Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306H01f
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 54 7e-08
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 50 1e-06
05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 48 4e-06
01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 48 4e-06
05_01_0379 + 2975701-2976831 44 5e-05
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 44 5e-05
05_01_0380 + 2978256-2979284 44 7e-05
06_02_0097 + 11710560-11710859,11712605-11713270 43 1e-04
01_01_0147 - 1332752-1333447,1333557-1333739 43 2e-04
05_01_0382 + 2985526-2986659 42 4e-04
02_02_0521 - 11156594-11156956,11157097-11157483,11158327-111583... 36 0.025
01_06_0794 + 32050413-32050523,32050663-32051391 35 0.044
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 34 0.058
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 33 0.10
05_01_0381 + 2981762-2982075,2982302-2982658,2982752-2982800 33 0.13
04_04_1161 + 31374240-31374403,31374495-31374812,31375347-313754... 31 0.54
09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 31 0.72
10_08_0184 - 15570471-15570684,15571085-15571354,15571489-155717... 30 1.3
03_05_1059 - 30020877-30021539,30022367-30022375 30 1.3
06_03_0485 + 21330547-21330684,21331391-21331471,21331610-213316... 29 2.2
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 29 2.9
11_06_0543 + 24792110-24792229,24792316-24792521,24793770-247944... 28 3.8
07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779... 28 3.8
07_01_1074 - 9599465-9599545,9599632-9599690,9600070-9600143,960... 28 5.1
06_01_1014 - 7936514-7936530,7936768-7936859,7937290-7937581,793... 28 5.1
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 28 5.1
09_04_0088 + 14494711-14494931,14496309-14496399,14496496-144965... 27 6.7
07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392 27 6.7
05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 27 6.7
02_01_0393 - 2863335-2864534 27 6.7
02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546,190... 27 6.7
03_02_0275 + 7042433-7042732,7042864-7043140,7043751-7044231,704... 27 8.8
01_01_0138 + 1253256-1253534,1253625-1254359 27 8.8
>02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688
Length = 308
Score = 54.0 bits (124), Expect = 7e-08
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 100 SEIVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFF 276
+ +V ++ L L++LL+CPVC I QC GH +C CK R+ + CP CR
Sbjct: 41 TSLVTVELSSLTGLNDLLECPVCTNSMRPPILQCPNGHTICSNCKHRVENHCPTCRQELG 100
Query: 277 GTRNYAMEELIANVR 321
R A+E++ +++
Sbjct: 101 NIRCLALEKVAESLQ 115
>07_03_1564 +
27749899-27750166,27750431-27750507,27750923-27750950,
27751117-27751261,27751351-27751429,27751515-27751633,
27751732-27752073,27754807-27754896,27755730-27755955,
27756398-27756784,27757176-27757496
Length = 693
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEELIANV 318
LL+CPVC I QC+ GH +C CK R+ + CP CR R A+E++ A++
Sbjct: 442 LLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASL 499
>05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118
Length = 361
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEEL 306
LL+CPVC I QC GH +C CK R+ + CP CR R A+E++
Sbjct: 97 LLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 150
>01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251
Length = 347
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEEL 306
LL+CPVC I QC GH +C CK R+ + CP CR R A+E++
Sbjct: 83 LLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKV 136
