Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306G08f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 189 3e-47
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 182 6e-45
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 159 4e-38
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 157 1e-37
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 155 6e-37
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 154 1e-36
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 154 1e-36
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 151 7e-36
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 150 2e-35
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 147 1e-34
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 136 4e-31
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 132 4e-30
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 132 4e-30
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 132 4e-30
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 131 1e-29
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 129 4e-29
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 129 4e-29
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 128 6e-29
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 126 4e-28
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 123 3e-27
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 122 5e-27
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 119 5e-26
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 117 2e-25
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 115 6e-25
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 115 6e-25
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 115 6e-25
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 115 6e-25
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 114 1e-24
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 109 5e-23
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 107 2e-22
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 107 2e-22
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 90 3e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 89 8e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 85 7e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 84 2e-15
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 84 2e-15
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 83 3e-15
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 83 3e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 3e-14
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 78 1e-13
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 76 6e-13
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 75 8e-13
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 69 5e-11
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 69 7e-11
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 65 8e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 64 1e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 63 3e-09
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 62 6e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 62 7e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 62 7e-09
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 62 1e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 5e-08
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 59 7e-08
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 57 2e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 57 3e-07
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 56 4e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 56 7e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 56 7e-07
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 53 3e-06
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 53 3e-06
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 53 3e-06
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 53 3e-06
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 53 5e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 51 1e-05
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 50 3e-05
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 49 7e-05
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 49 7e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 48 1e-04
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 48 1e-04
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 48 1e-04
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 48 2e-04
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 47 2e-04
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 47 3e-04
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 47 3e-04
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 46 4e-04
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 45 0.001
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.001
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 44 0.002
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 44 0.002
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 42 0.006
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 42 0.009
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 40 0.026
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 40 0.026
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 40 0.026
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.060
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 39 0.080
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 38 0.14
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 38 0.18
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 37 0.24
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 37 0.32
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 36 0.43
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 36 0.74
UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1; Pi... 34 1.7
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 3.0
UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=... 33 3.0
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 4.0
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 33 5.2
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 33 5.2
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 6.9
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 32 6.9
UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease ... 32 9.2
