Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H03f
         (431 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   4.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   4.6  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   4.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   6.1  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   6.1  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   6.1  
AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450 pr...    22   8.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 222  LSRKILSKNPRRKQTSTSWTLRHSGSGGTS 311
            L+  +L++  R+KQ + S    + GSGG S
Sbjct: 1485 LNSPLLNRRQRKKQHTESSDDENGGSGGGS 1514


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -2

Query: 361 LSLSSAVISLGTSPFCRLVPPLPECRNVQLVLVCFRLGFLLK 236
           L   +  + LG  PF  +  P PE   V+      R  F LK
Sbjct: 108 LMTKATSLPLGVPPFRPIPKPTPEAEPVRFDPSVLRRNFALK 149


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -2

Query: 361 LSLSSAVISLGTSPFCRLVPPLPECRNVQLVLVCFRLGFLLK 236
           L   +  + LG  PF  +  P PE   V+      R  F LK
Sbjct: 113 LMTKATSLPLGVPPFRPIPKPTPEAEPVRFDPSVLRRNFALK 154


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 209 TQGETFKKNLE*KSKAKADKYKLDITTLRKWRDK-PAERARS 331
           +Q E    N   ++K +AD+Y L   T  +WR + PA  A S
Sbjct: 53  SQQEKCPLNKYCENKIQADQYNLVPLTCIRWRSQNPASPAGS 94


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 378 VKSITVYLFHPLLS 337
           +K ++VY+ HPLLS
Sbjct: 580 IKLVSVYVRHPLLS 593


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 6/30 (20%), Positives = 14/30 (46%)
 Frame = -2

Query: 187 YQQFQTNSNMHGACAPCQYFSIFELMHLDW 98
           Y++ +  +    +C P +Y      +H +W
Sbjct: 155 YERMKQRARSEESCVPLEYLKELHELHENW 184


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 6/30 (20%), Positives = 14/30 (46%)
 Frame = -2

Query: 187 YQQFQTNSNMHGACAPCQYFSIFELMHLDW 98
           Y++ +  +    +C P +Y      +H +W
Sbjct: 156 YERMKQRARSEESCVPLEYLKELHELHENW 185


>AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 73  KFAEFRFKTNLNALIQRY 126
           KFA++  K+ L  L+QR+
Sbjct: 132 KFAQYELKSTLVKLLQRF 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,346
Number of Sequences: 2352
Number of extensions: 9116
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)