>05_01_0379 + 2975701-2976831
Length = 376
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 151 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSV---CPVCRALFFG---TRNYAMEELIA 312
L+C VC+ + IFQC GH VC C+ L+ C VCR G R YA+E L+
Sbjct: 123 LECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYRRCYALERLVD 182
Query: 313 NVR 321
+R
Sbjct: 183 AIR 185
>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
Length = 417
Score = 44.4 bits (100), Expect = 5e-05
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSVCPVCRA-LFFGT---RNYAMEELIAN 315
+L CPVC++I +FQC+ GH VC C+ L C + FGT R AME ++ +
Sbjct: 36 VLHCPVCFQILRPPVFQCDLGHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVNS 95
Query: 316 VRKLRAF 336
V A+
Sbjct: 96 VEVACAY 102
>05_01_0380 + 2978256-2979284
Length = 342
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 151 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSV---CPVCRALFFG---TRNYAMEELIA 312
L+C VC+ IFQC GH VC C+ +L+ C VCR G R YA+E L+
Sbjct: 73 LECGVCFLPLRPPIFQCEVGHVVCSPCRDKLAPAGRCHVCRVAVAGGEYRRCYALERLVD 132
Query: 313 NVR 321
+R
Sbjct: 133 AIR 135
>06_02_0097 + 11710560-11710859,11712605-11713270
Length = 321
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 145 NLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLS-VCPVCRALFFGTRNYAMEELIANVR 321
++L C +C+E ++QC GH C C +LS C +C RN A+E+++ +++
Sbjct: 83 DVLDCSICFESLRPPLYQCQNGHVACFSCWSKLSNKCHICSRDAKFARNIALEKIVESIK 142
>01_01_0147 - 1332752-1333447,1333557-1333739
Length = 292
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 151 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEELIA 312
L+CP+C+ ++ C GH CG C ++ ++CP C R +E+++A
Sbjct: 46 LECPICFVPFEDRVYMCKNGHAACGSCYAKMNTMCPCCIEPIGNIRCRPLEKVLA 100
>05_01_0382 + 2985526-2986659
Length = 377
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 151 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSV---CPVCRALFFG---TRNYAMEELIA 312
L+C VC IFQC GH VC C+ +L+ C VCRA G R +A+E L+
Sbjct: 124 LECGVCCLPLRPPIFQCEVGHVVCAPCRDKLAPAGRCHVCRAAVAGGEYRRCHALERLVD 183
Query: 313 NVR 321
+R
Sbjct: 184 AIR 186
>02_02_0521 -
11156594-11156956,11157097-11157483,11158327-11158383,
11159671-11159970
Length = 368
Score = 35.5 bits (78), Expect = 0.025
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 190 IFQCNEGHNVCGRCKVRL-SVCPVCRALFFGTRNYAMEEL 306
+ +C GH +C CK R+ + CP CR R A+E++
Sbjct: 117 LLECQNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKV 156
>01_06_0794 + 32050413-32050523,32050663-32051391
Length = 279
Score = 34.7 bits (76), Expect = 0.044
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 136 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL---SVCPVCRALFFGTRNYAMEEL 306
DL+ +L C VC + QC GH +C C +L + C VC R +A+E++
Sbjct: 18 DLE-VLDCTVCCHPLKPPVLQCGVGHVICSSCHGKLPDKNRCHVCAMDTAYNRCFAVEQI 76
Query: 307 IANV 318
+ ++
Sbjct: 77 LRSI 80
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 34.3 bits (75), Expect = 0.058
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQC-NEGHNVCGRCKVRL-SVCPVCRA-LFFGTRNYAMEELIA 312
+L+C VC+ T ++QC GH C C + C CRA TR AME +A
Sbjct: 50 VLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRCRAMEHFLA 107
Score = 30.7 bits (66), Expect = 0.72
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQCNEGHNVCGRCK 234
LL C C + +F+C+E H VC C+
Sbjct: 390 LLHCHACLQPLKPPVFKCDEAHIVCSGCR 418
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 33.5 bits (73), Expect = 0.10
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = +1
