Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306H11f
(498 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42620.1 68418.m05188 expressed protein 37 0.007
At4g18810.1 68417.m02777 expressed protein similar to UV-B and o... 33 0.14
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 33 0.14
At1g16160.1 68414.m01936 protein kinase family protein contains ... 31 0.57
At1g16120.1 68414.m01932 wall-associated kinase, putative contai... 29 1.3
At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /... 29 1.7
At3g15353.1 68416.m01944 metallothionein protein, putative 28 3.0
At2g22500.1 68415.m02669 mitochondrial substrate carrier family ... 28 3.0
At1g17910.1 68414.m02217 wall-associated kinase, putative contai... 28 3.0
At4g35670.1 68417.m05064 glycoside hydrolase family 28 protein /... 28 4.0
At3g17570.1 68416.m02243 F-box family protein contains Pfam PF00... 28 4.0
At1g21230.1 68414.m02653 wall-associated kinase, putative simila... 28 4.0
At1g17210.1 68414.m02097 expressed protein distantly related to ... 28 4.0
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ... 27 5.3
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 27 7.0
At4g00180.1 68417.m00019 axial regulator YABBY3 (YABBY3) identic... 27 7.0
At3g07250.1 68416.m00863 nuclear transport factor 2 (NTF2) famil... 27 7.0
At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N domain-... 27 7.0
At1g06930.1 68414.m00737 expressed protein ; expression supporte... 27 7.0
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ... 27 9.3
At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family... 27 9.3
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 27 9.3
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 27 9.3
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 27 9.3
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 27 9.3
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 37.1 bits (82), Expect = 0.007
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +3
Query: 258 SESC--QCENGGSCSTESTNCICPPGYTGSYCETRIASYLMSPPPPVNPCSLH--PCRNG 425
+ SC C G C+T+ CIC G+TG C T I CSLH C N
Sbjct: 631 NRSCPNNCNGHGKCTTQGV-CICENGFTGIDCSTAICD---------EQCSLHGGVCDN- 679
Query: 426 GTCKPDRNSWMNHTCDXPLGYATS 497
G C+ + + +TC TS
Sbjct: 680 GVCEFRCSDYAGYTCQNSSKLVTS 703
>At4g18810.1 68417.m02777 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 596
Score = 32.7 bits (71), Expect = 0.14
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 81 VGGVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQECNTYDRGD 248
+GGV +S +V+ AG +GG +G K +V +N +S+++ N E D
Sbjct: 276 MGGVSESNFIVDLTAGENGGPTGIFKGIVSTTNNGGF-TSVRTKNFPEAENVSAYD 330
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 32.7 bits (71), Expect = 0.14
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 162 VVLNSNAVDINS-SIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNCICPPGYTG 338
V+ N +NS S K++ + +TY+ I+ SC C N T+ NC C GY G
Sbjct: 273 VIQTKNLSFVNSLSCKNTKEYDNSTYN---IKLVTSCICNNVTISGTDYANCGCSQGYEG 329
Query: 339 S 341
+
Sbjct: 330 N 330
>At1g16160.1 68414.m01936 protein kinase family protein contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 711
Score = 30.7 bits (66), Expect = 0.57
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 231 TYDRGDIQASESCQCENGGSCSTESTNCICPPGYTGS 341
TY G + +SC CE G NC C G+TG+
Sbjct: 254 TYS-GSYLSGDSCLCEYGYFSEMSYRNCYCSLGFTGN 289
>At1g16120.1 68414.m01932 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 730
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +3
Query: 162 VVLNSNAVDINSSIKSSNIQECNTYDR-GDIQASESCQCENGGSCSTESTNCICPPGYTG 338
VVL S+ + ++ C R G + ++C CE NC C GYTG
Sbjct: 246 VVLELGWYFATSNSRFKSLLGCTNMSRKGSGFSDDNCSCEYDYFSGMSYRNCYCDYGYTG 305
Query: 339 S 341
+
Sbjct: 306 N 306
>At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains Pfam profile PF00295: Polygalacturonase
(pectinase)
Length = 486
Score = 29.1 bits (62), Expect = 1.7
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 171 NSNAVDINSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNCICPPGY 332
N++ +DI S+NI+ N+ IQ + C NGGS T+ C PG+
Sbjct: 157 NTDGIDI---AHSNNIRIFNS----SIQTGDDCIAINGGSYDINITHVACGPGH 203
>At3g15353.1 68416.m01944 metallothionein protein, putative
Length = 69
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 219 QECNTYDRGDIQASESCQCENGGSCSTESTNCICPP 326
+E D G + + +C+C+ G SCS NC C P
Sbjct: 35 KEAMIMDVGAEENNANCKCKCGSSCS--CVNCTCCP 68
>At2g22500.1 68415.m02669 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 313
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 148 PLKPPLTPALGFTTTVESSTPPTNIGV 68
P++ L PAL F T+ + PP +GV
Sbjct: 38 PIQTNLRPALAFQTSTTVNAPPLRVGV 64
>At1g17910.1 68414.m02217 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 764
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 192 NSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNCICPPGYTGS 341
+S ++S + Q D+G + + C C+N + +C C GY G+
Sbjct: 284 HSFLQSLDCQNRGELDKGK-KRTRQCTCDNHIASGMGYASCACASGYKGN 332
