Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306G10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 92 3e-19
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 90 1e-18
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 82 3e-16
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 74 5e-14
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 74 5e-14
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 42 3e-04
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 38 0.004
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 38 0.004
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 33 0.12
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 33 0.12
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 33 0.12
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 33 0.12
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 31 0.38
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 2.0
AL161712-16|CAC35892.1| 329|Caenorhabditis elegans Hypothetical... 28 3.5
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 6.2
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 6.2
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 91.9 bits (218), Expect = 3e-19
Identities = 45/88 (51%), Positives = 61/88 (69%)
Frame = +2
Query: 20 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 199
+ EFVG+ +K+ SENF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK
Sbjct: 1 MSQEFVGR-WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFK 59
Query: 200 TTEMKFKPGEEFEEDRADGAKVKSVCTF 283
T + FK G+EF+E DG VKSV F
Sbjct: 60 NTTLSFKLGQEFDETTPDGRTVKSVVNF 87
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/85 (50%), Positives = 59/85 (69%)
Frame = +2
Query: 29 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 208
+F+G+ +K+ +ENFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T+
Sbjct: 6 DFIGR-WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTK 64
Query: 209 MKFKPGEEFEEDRADGAKVKSVCTF 283
+ FK GEEF E+ D S+ TF
Sbjct: 65 LSFKLGEEFVENSPDDRTYNSLFTF 89
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 81.8 bits (193), Expect = 3e-16
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +2
Query: 29 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 208
+FVG+ +K+ SENF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T
Sbjct: 5 QFVGR-WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTT 63
Query: 209 MKFKPGEEFEEDRADGAKVKSVCT 280
++F G EF+E DG + KS T
Sbjct: 64 LEFTLGVEFDETTPDGRQFKSTIT 87
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 79.0 bits (186), Expect = 2e-15
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = +2
Query: 29 EFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTE 208
EF+G+ +K+ SENF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK +
Sbjct: 6 EFIGR-WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNK 64
Query: 209 MKFKPGEEFEEDRADGAKVKSVCTF 283
+ FK E+F E D ++ TF
Sbjct: 65 LAFKIREKFVEIAPDERSYNTLVTF 89
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 74.1 bits (174), Expect = 5e-14
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +2
Query: 20 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 199
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 3 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 61
Query: 200 TTEMKFKPGEEFEEDRADGAKVKSVCTFRRXH 295
+K+K G +E ADG V SV + H
Sbjct: 62 NYTLKWKLGTASDEKTADGRDVSSVFSIENDH 93
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 74.1 bits (174), Expect = 5e-14
Identities = 37/92 (40%), Positives = 53/92 (57%)
Frame = +2
Query: 20 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFK 199
I+ + VGK + SSENFDE++K +GVG R A P +E +GDE+ + ++STFK
Sbjct: 18 IQTDLVGK-WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFK 76
Query: 200 TTEMKFKPGEEFEEDRADGAKVKSVCTFRRXH 295
+K+K G +E ADG V SV + H
Sbjct: 77 NYTLKWKLGTASDEKTADGRDVSSVFSIENDH 108
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +2
Query: 17 SIKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSS 190
S+ +F G+ Y++ SENFDEF+ + GV R+ +T + ++ +YN+ +
Sbjct: 2 SVPDKFFGR-YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLT 60
Query: 191 TFKTTEMK-FKPGEEFEEDRADG 256
+ K T + ++ G++FE DG
Sbjct: 61 SKKNTNYQAWELGKKFEAPGLDG 83
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 20 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 193
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 8 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 66
Query: 194 FKTTEMK-FKPGEEFEEDRADGAKVKSVCTFR 286
K T ++ G+ FE + DG K +F+
Sbjct: 67 KKNTLYHGWELGKTFEAEGLDGVAHKITFSFK 98
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 20 IKMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSST 193
I +F GK Y + SENFDEF+ GV R+ + L K+ +YN+ ++
Sbjct: 23 IPEKFFGK-YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTS 81
Query: 194 FKTTEMK-FKPGEEFEEDRADGAKVKSVCTFR 286
K T ++ G+ FE + DG K +F+
Sbjct: 82 KKNTLYHGWELGKTFEAEGLDGVAHKITFSFK 113
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +2
Query: 47 YKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF--- 217
+ + SENFDE++ G G TRK T K+ ++ NL S + + F
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANK-NLFDYSNLTSKKDVFYKN 88
Query: 218 -KPGEEFEEDRADGAKVKSVCTFRRXH 295
+ G +FE + D K + T + H
Sbjct: 89 VQIGSKFEGEGLDNTKHEVTFTLKDGH 115
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 59 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 223
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 59 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 223
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 59 SSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 223
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 31.5 bits (68), Expect = 0.38
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +2
Query: 47 YKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP- 223
+ + SENFDE++ G G TRK T K ++ S+ ++ +K
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNV 87
Query: 224 --GEEFEEDRADGAKVKSVCTFRRXH 295
G+ F+ + D K + T + H
Sbjct: 88 QLGKAFQGEGLDSTKHEITFTLKDGH 113
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 241
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>AL161712-16|CAC35892.1| 329|Caenorhabditis elegans Hypothetical
protein Y66D12A.21 protein.
Length = 329
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 310 GLASGVXPSECAYGFHLSTVSAVLFELF 227
G+ + PS C YG H+S + VL +F
Sbjct: 72 GIFNRTVPSACHYGAHVSYTTTVLLSIF 99
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -3
Query: 213 FISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSS 73
F S++ K VT S +L SST + +A+ I PT +F NSS
Sbjct: 845 FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSS 891
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +2
Query: 83 MKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAK 262
+K + G I +K + P + + +DG Y K ++FK E FE+ +
Sbjct: 241 IKVLPAGKIEKKLIKELNPEMMVGRDGRRYRQKLREAEKQATVEFKL-ENFEQTNGEAQS 299
Query: 263 VKS 271
V++
Sbjct: 300 VEN 302
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 92 IGVGLITRKAANAVTPTVELRKDGDEYNL 178
+ + L+ KA N + V +RKDGD NL
Sbjct: 166 VDISLLVDKATNYILNPVLIRKDGDMSNL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,571,868
Number of Sequences: 27780
Number of extensions: 198400
Number of successful extensions: 570
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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