Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A04f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000150A983 Cluster: Protein kinase domain containing...    33   3.0  
UniRef50_Q4SM47 Cluster: Chromosome 13 SCAF14555, whole genome s...    33   4.0  
UniRef50_Q185R6 Cluster: Putative membrane protein precursor; n=...    32   9.2  

>UniRef50_UPI000150A983 Cluster: Protein kinase domain containing
            protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
            kinase domain containing protein - Tetrahymena
            thermophila SB210
          Length = 1695

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 8    KLFLAYKIQYIMTKTI*ISTQHQHVLFYYSIYLNFILHIRYI*KNRFKRKLG 163
            KL +      I    I I  Q   VL +Y+IY NFIL++ Y+  N  +  LG
Sbjct: 1626 KLCMILNTMEIFALIIVIPLQIPQVLLHYAIYQNFILNLAYLFSNLIQGYLG 1677


>UniRef50_Q4SM47 Cluster: Chromosome 13 SCAF14555, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF14555, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 687

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +1

Query: 343 LIYFLHPAEYSRIERLFRQTLPQTTSH 423
           LI     AEY+RIE LF++T+P +T H
Sbjct: 510 LIQLSKSAEYNRIETLFKRTMPNSTIH 536


>UniRef50_Q185R6 Cluster: Putative membrane protein precursor; n=2;
           Clostridium difficile|Rep: Putative membrane protein
           precursor - Clostridium difficile (strain 630)
          Length = 374

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 270 FKKKKLFSLQYKNLLTNA-SISHYISYLFFTSRRIFSNRAPLQTDIATNH 416
           F KKK  ++  KN + N  SI   + +LF     I  NR PL+T +  N+
Sbjct: 81  FNKKKKLNIYLKNSILNILSIVSIVYFLFVVLWGINYNRIPLETTLINNY 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,247,727
Number of Sequences: 1657284
Number of extensions: 8097733
Number of successful extensions: 17126
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17105
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)