Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306H02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.5  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   4.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   4.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 334 VCTSSTINATAFSLDNF 284
           +CT+S +N  A SLD +
Sbjct: 148 MCTASILNLCAISLDRY 164


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 208 LALLWNQFSPKEVIMKLHRNSF 273
           L  LW +  P +V+  LH   F
Sbjct: 188 LVFLWKEGDPVQVVKNLHLPRF 209


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 208 LALLWNQFSPKEVIMKLHRNSF 273
           L  LW +  P +V+  LH   F
Sbjct: 188 LVFLWKEGDPVQVVKNLHLPRF 209


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 73  YSIFDLFFMAPFKKLLSSVCR 135
           YSIF+  F   FK++L+   R
Sbjct: 325 YSIFNTEFREAFKRILTKGAR 345


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +3

Query: 360 WCYEHFDLPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRVFNTWD 494
           +C  H D   +  +V    ++ T     T   K P+ Y+V    D
Sbjct: 423 YCAAHTDSSGAMKIVNMLNQLYTAFDVLTDPKKNPNVYKVETVGD 467


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 347 WTTSGLHFINNKCN 306
           WT +  H IN KC+
Sbjct: 72  WTITSYHRINLKCS 85


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/45 (24%), Positives = 18/45 (40%)
 Frame = +3

Query: 360 WCYEHFDLPTSPDVVTFSKKMLTGGFYFTADFKPPHAYRVFNTWD 494
           +C  H D   +  +V    ++ T     T   K P+ Y+V    D
Sbjct: 423 YCAAHTDSSGAVKIVNMLNQLYTAFDVLTDPKKNPNVYKVETVGD 467


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 194 GQSGCWHC 217
           G+  CWHC
Sbjct: 602 GEQCCWHC 609


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,521
Number of Sequences: 438
Number of extensions: 2853
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)