Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306G09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p pro...    33   0.23 
AL031884-2|CAB40750.1|  704|Drosophila melanogaster EG:23E12.5 p...    33   0.23 

>BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p
           protein.
          Length = 1403

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 377 SPRTTVYE*H*NQSKLFSSRPKPEMLRHKQPPLLPRAERESHP 505
           SP  T Y  H    K    RP P+ +R  +PP +P  +  S P
Sbjct: 286 SPSLTSYAAHVEAKKKMPPRPPPKNIRRVEPPTIPSQQLSSSP 328


>AL031884-2|CAB40750.1|  704|Drosophila melanogaster EG:23E12.5
           protein.
          Length = 704

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 377 SPRTTVYE*H*NQSKLFSSRPKPEMLRHKQPPLLPRAERESHP 505
           SP  T Y  H    K    RP P+ +R  +PP +P  +  S P
Sbjct: 286 SPSLTSYAAHVEAKKKMPPRPPPKNIRRVEPPTIPSQQLSSSP 328


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,642,088
Number of Sequences: 53049
Number of extensions: 425771
Number of successful extensions: 964
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)