Query: 127 ELPDLDNL---LQCPVCYEI-------PTGHIFQCNEGHNVCGRCKVRLSVCPVCRALFF 276
ELP +D L L C +C EI P GH F + +C R CP CR L
Sbjct: 151 ELPCMDRLREELSCAICLEICFEPSTTPCGHSFCMKCLKHAAAKCGKR---CPKCRQLIS 207
Query: 277 GTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSS 387
+R+ + ++ N +L F + R +AS S +
Sbjct: 208 NSRSCTVNTVLWNTIQL-LFPSETEARRTSIASSSET 243
>05_01_0381 + 2981762-2982075,2982302-2982658,2982752-2982800
Length = 239
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 151 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLS 246
L+C VC +FQC +GH VC C+ +L+
Sbjct: 66 LECGVCRLPLRPPVFQCEDGHVVCSPCRDKLA 97
>04_04_1161 +
31374240-31374403,31374495-31374812,31375347-31375493,
31375674-31375754,31375799-31375886,31375999-31376176,
31376705-31376794,31376795-31376866,31377247-31377257
Length = 382
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 28 RILLSI-HSG*IDFFINQPTLFYIMSEIVENKVDELPDLDNLLQCP 162
RILL+I H I F+N + Y +EI+++ + ++P+ ++LL+ P
Sbjct: 149 RILLTILHCHPIRAFLNWHLVRYKAAEIIKDLIPQIPEFNDLLKLP 194
>09_04_0107 -
14640097-14640348,14640472-14640701,14640805-14641215,
14641481-14643831,14643927-14644093
Length = 1136
Score = 30.7 bits (66), Expect = 0.72
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 343 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDXQI 459
GGK T + AS SSS+P D+ S++ L E I
Sbjct: 488 GGKKTTAMAASSSSSSPVHDAESEDENSLDHSEKETITI 526
>10_08_0184 -
15570471-15570684,15571085-15571354,15571489-15571711,
15571809-15571875,15571996-15572137,15572226-15572290
Length = 326
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 109 VENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRC 231
VE +V E+ DL+ L+C +C E+ I + H++C RC
Sbjct: 124 VEERVSEV-DLERELECGICLEV-NAKIVLPDCAHSLCMRC 162
>03_05_1059 - 30020877-30021539,30022367-30022375
Length = 223
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 208 GH-NVCGRCKVRLSVCPVCRALFFGTRN 288
GH ++C C R VCP+CR+ T N
Sbjct: 47 GHASLCAECSQRCDVCPICRSPIPDTGN 74
>06_03_0485 +
21330547-21330684,21331391-21331471,21331610-21331683,
21331767-21331842,21332014-21332081,21332803-21332926,
21333264-21333362,21333679-21333815,21334166-21334247,
21334595-21334657,21335272-21335319,21335452-21335514,
21335840-21335923,21336098-21336118
Length = 385
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 223 HIHYDLHCIGKYDL*GF-HNI-LDTE-VSYPSLAIRQPYFLLSPTLC 92
H +YD+ + K G H+I +D E + +P+ R YF+L+PTLC
Sbjct: 173 HTNYDIRMLSKSIEKGVTHDISIDPENIKWPTFK-RLSYFMLAPTLC 218
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 343 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDXQ 456
GG +G + + DS S++ EYL EDE +D +
Sbjct: 186 GGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDE 223
>11_06_0543 +
24792110-24792229,24792316-24792521,24793770-24794462,
24794538-24794717,24794793-24795084,24795166-24795375
Length = 566
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 112 ENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRC 231
E + + D+DN+ P+ + GH +E +V G+C
Sbjct: 238 EAGLKSMDDVDNIEMAPLAAQFKLGHSLTTDEYRHVVGKC 277
>07_03_0265 +
15976331-15976645,15977575-15977784,15977869-15977916,
15978307-15978675,15978736-15978747,15978763-15978870,
15979156-15979493,15980313-15980430,15983247-15984107,
15984457-15984750
Length = 890
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 295 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPAR 399
+EE+ NV RAF LG KV + LLA S A+
Sbjct: 852 LEEVKINVDCTRAFSLGSKVLKKLLALPRVSDKAK 886
>07_01_1074 -
9599465-9599545,9599632-9599690,9600070-9600143,
9600797-9600996,9601074-9601365,9601665-9602411,