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 189 bits (461), Expect = 3e-47
Identities = 102/168 (60%), Positives = 110/168 (65%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
+G++GTSL LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL
Sbjct: 23 AGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPL 82
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDL
Sbjct: 83 MLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDL 142
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
AIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 143 AIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAF 190
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 182 bits (442), Expect = 6e-45
Identities = 97/165 (58%), Positives = 106/165 (64%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
++GTSL LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+L
Sbjct: 1 MVGTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLML 60
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
GAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAI
Sbjct: 61 GAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAI 120
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
FSLHLAGISS SFDQ+PLF+ AVGITA
Sbjct: 121 FSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITA 165
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 159 bits (386), Expect = 4e-38
Identities = 89/167 (53%), Positives = 102/167 (61%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
+G+IGT+L LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 27 AGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPL 86
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 87 MIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDL 146
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
AIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 147 AIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITA 193
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 157 bits (381), Expect = 1e-37
Identities = 90/166 (54%), Positives = 103/166 (62%)
Frame = -2
Query: 508 AVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDE 329
AV T TN G S I +R I+E PAKC+EKI STD P CAI
Sbjct: 43 AVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLA 102
Query: 328 SGG*TVHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXX 149
SGG TVHPVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP
Sbjct: 103 SGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMI 162
Query: 148 XXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIP 11
KA AVT+ L I S PI PG PNSARIKSL DVP +P
Sbjct: 163 GMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMP 207
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 155 bits (376), Expect = 6e-37
Identities = 84/167 (50%), Positives = 98/167 (58%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
SG+IGT+L LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL
Sbjct: 9 SGLIGTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPL 68
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDL
Sbjct: 69 MLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDL 128
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
AIFSLHLAG+SS + + LFV +V ITA
Sbjct: 129 AIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITA 175
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 154 bits (373), Expect = 1e-36
Identities = 84/167 (50%), Positives = 99/167 (59%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL
Sbjct: 15 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPL 74
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 75 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDL 134
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 135 TIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITA 181
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 154 bits (373), Expect = 1e-36
Identities = 84/167 (50%), Positives = 99/167 (59%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 26 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPL 85
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 86 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDL 145
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 146 TIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTA 192
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 151 bits (367), Expect = 7e-36
Identities = 82/167 (49%), Positives = 99/167 (59%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 26 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPL 85
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 86 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDL 145
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 146 TIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTA 192
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 150 bits (363), Expect = 2e-35
Identities = 81/167 (48%), Positives = 99/167 (59%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
+G++GT+L LLIRAELG PG+L+G+D IYN IVTAHA N LVPL
Sbjct: 26 AGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPL 85
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL
Sbjct: 86 MIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDL 145
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 146 TIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITA 192
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 147 bits (357), Expect = 1e-34
Identities = 79/167 (47%), Positives = 97/167 (58%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
SG IGT+ +LIR EL +PGS++GDD +YN IVTAHA N VPL
Sbjct: 27 SGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPL 86
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+
Sbjct: 87 MIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDM 146
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 147 AIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITA 193
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 136 bits (328), Expect = 4e-31
Identities = 74/167 (44%), Positives = 94/167 (56%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
SG++G S+ L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL
Sbjct: 10 SGMLGFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPL 69
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H G SVDL
Sbjct: 70 MLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDL 129
