLMA 78


>UniRef50_Q478R2 Cluster: Putative uncharacterized protein
           precursor; n=1; Dechloromonas aromatica RCB|Rep:
           Putative uncharacterized protein precursor -
           Dechloromonas aromatica (strain RCB)
          Length = 196

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +3

Query: 234 VACLALGVLAEED-SCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLKR 410
           +A  A  ++AE+  + Y +  +   R L +P  SA    F DN  V  EL+A  +LY   
Sbjct: 17  IASAAARLMAEDGITDYHHAKKKAARQLGVPEHSA----FPDNAEVEAELRAYRTLYQGE 72

Query: 411 SYHYLLSALLHT 446
            +  L++AL HT
Sbjct: 73  DHVELIAALRHT 84


>UniRef50_Q9AW08 Cluster: Putative uncharacterized protein; n=1;
           Guillardia theta|Rep: Putative uncharacterized protein -
           Guillardia theta (Cryptomonas phi)
          Length = 729

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
 Frame = -3

Query: 217 FIFDAIYLVANSRKNNKCV*RMSKVLPLHTLAQKATSNNDSSR*KRPHKDNRL----*FI 50
           F++++ +L   S  NN  + R+SKV+ L+ L +KAT+NN ++  K   + N+      FI
Sbjct: 268 FLYNSFFLNFFSNINNYQL-RISKVIKLNNLIKKATANNYTNSQKLYFRQNKKIFNENFI 326

Query: 49  LIFYQRYD 26
             F+Q Y+
Sbjct: 327 YSFFQLYN 334


>UniRef50_A5CB12 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 711

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 273 SCYQNVDQGCR-RTLSLPHCSAYYGQFKDNHVVANELKALASLYLKRSYHYLLS 431
           S Y +    CR +  S P C  YY QF D H V++  + L  +Y +RS    LS
Sbjct: 487 SFYSSTKWSCRTQKSSSPRCGTYYLQFSDLHPVSSRFQ-LGIVYTRRSRPQSLS 539


>UniRef50_A0LTH5 Cluster: Rieske (2Fe-2S) domain protein; n=1;
           Acidothermus cellulolyticus 11B|Rep: Rieske (2Fe-2S)
           domain protein - Acidothermus cellulolyticus (strain
           ATCC 43068 / 11B)
          Length = 330

 Score = 32.3 bits (70), Expect = 5.1
 Identities = 20/53 (37%), Positives = 30/53 (56%)
 Frame = +2

Query: 278 LSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGS 436
           + E RP  + D +   ++RV+RP    PR ++R E I   V  +FL LS VG+
Sbjct: 6   IHENRPTPREDIRPRVIERVIRPQDADPRRAKRAERI---VALSFL-LSAVGT 54


>UniRef50_A6GIX1 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 270

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 266 GRLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSER 376
           GR+++S R   M  D + AAL+R+L  +  Q RC E+
Sbjct: 111 GRVLVSIRFTEMPVDIEGAALERLLAFLDAQLRCFEQ 147


>UniRef50_Q5CRP1 Cluster: Protein with forkhead associated (FHA)
           domain within N-terminal region and possible central
           coiled coil domain; n=2; Cryptosporidium|Rep: Protein
           with forkhead associated (FHA) domain within N-terminal
           region and possible central coiled coil domain -
           Cryptosporidium parvum Iowa II
          Length = 770

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +2

Query: 272 LMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGISLTVFE 406
           L   ER+ R+ T  +  A +  +R  +G+PR S+R E   +T FE
Sbjct: 208 LRSQERKGRLSTKDEGKADEHAIRRSRGRPRASDRPEVDEITSFE 252


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,069,863
Number of Sequences: 1657284
Number of extensions: 8436271
Number of successful extensions: 20781
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20778
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)