Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H04f
         (308 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA...    31   0.38 
AE014296-1674|AAF50254.2|  226|Drosophila melanogaster CG32036-P...    28   2.7  
AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p pro...    27   3.6  
AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-P...    27   3.6  

>AE014134-2321|AAF53275.1| 1413|Drosophila melanogaster CG6108-PA
           protein.
          Length = 1413

 Score = 30.7 bits (66), Expect = 0.38
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
 Frame = -1

Query: 245 ELGTGPPLEEKMNVD-----QSSDEEDDVIKLNGPYAPRATELWTPNYEAVKAKKLNRIL 81
           ELG   P E   N D     +SSD+E+D  KL    AP  +     N +  K K L + L
Sbjct: 197 ELGERSPSENASNSDSESEEESSDDEEDTPKLGARPAPLQSIKSVTNVQVYKGKTLEQHL 256

Query: 80  EDPFID 63
           +    D
Sbjct: 257 DSESSD 262


>AE014296-1674|AAF50254.2|  226|Drosophila melanogaster CG32036-PB
           protein.
          Length = 226

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
 Frame = +3

Query: 93  KFLCFDGFVIRCPEFGCSW-----CIGAV*FYYI 179
           KFLC +G +    EF C W     C  A  FY++
Sbjct: 159 KFLCTNGTIFNQKEFACDWWYNVKCEEATHFYHL 192


>AY122240-1|AAM52752.1|  124|Drosophila melanogaster SD02058p
           protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 295 DVVKRRPVNCNTTHYRANWV 236
           D +K RP NC T H  A WV
Sbjct: 2   DQLKLRPCNCLTAHPLAEWV 21


>AE014296-3146|AAO41235.1|  124|Drosophila melanogaster CG33062-PA
           protein.
          Length = 124

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 295 DVVKRRPVNCNTTHYRANWV 236
           D +K RP NC T H  A WV
Sbjct: 2   DQLKLRPCNCLTAHPLAEWV 21


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,248,605
Number of Sequences: 53049
Number of extensions: 224929
Number of successful extensions: 760
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)