9602653-9602696,9602714-9602827,9603590-9603838,
9603922-9603927
Length = 621
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 97 MSEIVEN-KVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRC 231
M + +E +++ L D+ N+ P+ + GH +E N+ G C
Sbjct: 279 MQDFLEGARLNSLFDVRNIANAPLAAQYKLGHSLTTDEYRNIVGNC 324
>06_01_1014 -
7936514-7936530,7936768-7936859,7937290-7937581,
7937690-7937759,7938131-7938223
Length = 187
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 166 CYEIPTGHIFQCNEGHNVCGR--CKVRLSVCPVCRALFFGTR 285
C+ IP GH F C C R + + CP+CR L R
Sbjct: 135 CFFIPCGHGFAC----FTCARRIAEDKNQACPICRRLIHRVR 172
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 370 ASDSSSTPARDSGSDNAEYLGEDENND 450
+S SSS+ A D G DN E +D +ND
Sbjct: 469 SSSSSSSLAMDRGEDNHELPRQDHHND 495
>09_04_0088 +
14494711-14494931,14496309-14496399,14496496-14496571,
14496671-14496755,14497381-14497450,14499111-14499316,
14499434-14499508,14501043-14501133,14501400-14501441,
14501661-14501741,14502010-14502089,14502254-14502365
Length = 409
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +1
Query: 97 MSEIVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSVCPVCR 264
M+++ + + D+L + + +L C +C+E + + +C C + CP+CR
Sbjct: 333 MAKLSQQQCDKLKN-EQIL-CRICFERDICIVLLPCRHYVLCEACSDKCRSCPICR 386
>07_03_0957 + 22877348-22877446,22877903-22877971,22878619-22879392
Length = 313
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 139 LDNLLQCPVCYEIPTGHIFQCNEGH---NVCGRCKVRLSVCPVCRALF 273
++ +QCP + I C + H + R +V + VCP C F
Sbjct: 246 VEQCVQCPARFSTVGALIEHCEKSHQSNSQSSRSRVTVDVCPKCSKAF 293
>05_05_0352 +
24328117-24328303,24328451-24328559,24330634-24330692,
24331139-24331220,24331361-24331481,24331751-24332278,
24332724-24332831,24332934-24333131,24334043-24334234,
24336116-24336199,24336385-24336525,24336683-24336748,
24336880-24337047,24337134-24337463,24337568-24337666
Length = 823
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = +1
Query: 127 ELPDLDNLLQCPVCYEI--PTGHIFQCNEGHNVCGRC---KVRL--SVCPVCR 264
+L D+ +QCP+C I T + +C H C C +RL + CP CR
Sbjct: 104 KLMDIRKEVQCPICLGIIRKTRTVMECL--HRFCRDCIDKSMRLGNNECPACR 154
>02_01_0393 - 2863335-2864534
Length = 399
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 187 HIFQCNEGHNVCGRCKVRLSVCPVCRALFFGTRNY 291
H F C+ HN CG + + P C L F R +
Sbjct: 224 HYFLCSGFHNDCGVNNKLIEMYPKCDLLEFSRRTF 258
>02_01_0284 +
1907249-1907665,1907816-1907859,1909508-1909546,
1909791-1910112,1910803-1910892,1911541-1911609,
1911969-1912074,1912146-1912234,1912349-1912461,
1912555-1912657
Length = 463
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 274 FGTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENN 447
F T Y + + R+F + G +SDS+S+P+ + SD E G+ N
Sbjct: 208 FTTMAYPVSPIAGRRSNWRSFAASLNLEDGPASSDSTSSPSEQT-SDGGEVYGDPSEN 264
>03_02_0275 +
7042433-7042732,7042864-7043140,7043751-7044231,
7044943-7045491,7045556-7045680,7045824-7045966
Length = 624
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 157 CPVCYE-IPTGHIFQCNEGHNVCGRC 231
C VCY+ +P + + GHN C C
Sbjct: 168 CNVCYDDVPLSDASKMDCGHNYCNEC 193
>01_01_0138 + 1253256-1253534,1253625-1254359
Length = 337
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQCNEGHNVCGRC 231
+L CP+C +QC GH C C
Sbjct: 77 VLHCPLCLLPLKPPTYQCAAGHLACSSC 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,684,163
Number of Sequences: 37544
Number of extensions: 243146
Number of successful extensions: 651
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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