Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H03f
         (431 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QII5 Cluster: PIF1 helicase-like protein, putative; n...    40   0.017
UniRef50_UPI0000E20F49 Cluster: PREDICTED: hypothetical protein;...    34   1.5  
UniRef50_A7RYG5 Cluster: Predicted protein; n=1; Nematostella ve...    32   5.9  
UniRef50_A5AVU3 Cluster: Putative uncharacterized protein; n=1; ...    31   7.8  
UniRef50_A7SD07 Cluster: Predicted protein; n=1; Nematostella ve...    31   7.8  

>UniRef50_Q4QII5 Cluster: PIF1 helicase-like protein, putative; n=3;
           Leishmania|Rep: PIF1 helicase-like protein, putative -
           Leishmania major
          Length = 1222

 Score = 40.3 bits (90), Expect = 0.017
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = -2

Query: 373 IHNCLSLSSAVISLGTSPFCRLVPPLPECRNVQL 272
           +H+C++LSS   S GTSP    +PPLP+ R V L
Sbjct: 50  VHSCMTLSSTATSPGTSPVVAALPPLPQQRRVLL 83


>UniRef50_UPI0000E20F49 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 224

 Score = 33.9 bits (74), Expect = 1.5
 Identities = 21/40 (52%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -1

Query: 347 RCYLSRNEPVLP-ACPATSGVS*CPTCTCLL-SPWIFTQD 234
           RC LSR+ P L  AC A S V  CP CT L  S W F  D
Sbjct: 31  RCLLSRSGPWLTLACGALSSVL-CPVCTVLAQSSWCFQAD 69


>UniRef50_A7RYG5 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 2534

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = -3

Query: 378  VKSITVYLFHPLLSLSERARSAGLSRHFRSVVMSNLYLSAFALDFYSRFFLKVSPCV--- 208
            ++S+  YL    +  S    + G+  +FR  V SN+ L  F   F+S FFL +S CV   
Sbjct: 2431 LRSVRFYLVFRGVGSSASPDTTGVV-YFRQDV-SNIDLFVFFSVFFSVFFLVLSICVITW 2488

Query: 207  NLKNFRDINNFKQIQ 163
             +K F D     Q+Q
Sbjct: 2489 KMKQFHDRRRIAQVQ 2503


>UniRef50_A5AVU3 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 433

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -3

Query: 333 SERARSAGLSRHFRSVVMSNLYLS-AFALDFYSRFFLKVSPCVNLKNFRDINNFKQ 169
           S +ARS      F   +MS  Y S       YS FFL VS  V L  FR+   +KQ
Sbjct: 361 SRQARSLAEDAFFHPSIMSVSYYSFEHCFAVYSPFFLPVSMHVLLAAFREWRRYKQ 416


>UniRef50_A7SD07 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 338

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = -1

Query: 317 LPACPATSGVS*CPTCTCLLSPWIFTQDFS*KFLLALI*RISGISTISNKFKHAWRM 147
           LPAC     V+ C  C+CLL  W  ++D     LL ++   SG     N+F +AWRM
Sbjct: 238 LPACIFIFIVNLCDECSCLLIHW--SRDL---LLLLVLMNCSG-----NQFLYAWRM 284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,844,841
Number of Sequences: 1657284
Number of extensions: 7768096
Number of successful extensions: 20000
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19993
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)