Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306G10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    29   2.3  
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227...    28   5.2  
10_08_0308 + 16660751-16661450,16661656-16661819,16662615-166628...    27   9.1  
04_01_0572 + 7404842-7405502,7405581-7406143,7406338-7406479,740...    27   9.1  
03_02_0254 + 6862762-6863663,6863994-6864241,6864323-6864465,686...    27   9.1  

>02_05_0484 -
           29401195-29401404,29401572-29401755,29401866-29403973,
           29404320-29404403,29404507-29404777,29404864-29405117,
           29405513-29405722,29406357-29406503
          Length = 1155

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +2

Query: 17  SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTF 196
           S+K   V +K K+   +N         + L   +    +  T +L+K+ DEY + ++S  
Sbjct: 444 SLKATVVAEKEKILQEQN--------NLKLTEEERQEHIMLTAQLKKEIDEYRMRSNSLS 495

Query: 197 KTTEMKFKPGEEFEED 244
           + TE   K  ++FEE+
Sbjct: 496 EETEDLRKQRQKFEEE 511


>08_02_0520 -
           18121561-18121821,18122216-18122470,18122560-18122731,
           18122824-18123105,18123159-18123292,18123425-18123508,
           18123611-18123901,18123982-18124314,18124620-18124750,
           18124826-18124930,18125011-18125167,18125248-18125351,
           18125442-18125602,18125800-18126116,18126369-18126650,
           18127011-18127312,18127609-18127699,18127771-18127824,
           18128110-18128186,18128279-18128438,18128545-18128629,
           18129059-18129367,18129514-18129890
          Length = 1507

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 27/105 (25%), Positives = 41/105 (39%)
 Frame = +2

Query: 65  ENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 244
           E+  EF +++G     RK        V  RKD  +Y   T   ++     + P +EF   
Sbjct: 460 EHVLEFFESMGFKCPDRKGVADFLQEVTSRKDQQQYWARTHQPYR-----YIPVQEFA-C 513

Query: 245 RADGAKVKSVCTFRRXHP*SKSRRXPTVLKSLTSGNSXPEEMKSC 379
                 V    +    HP  KS   P  L + T G S  E +++C
Sbjct: 514 AFQSFHVGQTLSDELSHPFDKSTSHPASLTTSTYGASKLELLRTC 558


>10_08_0308 +
           16660751-16661450,16661656-16661819,16662615-16662800,
           16663297-16663533
          Length = 428

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 91  HRRGSDHPQSRQRCHPDRGAP 153
           HRRG      RQRC   RGAP
Sbjct: 87  HRRGPSLVPGRQRCGGARGAP 107


>04_01_0572 +
           7404842-7405502,7405581-7406143,7406338-7406479,
           7406605-7407436,7407546-7407729
          Length = 793

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/50 (34%), Positives = 19/50 (38%)
 Frame = +2

Query: 341 TSGNSXPEEMKSCDDS*GRDLHQSLQGPVKGLYSEXGSPGPPIHEHPRGT 490
           TSG+S      SC DS       S      G +   G P PP   H R T
Sbjct: 471 TSGSSIDSSSGSCTDSSSCSYTYSPASSSSGTFKVNGPPAPP-PAHTRAT 519


>03_02_0254 +
           6862762-6863663,6863994-6864241,6864323-6864465,
           6864532-6864570,6865403-6865501
          Length = 476

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 145 HGRGDSVGGFAGDQTHADGLH 83
           HG G + G F G + H DG+H
Sbjct: 271 HGFGRTNGQFLGGRAHGDGVH 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,936,153
Number of Sequences: 37544
Number of extensions: 252539
Number of successful extensions: 654
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)