Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H04f
         (308 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   3.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   3.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   5.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    20   6.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   6.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   6.8  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +1

Query: 46  ELVACKSMNGSSSILLSFFALTAS*FGVQSSVALG 150
           E+ ACK  +  +++LLS    ++S   +   + LG
Sbjct: 406 EITACKFFSIDNALLLSICGASSSYLFIMIQLDLG 440


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 168 FYYIIFFIARLIYVH 212
           FY+IIF +    Y+H
Sbjct: 297 FYFIIFQVFESFYLH 311


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +3

Query: 171 YYIIFFIARLIYV 209
           YY++ F+  ++YV
Sbjct: 100 YYLLLFVINVLYV 112


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 51  RRVQVYERIFKYSV 92
           +R +VYE IFK  V
Sbjct: 80  KRREVYESIFKVEV 93


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 51  RRVQVYERIFKYSV 92
           +R +VYE IFK  V
Sbjct: 240 KRREVYESIFKVEV 253


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 51  RRVQVYERIFKYSV 92
           +R +VYE IFK  V
Sbjct: 240 KRREVYESIFKVEV 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,251
Number of Sequences: 336
Number of extensions: 1218
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)