Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306H01f
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 57 6e-09
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 57 6e-09
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 37 0.007
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 33 0.091
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 32 0.21
AC024817-27|AAY86296.1| 636|Caenorhabditis elegans Hypothetical... 31 0.37
AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical ... 31 0.48
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 31 0.64
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 29 2.6
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 29 2.6
AF016424-1|AAB65331.2| 617|Caenorhabditis elegans Hypothetical ... 29 2.6
Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 28 3.4
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 28 3.4
AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical ... 28 4.5
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical pr... 27 7.9
U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 57.2 bits (132), Expect = 6e-09
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +1
Query: 124 DELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEE 303
D ++ ++ +CPVC E QC+ GH VC C+ +L CP CR RN +E+
Sbjct: 79 DSSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEK 138
Query: 304 LIANVRKLRAFKLGG 348
+ VR F G
Sbjct: 139 IANTVRFPCKFSTSG 153
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 57.2 bits (132), Expect = 6e-09
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +1
Query: 124 DELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEE 303
D ++ ++ +CPVC E QC+ GH VC C+ +L CP CR RN +E+
Sbjct: 145 DSSAEILSVFECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEK 204
Query: 304 LIANVRKLRAFKLGG 348
+ VR F G
Sbjct: 205 IANTVRFPCKFSTSG 219
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Frame = +1
Query: 130 LPDLDNLLQCPVCYEIPTGHIFQ-CNE--GHNVCGRCKVRLSVCPVCRA--LFFGT-RNY 291
LP++D +CP C E + + C GH++C +C+ ++ CP+C+ FFGT NY
Sbjct: 2 LPNVD-FSRCPTCLEDYDDNSHRPCVGFCGHSICLKCQSKIVSCPLCKRKNAFFGTVINY 60
Query: 292 AMEELIANVRKL 327
+ + +R+L
Sbjct: 61 QLLDSCLAIRQL 72
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.091
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +1
Query: 91 YIMSEI--VENKVDELPDLDNLLQCPVCY-EIPTGHIFQCNEGHNVCGRC----KVRLSV 249
Y++ EI +ENK E D D+ L+C +C +I I C VC C + + +
Sbjct: 245 YLLQEIFGIENKSVETMDDDSGLECIICLSDIRDTVILPCRH-LCVCSNCADSLRYKHNN 303
Query: 250 CPVCRALF 273
CP+CR+ F
Sbjct: 304 CPICRSPF 311
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 32.3 bits (70), Expect = 0.21
Identities = 10/45 (22%), Positives = 25/45 (55%)
Frame = +1
Query: 190 IFQCNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEELIANVRK 324
+ CN H++C +C + + CP+C+ + NY +++ + ++
Sbjct: 51 VSSCN--HSLCSQCFDKFTECPICKEPLVRSENYQARKIVEHFKE 93
>AC024817-27|AAY86296.1| 636|Caenorhabditis elegans Hypothetical
protein Y54G2A.40 protein.
Length = 636
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 199 CNEGHNVCGRCKVRLSVCPVCRALFFGTRNYAMEEL 306
C+ H++C +C + CP+C T NYA ++
Sbjct: 31 CSCQHSLCTQCFNKYKNCPICAKPLVRTENYAARQI 66
>AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical
protein Y32B12A.1 protein.
Length = 177
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 148 LLQCPVCYEIPTGHIFQCN--EGHNVCGRCKVR 240
+++C CY TGH F+C +++C C+ R
Sbjct: 132 IVRCDSCYTTITGHRFKCTICTDYDICSSCEAR 164
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +1
Query: 151 LQCPVCYEIPTGHIFQCNEGHNVCGRCKVR----LSVCPVCR 264
+QC +C+++ + H++C C R SVCP+CR
Sbjct: 24 VQCHICFQVNHEPVTFLTCKHSICAGCAGRWLSSCSVCPMCR 65
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
Frame = +1
Query: 157 CPVCYEIPTGHIFQCNEGHNVCGRCKVRL-----SVCPVCR 264
C VC E+ G I GH C +C + + CP CR
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCR 202
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 145 NLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL 243
++++CP+CY I Q GH +C C RL
Sbjct: 17 HVVECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 145 NLLQCPVCYEIPTGHIFQCNEGHNVCGRCKVRL 243
++++CP+CY I Q GH +C C RL
Sbjct: 17 HVVECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48
>AF016424-1|AAB65331.2| 617|Caenorhabditis elegans Hypothetical
protein F39G3.6 protein.
