BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS307A06f (456 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY119190-1|AAM51050.1| 449|Drosophila melanogaster SD11486p pro... 31 0.97 AE014296-1406|AAF50459.2| 449|Drosophila melanogaster CG7213-PA... 31 0.97 EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot... 28 6.8 AE014296-2674|AAS64988.1| 207|Drosophila melanogaster CG13067-P... 28 6.8 AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-P... 27 9.1 AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-P... 27 9.1 >AY119190-1|AAM51050.1| 449|Drosophila melanogaster SD11486p protein. Length = 449 Score = 30.7 bits (66), Expect = 0.97 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 51 INYNLLSLCGRFHLDESLLEVAFCASVCKGSTFDIRQTHLLF 176 +N L+L + L ++ +V +SVC G T+DI+ + L F Sbjct: 114 VNVKCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTF 155 >AE014296-1406|AAF50459.2| 449|Drosophila melanogaster CG7213-PA protein. Length = 449 Score = 30.7 bits (66), Expect = 0.97 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = +3 Query: 51 INYNLLSLCGRFHLDESLLEVAFCASVCKGSTFDIRQTHLLF 176 +N L+L + L ++ +V +SVC G T+DI+ + L F Sbjct: 114 VNVKCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTF 155 >EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire protein. Length = 1349 Score = 27.9 bits (59), Expect = 6.8 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -3 Query: 166 CV*RMSKVLPLHTLAQKATSNNDSSR 89 CV R S+++P HTL+ K D +R Sbjct: 14 CVLRRSRLMPTHTLSSKTVPGLDETR 39 >AE014296-2674|AAS64988.1| 207|Drosophila melanogaster CG13067-PB, isoform B protein. Length = 207 Score = 27.9 bits (59), Expect = 6.8 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +1 Query: 238 PVWLWVCWPRKTHAIR 285 P+W W+C P TH +R Sbjct: 115 PIWEWMCIPMATHHLR 130 >AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-PA, isoform A protein. Length = 1350 Score = 27.5 bits (58), Expect = 9.1 Identities = 19/73 (26%), Positives = 31/73 (42%) Frame = +2 Query: 209 KYEGVCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGI 388 K EG C C+ GSG G G+ L+ +P T + L + +P+ + + Sbjct: 301 KAEGYC---CVCGSGFYGNGKSCLANDQPIRVTGTLTGELNK--QPVSEEAKLQSYVVTS 355 Query: 389 SLTVFETFLPLSP 427 + T PL+P Sbjct: 356 EGRTYTTINPLTP 368 >AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-PB, isoform B protein. Length = 1370 Score = 27.5 bits (58), Expect = 9.1 Identities = 19/73 (26%), Positives = 31/73 (42%) Frame = +2 Query: 209 KYEGVCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEGI 388 K EG C C+ GSG G G+ L+ +P T + L + +P+ + + Sbjct: 301 KAEGYC---CVCGSGFYGNGKSCLANDQPIRVTGTLTGELNK--QPVSEEAKLQSYVVTS 355 Query: 389 SLTVFETFLPLSP 427 + T PL+P Sbjct: 356 EGRTYTTINPLTP 368 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,757,434 Number of Sequences: 53049 Number of extensions: 411040 Number of successful extensions: 1016 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 973 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1016 length of database: 24,988,368 effective HSP length: 79 effective length of database: 20,797,497 effective search space used: 1497419784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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