Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H12f
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.1  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 437 YVLSKCKQISFGQTFFG*LFSIDLIV 360
           YV   CK+I F +  F  L S+D ++
Sbjct: 62  YVRIYCKEIRFFEISFEILGSLDSLI 87


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 117 YTINLYHTTYIYGWL 73
           YT NL++  + + WL
Sbjct: 317 YTFNLFYLCFCFYWL 331


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 117 YTINLYHTTYIYGWL 73
           YT NL++  + + WL
Sbjct: 273 YTFNLFYLCFCFYWL 287


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 340 SQQLTRATIKSIENSYPKNVWPKLICLH 423
           ++QLT+ T+K+        V  K+  LH
Sbjct: 199 NKQLTKITVKNFATKTQSAVLGKICTLH 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,961
Number of Sequences: 336
Number of extensions: 2798
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)