Query: 369 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
IFSLHLAG SS + D++ LF +V ITA
Sbjct: 130 GIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITA 176
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 132 bits (320), Expect = 4e-30
Identities = 76/169 (44%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SV
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSV 143
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
DLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 144 DLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTA 192
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 132 bits (320), Expect = 4e-30
Identities = 76/169 (44%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SV
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSV 143
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
DLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 144 DLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTA 192
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 132 bits (320), Expect = 4e-30
Identities = 76/169 (44%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SV
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSV 143
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
DLAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 144 DLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTA 192
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 131 bits (316), Expect = 1e-29
Identities = 71/170 (41%), Positives = 94/170 (55%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+G++GT +LIR EL PG I G+ Q+YN ++TAHA N V
Sbjct: 27 AGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFV 86
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H G +V
Sbjct: 87 PILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAV 146
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
DLAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 147 DLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAF 196
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 129 bits (311), Expect = 4e-29
Identities = 75/170 (44%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
DLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 145 DLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAF 194
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 129 bits (311), Expect = 4e-29
Identities = 75/170 (44%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
DLAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 145 DLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAF 194
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 128 bits (310), Expect = 6e-29
Identities = 70/170 (41%), Positives = 95/170 (55%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG++G + +LIR EL P + L+G+ QIYN ++TAHA N LV
Sbjct: 32 SGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLV 91
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H G +V
Sbjct: 92 PIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAV 151
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
DLAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 152 DLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAF 201
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 126 bits (303), Expect = 4e-28
Identities = 72/170 (42%), Positives = 94/170 (55%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG+ G+++ ++IR EL PGS L G+ Q++N +V HA N ++
Sbjct: 25 SGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYML 84
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
DLAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 145 DLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAF 194
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 123 bits (296), Expect = 3e-27
Identities = 71/169 (42%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG+ GT++ L+IR EL PG L G++Q++N +V HA N ++
Sbjct: 25 SGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYML 84
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSV 144
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
DLAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 145 DLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITA 193
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 122 bits (294), Expect = 5e-27
Identities = 71/168 (42%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 185
+G+IGT+ +LIR EL PG I D+Q+YN+I+TAHA N L+P
Sbjct: 26 AGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLP 85
Query: 186 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 365
L LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H G SVD
Sbjct: 86 LGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVD 145
Query: 366 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
LAIF LHL+GISS +L LF AV ITA
Sbjct: 146 LAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITA 193
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 119 bits (286), Expect = 5e-26
Identities = 65/168 (38%), Positives = 87/168 (51%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 185
SG++GT+ +LIR EL PG I D+Q+YN+I+T+H N L+P
Sbjct: 52 SGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLP 111
Query: 186 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 365
+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H VD
Sbjct: 112 ILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVD 171
Query: 366 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
L IF LHL+GISS +L LF AV ITA
Sbjct: 172 LGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITA 219
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 117 bits (281), Expect = 2e-25
Identities = 62/137 (45%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 185
SG++GT+ +LIR EL PG I ++Q+YN+I+TAHA N L+P
Sbjct: 54 SGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMP 113
Query: 186 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRG 353
L++G PD+AFPR+NNI F I+E G GTG T+ YPPLS +H G
Sbjct: 114 LMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSG 173
Query: 354 RSVDLAIFSLHLAGISS 404
SVDLAIF+LHL+G+SS
Sbjct: 174 PSVDLAIFALHLSGVSS 190
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 115 bits (277), Expect = 6e-25
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 115 bits (277), Expect = 6e-25
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 115 bits (277), Expect = 6e-25
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 115 bits (277), Expect = 6e-25
