Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...   136   9e-33
U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical p...    61   4e-10
U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical p...    61   4e-10
U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical pr...    52   3e-07
U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z47069-2|CAA87337.1|  313|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U55364-2|AAN84822.2|  317|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score =  136 bits (329), Expect = 9e-33
 Identities = 57/116 (49%), Positives = 84/116 (72%)
 Frame = +3

Query: 150 CLEQVADLIEKYKKKGNPVAGIVVEPIQSEGGDNEASPEFFRDLQKLSKEKAVAFIVDEV 329
           CL  V   I ++K++ N VA I+VEPIQ+EGGD+  SP FF+ L+ ++ +  + FIVDEV
Sbjct: 253 CLADVEAKISEWKRRDNDVAAIIVEPIQAEGGDHYGSPAFFQGLRDITSKHGIVFIVDEV 312

Query: 330 QTGCGPTGKMWCYEHFDLPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRVFNTWDG 497
           QTG G TG +W ++H++L + PD+VTFSKK+LTGG+++    +   AYR++NTW G
Sbjct: 313 QTGGGATGDIWAHDHWNLSSPPDMVTFSKKLLTGGYFYGEHLRVKEAYRIYNTWMG 368


>U41534-13|AAD31050.2|  422|Caenorhabditis elegans Hypothetical
           protein C16A3.10a protein.
          Length = 422

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 34/83 (40%), Positives = 47/83 (56%)
 Frame = +3

Query: 192 KGNPVAGIVVEPIQSEGGDNEASPEFFRDLQKLSKEKAVAFIVDEVQTGCGPTGKMWCYE 371
           K   VA  +VEPIQ E G     P + + +  L K+  V FI DEVQ+G G +GK+  + 
Sbjct: 201 KDKNVAAFMVEPIQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEVQSGLGRSGKLLAHY 260

Query: 372 HFDLPTSPDVVTFSKKMLTGGFY 440
           H ++   PD+V    K L+GGFY
Sbjct: 261 HDNV--RPDIVVLG-KALSGGFY 280


>U41534-12|AAM22027.1|  357|Caenorhabditis elegans Hypothetical
           protein C16A3.10b protein.
          Length = 357

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 34/83 (40%), Positives = 47/83 (56%)
 Frame = +3

Query: 192 KGNPVAGIVVEPIQSEGGDNEASPEFFRDLQKLSKEKAVAFIVDEVQTGCGPTGKMWCYE 371
           K   VA  +VEPIQ E G     P + + +  L K+  V FI DEVQ+G G +GK+  + 
Sbjct: 136 KDKNVAAFMVEPIQGEAGVVLPDPGYLKGVSDLCKKYNVLFITDEVQSGLGRSGKLLAHY 195

Query: 372 HFDLPTSPDVVTFSKKMLTGGFY 440
           H ++   PD+V    K L+GGFY
Sbjct: 196 HDNV--RPDIVVLG-KALSGGFY 215


>U80931-2|AAB37999.1|  467|Caenorhabditis elegans Hypothetical
           protein T01B11.2a protein.
          Length = 467

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
 Frame = +3

Query: 156 EQVADLIEKYKKKGNPVAGIVVEPIQSEGGDNEASPEFFRDLQKLSKEKAVAFIVDEVQT 335
           + V  ++   + +   VA    E +QS GG      ++F+D+    +      I+DEVQT
Sbjct: 220 DDVKSILNDVESRQCGVAAYFAEALQSCGGQVIPPKDYFKDVATHVRNHGGLMIIDEVQT 279

Query: 336 GCGPTG-KMWCYEHFDLPTSPDVVTFSKKMLTG 431
           G G  G K W ++ +D    PD+VT  K M  G
Sbjct: 280 GFGRIGRKYWAHQLYDDGFLPDIVTMGKPMGNG 312


>U97405-5|AAB53010.3|  444|Caenorhabditis elegans Hypothetical
           protein T09B4.8 protein.
          Length = 444

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = +3

Query: 153 LEQVAD-LIEKYKKKGNPVAGIVVEPIQSEGGDNEASPEFFRDLQKLSKEKAVAFIVDEV 329
           +EQ  D L+  +     P A  ++E IQ  GG  +    + +   +  +++    I DEV
Sbjct: 204 IEQFDDMLLHDFSHSSGPAA-FLIESIQGVGGTVQYPHGYLKKSYESVQKRGGLAIADEV 262

Query: 330 QTGCGPTGK-MWCYEHFDLPTSPDVVTFSKKMLTG 431
           QTG G  G   W +E  D    PD+VT +K +  G
Sbjct: 263 QTGFGRLGSHFWGFESQD--ALPDMVTMAKGIGNG 295


>Z47069-2|CAA87337.1|  313|Caenorhabditis elegans Hypothetical
           protein F36G3.2 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 153 LEQVADLIEKYKKKGNPVAGIVVEPIQSEGGDNEASPE 266
           L  V  +++KY+KK  P  G  +E  + +  +  AS E
Sbjct: 111 LRGVPSMVDKYRKKATPFVGATLENYKMKVAEYHASME 148


>U55364-2|AAN84822.2|  317|Caenorhabditis elegans Hypothetical
           protein F21C10.9 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 153 LEQVADLIEKYKKKGNPVAGIVVEPIQSEGGDNEASPEFFRDLQKLSK 296
           L  V  +  KYK +  PV G ++E  +    D  ++ + F+DL  + K
Sbjct: 110 LRGVVKMAPKYKSRDTPVDGALLENYRLTSNDFYSAMKNFQDLGLIQK 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,010,314
Number of Sequences: 27780
Number of extensions: 243200
Number of successful extensions: 607
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)