Length = 617
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 225 ATYIMTFIALENMTCRDFITYWTLK*VIQVWQFVNLIFYYLRHYVK 88
A Y F A E + F+ W+L +Q + V IF+ L+HY K
Sbjct: 130 ADYFREFQA-ERSSLNIFVHLWSLSVEMQFYLLVPFIFFGLQHYKK 174
>Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical
protein T23F6.3 protein.
Length = 291
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Frame = +1
Query: 154 QCPVCYEIPTGHIFQCNEGHNVCGRCKV------RLSV---CPVCRALFFGTRNYAMEEL 306
+C VC+E P CN NV G CK R S CP+CR + T + + E+
Sbjct: 209 ECTVCFETPVDPQ-GCNRCMNVIG-CKTCVQRWHRSSTQPSCPLCRRRWIATPDVSPMEI 266
Query: 307 IANVRK 324
I + R+
Sbjct: 267 IKSRRQ 272
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Frame = +1
Query: 121 VDELPDLDNLLQCPVCYE-------IPTGHIFQCNEGHNVCGRCKVRLSVCPVCRA 267
V+ L ++ LL CP+C + +P H F C C R CP CRA
Sbjct: 31 VNPLEKIEQLLTCPICLDRYKQPKLLPCQHTF-CYPCLESCADTLHRNLKCPECRA 85
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Frame = +1
Query: 121 VDELPDLDNLLQCPVCYE-------IPTGHIFQCNEGHNVCGRCKVRLSVCPVCRA 267
V+ L ++ LL CP+C + +P H F C C R CP CRA
Sbjct: 31 VNPLEKIEQLLTCPICLDRYKQPKLLPCQHTF-CYPCLESCADTLHRNLKCPECRA 85
>AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical
protein F56A6.5 protein.
Length = 191
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +1
Query: 154 QCPVCY-EIPTGHIFQC--NEGHNVCGRCKVRL--SVCPVCR 264
+C +CY E C GH +C RC+++L CP C+
Sbjct: 5 ECSICYDEYDHDTQIPCIGTCGHTICDRCRLQLLNKRCPHCK 46
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 167 VMKSLQVIFSNAMKVIMYVADVKFGFLSARYAEHYFLEPGTMPWKSS 307
++++L + + A Y+ D K +A H F P TMP+ SS
Sbjct: 959 ILETLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPATMPFSSS 1005
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 167 VMKSLQVIFSNAMKVIMYVADVKFGFLSARYAEHYFLEPGTMPWKSS 307
V+ +L + + A Y+ D K +A H F P TMP+ SS
Sbjct: 900 VLMTLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPATMPFSSS 946
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 167 VMKSLQVIFSNAMKVIMYVADVKFGFLSARYAEHYFLEPGTMPWKSS 307
V+ +L + + A Y+ D K +A H F P TMP+ SS
Sbjct: 959 VLMTLSMTANMAGSAAAYLPDYKKAVHAAGLIFHLFTYPATMPFSSS 1005
>Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical
protein C05G5.1 protein.
Length = 456
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 116 IRLTNCQTWITYFSVQYVMKSLQVIFSNAM--KVIMYVADVKFGFLSARYAEHYFL 277
I +N TWITY ++ + + + A+ VI V + GFL+ + + + L
Sbjct: 26 INFSNGNTWITYAAITFYTNNYYSNSNAALFFNVIFMVLSIPVGFLACWWIDKFGL 81
>U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical
protein B0495.8a protein.
Length = 313
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 295 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENN 447
M+E I RK R KLG + RG +S RD G D EY G+ + +
Sbjct: 229 MKETIDERRKEREEKLGSQ--RGYQRRESYGR--RDRGGDRGEYRGDRDRD 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,324,042
Number of Sequences: 27780
Number of extensions: 228161
Number of successful extensions: 633
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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