Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS307A02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 200 4e-52
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 200 4e-52
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 200 4e-52
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 200 4e-52
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 200 4e-52
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 200 4e-52
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 200 4e-52
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 200 4e-52
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 200 4e-52
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 194 2e-50
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 193 7e-50
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 115 2e-26
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 5e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 75 3e-14
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 71 5e-13
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 5e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.38
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.38
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.38
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.7
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 4.7
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.7
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 4.7
AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical... 27 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 239 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 298
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 299 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 269 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 328
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 329 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 200 bits (489), Expect = 4e-52
Identities = 93/94 (98%), Positives = 94/94 (100%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 342
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 343 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 194 bits (474), Expect = 2e-50
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWI
Sbjct: 283 IMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWI 341
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 193 bits (470), Expect = 7e-50
Identities = 90/94 (95%), Positives = 92/94 (97%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWI
Sbjct: 282 IMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWI 341
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 115 bits (276), Expect = 2e-26
Identities = 50/94 (53%), Positives = 70/94 (74%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
IMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WI
Sbjct: 281 IMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWI 340
Query: 339 GGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 238
GGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 341 GGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 5e-24
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -3
Query: 507 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 337
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 336 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 241
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 83.0 bits (196), Expect = 1e-16
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 13/98 (13%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKII 373
I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A KI+I
Sbjct: 286 IQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIE 345
Query: 372 APPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 265
APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 346 APPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 74.9 bits (176), Expect = 3e-14
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 16/104 (15%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTM 388
I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+ P +
Sbjct: 311 IQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPI 370
Query: 387 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 256
+++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 371 DVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 70.9 bits (166), Expect = 5e-13
Identities = 29/80 (36%), Positives = 54/80 (67%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++
Sbjct: 460 ILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYL 519
Query: 339 GGSILASLSTFQQMWISKQE 280
G I+AS STF+ IS Q+
Sbjct: 520 GAQIVASASTFEDSCISLQQ 539
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 355
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 354 ----YSVWIGGSILASL-STFQQMWISKQEY 277
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYS 349
I +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 297 ICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--H 354
Query: 348 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 232
W G L L+ + WI+++++DE G S+ F T
Sbjct: 355 SWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = -3
Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYS 349
I +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 297 ICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--H 354
Query: 348 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 232
W G L L+ + WI+++++DE G S+ F T
Sbjct: 355 SWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 343 PYGVLPLWRSNDLNLHCRWGESCD 414
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 343 PYGVLPLWRSNDLNLHCRWGESCD 414
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 343 PYGVLPLWRSNDLNLHCRWGESCD 414
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 179 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 271
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 282 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 181
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 179 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 271
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 363 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 202
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical
protein Y38E10A.22 protein.
Length = 305
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 317 REARIDPPIHTEYF--LSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKS 490
++A D P+ T Y L A + I+ + IS +RS +P Y+ N + A +
Sbjct: 26 QQAIADSPLFTAYMKLLKRQAELSPRILSALLSAISSIVRSHLPAYLKFQAKNGLTATEK 85
Query: 491 LRMST 505
L ST
Sbjct: 86 LIQST 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,516,776
Number of Sequences: 27780
Number of extensions: 227640
Number of successful extensions: 725
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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