Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    25   0.31 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          25   0.31 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 204 IFNAYLNENQNISFKV 251
           +FN Y++ENQ + FK+
Sbjct: 16  VFNNYMDENQALGFKI 31


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 204 IFNAYLNENQNISFKV 251
           +FN Y++ENQ + FK+
Sbjct: 36  VFNNYMDENQALGFKI 51


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/58 (20%), Positives = 28/58 (48%)
 Frame = +2

Query: 233 KYFFQSKNI*M*MYKLLFSEYSLLINSIIVKKKLISKRVVHYFINMQMYIKLFEHIRI 406
           ++ F++  + + +  L+F     L ++   K K +   ++H++  M +  KL  H  I
Sbjct: 126 RHIFRTSVLLIFVMHLMFDTLGGLYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHFLI 183


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/58 (20%), Positives = 28/58 (48%)
 Frame = +2

Query: 233 KYFFQSKNI*M*MYKLLFSEYSLLINSIIVKKKLISKRVVHYFINMQMYIKLFEHIRI 406
           ++ F++  + + +  L+F     L ++   K K +   ++H++  M +  KL  H  I
Sbjct: 126 RHIFRTSVLLIFVMHLMFDTLGGLYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHFLI 183


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 479 LVNYQIFMKNNNHVNWKMFCRHNFKFEYV 393
           ++++   M  + H  W+    HNF  EY+
Sbjct: 825 VLDFMSVMTYDYHGAWERQTGHNFTMEYL 853


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,275
Number of Sequences: 336
Number of extensions: 2387
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)