Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306G09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450...    33   0.12 
Z93778-6|CAB07843.2|  554|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z93389-10|CAB07674.1|  417|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z93379-11|CAB07595.1|  417|Caenorhabditis elegans Hypothetical p...    28   4.7  
AY523514-1|AAR98636.1|  554|Caenorhabditis elegans acetylcholine...    28   4.7  

>U53148-7|AAB37074.4|  529|Caenorhabditis elegans Cytochrome p450
           family protein 32A1 protein.
          Length = 529

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 143 KWYHTRQP*HAKFYFRVVADYIKTFIKSASV 235
           KW+H R+     F+F ++ DY   F+++A V
Sbjct: 146 KWFHRRKMLTPTFHFTIIQDYFPVFVRNAEV 176


>Z93778-6|CAB07843.2|  554|Caenorhabditis elegans Hypothetical
           protein C31H5.3 protein.
          Length = 554

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 461 YDVTFPVSVLTRIVCFGFN 405
           YDVTF VS+  R + +GFN
Sbjct: 217 YDVTFTVSIRRRTLYYGFN 235


>Z93389-10|CAB07674.1|  417|Caenorhabditis elegans Hypothetical
           protein F21H7.10 protein.
          Length = 417

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 375 SHRGLQYTNSIETKANYSRQD 437
           SHRG+++TN+I +KA  + Q+
Sbjct: 365 SHRGIKHTNTIYSKATIAHQE 385


>Z93379-11|CAB07595.1|  417|Caenorhabditis elegans Hypothetical
           protein F21H7.10 protein.
          Length = 417

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 375 SHRGLQYTNSIETKANYSRQD 437
           SHRG+++TN+I +KA  + Q+
Sbjct: 365 SHRGIKHTNTIYSKATIAHQE 385


>AY523514-1|AAR98636.1|  554|Caenorhabditis elegans acetylcholine
           receptor (63.2 kD)(acr-19) protein.
          Length = 554

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 461 YDVTFPVSVLTRIVCFGFN 405
           YDVTF VS+  R + +GFN
Sbjct: 217 YDVTFTVSIRRRTLYYGFN 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,349,987
Number of Sequences: 27780
Number of extensions: 226893
Number of successful extensions: 490
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)