Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS307A02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             161   3e-42
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   7.7  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  161 bits (392), Expect = 3e-42
 Identities = 76/77 (98%), Positives = 77/77 (100%)
 Frame = -3

Query: 519 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
           IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWI
Sbjct: 57  IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWI 116

Query: 339 GGSILASLSTFQQMWIS 289
           GGSILASLSTFQQMWIS
Sbjct: 117 GGSILASLSTFQQMWIS 133


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 501 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 340
           DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +WI
Sbjct: 349 DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--IWI 398


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 472 RIVRWYHHVPWNRRPYAK 419
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 472 RIVRWYHHVPWNRRPYAK 419
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 309 FQQMWISKQEYDESGPSIVHRK 244
           F+Q W S Q Y +    +V R+
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,288
Number of Sequences: 438
Number of extensions: 3011
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)