Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   1.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.6  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 294 LQYKNLLTNASISHYISYLFFTSRRIF 374
           + Y+N  T + I  ++ Y+F TS  +F
Sbjct: 123 INYENQRTRSRIHLFVRYVFVTSYLLF 149


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 71  HQHVLFYYSIYLNFILHI 124
           H H LF+  I +N I+H+
Sbjct: 670 HCHFLFHIVIGMNLIIHV 687


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 286 FFRCNTKTF*LTLQLVIIFLIYFLHPAEYSRI 381
           FF  N +T       VI FLI  +  A Y ++
Sbjct: 311 FFELNRRTILGVSNAVITFLIVMVQKASYEKL 342


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 411 NHVTHKHALILMVLV 455
           N V  KH ++LMVLV
Sbjct: 50  NSVVQKHLILLMVLV 64


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 80  VLFYYSIYLNFILH 121
           +L + S +LNF+LH
Sbjct: 142 ILLWISFFLNFMLH 155


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +3

Query: 216  CWYHVKV 236
            CWYH++V
Sbjct: 1558 CWYHLRV 1564


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,190
Number of Sequences: 336
Number of extensions: 2434
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)