>At4g35670.1 68417.m05064 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase PG1 [Vitis vinifera] GI:15081600;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 394
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 171 NSNAVDINSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNCICPPGY 332
N++ +DI+ S +NI N +D IQ + C N GS + T C PG+
Sbjct: 193 NTDGIDISDS---TNI---NIFD-STIQTGDDCIAINSGSSNINITGINCGPGH 239
>At3g17570.1 68416.m02243 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
protein interaction domain
Length = 381
Score = 27.9 bits (59), Expect = 4.0
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +3
Query: 168 LNSNAVDINSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNCICPPGYTGSYC 347
L+ N I+SS++ + + + D D++ S+ +C C+T+ + + YTG
Sbjct: 64 LSVNLSGIHSSVEMTGMLN-SLKDSEDVKISDITECNGLLLCTTDDSRLVVWNPYTG--- 119
Query: 348 ETRIASYLMSPP 383
ETR Y + P
Sbjct: 120 ETRWIPYKSNSP 131
>At1g21230.1 68414.m02653 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 733
Score = 27.9 bits (59), Expect = 4.0
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 96 DSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQECN-TYDRGDIQASESCQ 272
DST N GF G + L+ DIN ++ I C+ T + S CQ
Sbjct: 252 DSTRGKGYNCKCLQGFDG---NPYLSDGCQDINEC--TTRIHNCSDTSTCENTLGSFHCQ 306
Query: 273 CENGGSCSTESTNCICPP 326
C +G +T + +CI P
Sbjct: 307 CPSGSDLNTTTMSCIDTP 324
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 162 VVLNSNAVDINSSIKSSNIQECNTYDRGDI 251
V++N+ +VD + +++ C T+DRGD+
Sbjct: 60 VLVNAGSVDWTGHGLALSVRSCRTWDRGDL 89
>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 793
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Frame = +3
Query: 273 CENGGSCSTESTNCICPPGYTGSYCETRI---ASYLMSPPPP-----VNPCSLH 410
C G C+ E C C G+TG C ++ +Y +P P V+ CS H
Sbjct: 125 CSGQGVCNHEFGLCRCFHGFTGEDCSQKLRLDCNYEKTPEMPYGKWVVSICSRH 178
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 390 VNPCSLHPCRNGGTCKPDRNSWMNHTCDXPLGYAT 494
VN CS H GG C+ D+ W C P +T
Sbjct: 278 VNQCSGHGKCRGGFCQCDK-GWFGTDCSIPSTLST 311
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 324 PGYTGSYCETRIASYLMSPPPPVNP 398
PGY GS + A+ PPPP +P
Sbjct: 248 PGYYGSSSASTTAAATKPPPPPPSP 272
>At4g00180.1 68417.m00019 axial regulator YABBY3 (YABBY3) identical
to YABBY3 [Arabidopsis thaliana] GI:4928753
Length = 240
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 363 SYLMSPPPPVNPCSLHPCRNGGTCKPDRNSWMNH 464
S+L PPPP P L R+GG + N M+H
Sbjct: 81 SFLPPPPPPPPPNLLEEMRSGGQ-NINMNMMMSH 113
>At3g07250.1 68416.m00863 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF00076: RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain), PF02136: Nuclear
transport factor 2 (NTF2) domain
Length = 1294
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 79 NIGVSNRRLSAGLSKRLSKPSCR 11
N+ V ++LSAG KR ++P+CR
Sbjct: 811 NVNVQ-KKLSAGAGKRYTRPTCR 832
>At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 646
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 195 SSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTES 305
+SI + D D+ ES N GSCS ES
Sbjct: 61 ASISPLQYSRFRSIDEADVNGIESDSVSNNGSCSGES 97
>At1g06930.1 68414.m00737 expressed protein ; expression supported
by MPSS
Length = 169
Score = 27.1 bits (57), Expect = 7.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 172 FNTTSLMH-PLKPPLTPALGFTTTVESSTPPTNIGVSNRRLSAGLSKRLSKPS 17
FN+ S + P+ PLTP + SST + +N S+ LSK S PS
Sbjct: 55 FNSDSDFNFPVSAPLTPPPSYFYASPSSTKHVSPKKTNTLFSSLLSKNRSVPS 107
>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 791
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 390 VNPCSLHPCRNGGTCKPDRNSWMNHTCDXPLGYAT 494
VN CS H GG C+ D+ W C P +T
Sbjct: 276 VNQCSGHGKCRGGFCQCDK-GWFGTDCSIPSTLST 309
>At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family
protein
Length = 571
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 142 KPPLTPALGFTTTVESSTPPTNIGVSNRRLSAGLSKRLSKPS 17
K P TPA+ +T V ++TPP R +S L+ R K S
Sbjct: 336 KFPSTPAIIDSTPVITATPPEFASTPARLMSTSLAARPLKRS 377
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 87 GVDDSTVVVNPNAGVSGGFSGCIKDVVLNSNAVDINSSIKSSNIQECNTYDR 242
G ++S ++ ++GV FS + + +LN N D + + + E NT+ R
Sbjct: 23 GYEESLHLLEQDSGVFFDFS-YLSNAILNGNWKDADDYLSAFTSPEANTFSR 73
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 186 DINSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNCICPP-GYTGS 341
D + S ++ + N + G ++ SC CE G +NC C GY G+
Sbjct: 211 DTSDSRLTNPVGCVNLTETGIYTSAPSCVCEYGNFSGFGYSNCYCNQIGYRGN 263
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 186 DINSSIKSSNIQECNTYDRGDIQASESCQCENGGSCSTESTNCICPP-GYTGS 341
D + S ++ + N + G ++ SC CE G +NC C GY G+
Sbjct: 248 DTSDSRLTNPVGCVNLTETGIYTSAPSCVCEYGNFSGFGYSNCYCNQIGYRGN 300
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 321 PPGYTGSYCETRIASYLMSPPPPVNPCSLHP 413
PP T SY SY SPPPP +P S P
Sbjct: 697 PPQATPSYEPPPEYSYSSSPPPP-SPTSYFP 726
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,223,387
Number of Sequences: 28952
Number of extensions: 244029
Number of successful extensions: 908
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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