BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS306H04f (308 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 29 0.98 02_03_0138 - 15629421-15629440,15629521-15629752,15630115-156303... 28 1.3 02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 27 2.3 08_02_0721 + 20401217-20401360,20401689-20401809,20401969-204020... 27 3.0 08_02_0059 - 11778739-11780998,11781744-11781751 27 4.0 08_02_1545 - 27790328-27790358,27790512-27791110,27791428-277916... 26 6.9 06_03_1180 + 28218386-28218649,28218725-28219202,28219309-282196... 26 6.9 08_02_0692 + 20080929-20081484,20081932-20081998,20082141-200824... 25 9.2 01_06_1825 + 40161238-40161427,40162153-40162233,40162751-40163175 25 9.2 >07_03_1573 + 27829967-27830338,27830821-27831510,27831594-27831781, 27832286-27832318,27832364-27832605,27833178-27833320, 27833649-27833825,27834104-27834256,27834639-27834694, 27834998-27835157,27835301-27835348 Length = 753 Score = 28.7 bits (61), Expect = 0.98 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -1 Query: 215 KMNVDQSSDEEDDVIKLNGPYAPRATELWTPNYEAVKAKKLNRI 84 +M+ S DD I L G + T+LW PN A K ++L+ I Sbjct: 111 EMSGGGGSSSSDDQILLFGSFTEAETKLWQPN--ANKTRELSEI 152 >02_03_0138 - 15629421-15629440,15629521-15629752,15630115-15630348, 15630486-15630709,15631225-15631509,15631549-15631690 Length = 378 Score = 28.3 bits (60), Expect = 1.3 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -1 Query: 239 GTGPPLEEKMNVDQSSDEEDDVI 171 GT P E+K NVD ++ + DD++ Sbjct: 307 GTNEPCEDKENVDPNAQQRDDLL 329 >02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661, 7583894-7584437,7584794-7584961,7585019-7585101, 7585190-7585631 Length = 949 Score = 27.5 bits (58), Expect = 2.3 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = -1 Query: 242 LGTGPPLEEKMNVDQSSDEEDDVIKLNGPYAPRATELWTPNYEA 111 L PP +N D ++++D ++ L+G P+ PN A Sbjct: 673 LDPAPPSLRDLNADPPAEDDDHIVHLHGEPLPQPPYFPEPNAAA 716 >08_02_0721 + 20401217-20401360,20401689-20401809,20401969-20402067, 20402790-20402851,20403680-20403797,20404004-20404343, 20404435-20404582,20405043-20405144,20405240-20405359, 20405812-20405895,20405974-20406101,20408314-20408389, 20408556-20408631,20408800-20408876,20408975-20409031, 20409411-20409555,20409634-20409806,20409928-20410054, 20410090-20410192,20410492-20410688,20410946-20411097 Length = 882 Score = 27.1 bits (57), Expect = 3.0 Identities = 11/32 (34%), Positives = 17/32 (53%) Frame = -1 Query: 218 EKMNVDQSSDEEDDVIKLNGPYAPRATELWTP 123 E+ N+++ DEED L P P ++ TP Sbjct: 584 EECNLEEVLDEEDPTRSLKDPKKPNVPDIGTP 615 >08_02_0059 - 11778739-11780998,11781744-11781751 Length = 755 Score = 26.6 bits (56), Expect = 4.0 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -1 Query: 116 EAVKAKKLNRILEDPFIDLH 57 E+ K K+LNRIL F DLH Sbjct: 235 ESAKEKRLNRILSLSFDDLH 254 >08_02_1545 - 27790328-27790358,27790512-27791110,27791428-27791648, 27791852-27792071 Length = 356 Score = 25.8 bits (54), Expect = 6.9 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = -1 Query: 191 DEEDDVIKLNGPYAPRATELWTPNYE 114 D+E++ I+ GPY + +WT E Sbjct: 316 DDEEECIRQQGPYELQVKVVWTAGLE 341 >06_03_1180 + 28218386-28218649,28218725-28219202,28219309-28219697, 28219785-28220426,28220466-28221368 Length = 891 Score = 25.8 bits (54), Expect = 6.9 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = -1 Query: 230 PPLEEKMNVDQSSDEEDDVIKL 165 P L++K +V SSD++DD ++L Sbjct: 303 PKLKKKKSVKPSSDDDDDDVEL 324 >08_02_0692 + 20080929-20081484,20081932-20081998,20082141-20082474, 20082835-20083068,20083158-20083319 Length = 450 Score = 25.4 bits (53), Expect = 9.2 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = -1 Query: 239 GTGPPLEEKMNVDQSSDEEDDVI 171 GT P E+K N+D ++ DD++ Sbjct: 331 GTHEPYEDKENIDPNAQHGDDLL 353 >01_06_1825 + 40161238-40161427,40162153-40162233,40162751-40163175 Length = 231 Score = 25.4 bits (53), Expect = 9.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 194 SDEEDDVIKLNGPYAPRATELWTPNYE 114 SD EDD +NG + P TPNY+ Sbjct: 79 SDCEDDFYSVNGDFTPSRGS--TPNYQ 103 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,221,172 Number of Sequences: 37544 Number of extensions: 126656 Number of successful extensions: 358 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 356 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 358 length of database: 14,793,348 effective HSP length: 71 effective length of database: 12,127,724 effective search space used: 375959444 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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