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
D+AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITA 210
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 114 bits (274), Expect = 1e-24
Identities = 69/169 (40%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
S +IGT L +IR EL N GS L G+ Q +N ++TAHA N L+
Sbjct: 30 SAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLM 89
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H G +V
Sbjct: 90 PLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAV 149
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
DLAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 150 DLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTA 198
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 109 bits (261), Expect = 5e-23
Identities = 58/108 (53%), Positives = 69/108 (63%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
+G+IGT+L LLIRAELG PG+L+GDDQ N IVTAHA N LVPL
Sbjct: 27 AGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPL 86
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 332
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 87 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 107 bits (257), Expect = 2e-22
Identities = 63/170 (37%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+G + L +L+R EL PG L G+ YN I T H N V
Sbjct: 28 NGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFV 87
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P+++GAPD++FPR+NN F E G GTG TVYPPLSS +H G SV
Sbjct: 88 PILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASV 147
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
DL IFS HL GI S LPLFV +V +T+F
Sbjct: 148 DLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSF 197
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 107 bits (256), Expect = 2e-22
Identities = 60/132 (45%), Positives = 73/132 (55%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
SG++GTSL L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL
Sbjct: 10 SGLLGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPL 69
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
+LGAPD+AFPR+NN+ F + G + PL G SVDL
Sbjct: 70 MLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDL 127
Query: 369 AIFSLHLAGISS 404
AIF LHLAG+SS
Sbjct: 128 AIFPLHLAGVSS 139
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 89.8 bits (213), Expect = 3e-17
Identities = 67/188 (35%), Positives = 89/188 (47%), Gaps = 20/188 (10%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPG-------SLIGD------DQIY---NTIVTAHAXXXXXXX 140
+GIIG ++ L+RAEL PG + D DQ Y N ++TAH
Sbjct: 50 AGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNVLITAHGLIMVFFM 109
Query: 141 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG 308
N VP+++GAPD+AFPR+NNI F V NGAGTG
Sbjct: 110 VMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTG 169
Query: 309 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 488
TVY PLS++ G +VD+AI SLH+AG SS + ++PLFV
Sbjct: 170 WTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFV 228
Query: 489 *AVGITAF 512
+V +TAF
Sbjct: 229 WSVLVTAF 236
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 88.6 bits (210), Expect = 8e-17
Identities = 53/108 (49%), Positives = 60/108 (55%)
Frame = +3
Query: 186 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 365
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 366 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
LAIFSLH+AG+ S + ++PLFV AV ITA
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITA 111
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 85.4 bits (202), Expect = 7e-16
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Frame = +3
Query: 45 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 218
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 219 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 398
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 399 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
SS + ++PLF +V +TA+
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAW 299
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 83.8 bits (198), Expect = 2e-15
Identities = 44/132 (33%), Positives = 67/132 (50%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
SG+ G SL +R EL +PG + +Y++I+T HA N +PL
Sbjct: 28 SGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPL 87
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
++ D++ PR+NN+ + G G G T+YPPLS++ G +DL
Sbjct: 88 MIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDL 147
Query: 369 AIFSLHLAGISS 404
A+FSLH+AG+SS
Sbjct: 148 AVFSLHMAGMSS 159
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 83.8 bits (198), Expect = 2e-15
Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 341
P+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 83.4 bits (197), Expect = 3e-15
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+G+ G+ L +LIR EL +PG G Q+YN+++T H N ++
Sbjct: 35 AGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWML 94
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
PL+LGAP++AFPR+N + F + G G+ T YPPLS S+
Sbjct: 95 PLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSL 153
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
D I LH GI S + DQ+ +FV +T+F
Sbjct: 154 DTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSF 203
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 83.4 bits (197), Expect = 3e-15
Identities = 53/169 (31%), Positives = 70/169 (41%), Gaps = 2/169 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
SG +G L IR EL G L GD Q YN ++T+H N +
Sbjct: 27 SGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFI 86
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P++ G PD+ FPR+NN+ F + E G G G T+YP L H +
Sbjct: 87 PVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLAC 146
Query: 363 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
D +F++HL GISS SF LF+ A ITA
Sbjct: 147 DFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITA 195
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +3
Query: 186 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 365
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 366 LAIFS 380
LAI+S
Sbjct: 61 LAIYS 65
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 77.8 bits (183), Expect = 1e-13
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+G++GT +LIR EL PG+ I G+ Q+YN ++TAHA N V
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFV 87
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 317
P+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 88 PILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 75.8 bits (178), Expect = 6e-13
Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
S +IGT L +IR EL N GS L G+ Q +N ++TAHA N L+
Sbjct: 30 SAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLM 89
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 341
PL+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 90 PLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 75.4 bits (177), Expect = 8e-13
Identities = 50/128 (39%), Positives = 58/128 (45%)
Frame = +3
Query: 21 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 200
G L R L G +IG QI VTA A L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 201 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 380
P +A PR+ N+ F + G G VYPP SS +AH +VDL IF
Sbjct: 80 PXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFX 139
Query: 381 LHLAGISS 404
LHLAGISS
Sbjct: 140 LHLAGISS 147
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 69.3 bits (162), Expect = 5e-11
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +3
Query: 12 GIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 185
G+ GT++ ++IR EL PG+ L G+ Q++N +V HA N L+P
Sbjct: 26 GMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLP 85
Query: 186 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 317
L++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 86 LMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 68.9 bits (161), Expect = 7e-11
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Frame = +3
Query: 12 GIIGTSLRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
G+IG + +LIR EL G +I D +IYN + T H N L
Sbjct: 32 GMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLY 91
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 362
P++LG D+ +PR+N +E G+GTG T+YPPLS+++++ G +
Sbjct: 92 PVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--I 149
Query: 363 DLAIFSLHLAGISS 404
D IF L AGI+S
Sbjct: 150 DFIIFGLLAAGIAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 65.3 bits (152), Expect = 8e-10
Identities = 45/132 (34%), Positives = 60/132 (45%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
S ++G S LL R +L P L D +YN VT H N L+P
Sbjct: 23 SALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPY 80
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 368
PD+ FPR+N + F ++ + A G T YPPLSS SV+
Sbjct: 81 HCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEF 131
Query: 369 AIFSLHLAGISS 404
++FSLHLAGI+S
Sbjct: 132 SVFSLHLAGIAS 143
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 64.5 bits (150), Expect = 1e-09
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Frame = +3
Query: 12 GIIGTSLRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
G G L +++R EL + +I + + YN I T H N +
Sbjct: 29 GSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFL 88
Query: 183 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-S 359
P++ G+P++A+PRIN+I E G GTG T+YPPLS+++ +
Sbjct: 89 PILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVA 148
Query: 360 VDLAIFSLHLAGISS 404
VD+ IF L ++G++S
Sbjct: 149 VDVIIFGLLVSGVAS 163
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 63.3 bits (147), Expect = 3e-09
Identities = 47/165 (28%), Positives = 66/165 (40%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
++G LLIR EL PG I D YN T H N ++PL+L
Sbjct: 58 LVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLML 117
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
GA D+AFPR+N + ++ G TG T Y P S AH +V +
Sbjct: 118 GAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVL 173
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
F + G SS ++ ++PLFV A+ T+
Sbjct: 174 FGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATS 218
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 62.5 bits (145), Expect = 6e-09
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 176
+GI+G + +LIR EL G I + IYN +T H N
Sbjct: 32 AGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNY 91
Query: 177 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSNIAHR- 350
L+P+++G +++ PR+N I F + + +G T+YPPLS+ A
Sbjct: 92 LIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNI 151
Query: 351 GRSVDLAIFSLHLAGISS 404
G ++DL++ +H+ GISS
Sbjct: 152 GVNIDLSLLVVHVLGISS 169
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 62.1 bits (144), Expect = 7e-09
Identities = 48/164 (29%), Positives = 67/164 (40%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 197
+G LLIR EL PG I D YN + T H N L+P+++G
Sbjct: 52 LGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIG 111
Query: 198 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 377
A D+AFP++N + F +V+ GA TG T Y P S+ + V L F
Sbjct: 112 AKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVLLGAF 170
Query: 378 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
L G SS + +LPLFV ++ T+
Sbjct: 171 IL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATS 211
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 62.1 bits (144), Expect = 7e-09
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 197
+G + +L+R EL +PG + + YN+++T+H N L+PL++G
Sbjct: 111 VGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIG 169
Query: 198 APDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS-----SNIAHRG 353
A D+AFPRIN I F I E A TG T+Y PLS N A+ G
Sbjct: 170 ADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG 229
Query: 354 RSVDLAIFSLHLAGISS 404
VDL + LHL+G+S+
Sbjct: 230 --VDLMLLGLHLSGVSA 244
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 61.7 bits (143), Expect = 1e-08
Identities = 43/131 (32%), Positives = 57/131 (43%)
Frame = +3
Query: 12 GIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 191
G IG L LLIR L +P + +YN +VT H N +P+
Sbjct: 125 GFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIF 184
Query: 192 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 371
L D+ PR+N++ + G G G T+YPPLS G VD
Sbjct: 185 LCLDDLLLPRLNSLSLWLMVPSIFYMELS--LYYGCGIGWTLYPPLSI-WEGSGFGVDYL 241
Query: 372 IFSLHLAGISS 404
+FSLHLAG+SS
Sbjct: 242 MFSLHLAGVSS 252
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 5e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 282 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 404
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 58.8 bits (136), Expect = 7e-08
Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 197
+G + LLIRAEL PG ++ +N + T H N ++PL +G
Sbjct: 55 LGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIG 113
Query: 198 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAI 374
APD+AFPR+N F + GA G T+Y PLS I G D+ I
Sbjct: 114 APDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWI 173
Query: 375 FSLHLAGISS 404
+ GI S
Sbjct: 174 VGVGATGIGS 183
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 57.2 bits (132), Expect = 2e-07
Identities = 36/123 (29%), Positives = 52/123 (42%)
Frame = +3
Query: 36 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 215
L++RA+L P + D YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 216 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 395
P +NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 396 ISS 404
I +
Sbjct: 195 IGT 197
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 56.8 bits (131), Expect = 3e-07
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
++G L +++R EL P + + D +YN + T H N L+P ++
Sbjct: 52 LVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMI 110
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVD 365
GAPD+AFP++N F G A +G YPP+S + + H
Sbjct: 111 GAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEF 170
Query: 366 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 488
L I ++ L+GISS F ++P+FV
Sbjct: 171 LWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFV 211
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 56.4 bits (130), Expect = 4e-07
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNP-------GSLI-GDDQI-----YNTIVTAHAXXXXXXXXXXXX 155
++G +L +LIR + G P G L+ G+ + Y I T H
Sbjct: 47 LVGGALAMLIRWQWGFPYRPVPLVGRLLFGESGVIGPATYQQIFTTHGLVMIFFAVTPVL 106
Query: 156 XXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS 332
N L+PL++GA D+AFPR+N F G AG G T Y PLS
Sbjct: 107 IGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLS 166
Query: 333 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
+N+ G L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 167 TNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTA 225
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 55.6 bits (128), Expect = 7e-07
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +3
Query: 324 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 503
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 504 T 506
T
Sbjct: 132 T 132
Score = 35.1 bits (77), Expect = 0.98
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 158 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 283
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 55.6 bits (128), Expect = 7e-07
Identities = 40/130 (30%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
+I SL LL R +L P S Y VT H N +VPL +
Sbjct: 37 LIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQI 95
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLA 371
GA D+AFPR+N + + E+GA G T+Y PL++ I G +DLA
Sbjct: 96 GARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLA 155
Query: 372 IFSLHLAGIS 401
++ L +S
Sbjct: 156 ALAIFLFSLS 165
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 53.2 bits (122), Expect = 3e-06
Identities = 44/166 (26%), Positives = 65/166 (39%), Gaps = 1/166 (0%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
+G L LL+R +L P + IG D+ YN I T H LVPL++
Sbjct: 46 LGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMV 103
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
G IAFPR+N + V+ G G Y PLS G+ D+
Sbjct: 104 GTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWA 163
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
+ +S+ S D++PLFV ++ +T+F
Sbjct: 164 QMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSF 209
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 53.2 bits (122), Expect = 3e-06
Identities = 35/114 (30%), Positives = 49/114 (42%)
Frame = +3
Query: 63 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 242
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 243 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 404
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASS 113
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 53.2 bits (122), Expect = 3e-06
Identities = 40/157 (25%), Positives = 59/157 (37%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 197
+G LL+R +L P + +++N + T H N VPL++G
Sbjct: 49 VGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIG 107
Query: 198 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 377
A D+AFPR+N+ F + + G Y PLSS + VD I
Sbjct: 108 ARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWII 167
Query: 378 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 488
L + GI S S ++PLFV
Sbjct: 168 GLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFV 204
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 53.2 bits (122), Expect = 3e-06
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +3
Query: 36 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 215
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 216 PRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 389
PRIN I F ++ A T T+Y PLS ++ +VD+ + LHL
Sbjct: 150 PRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHL 207
Query: 390 AGISS 404
G+S+
Sbjct: 208 TGVSA 212
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 52.8 bits (121), Expect = 5e-06
Identities = 41/166 (24%), Positives = 62/166 (37%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
+IG LL+R +LG P + +YN + T H N +VPL++
Sbjct: 47 LIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMI 105
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
GA D+AFPR+N + V G Y PL+ VD I
Sbjct: 106 GARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWI 165
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
+ L G++S + +++PLFV + AF
Sbjct: 166 VGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAF 211
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 51.2 bits (117), Expect = 1e-05
Identities = 39/165 (23%), Positives = 62/165 (37%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
++G L +LIRA+L P S + YN + T H L+P +L
Sbjct: 45 VVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLL 103
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
G+ D+AFPR+ F + +G +YPPLSS + G + D +
Sbjct: 104 GSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWL 163
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
+ IS+ S ++P+F +TA
Sbjct: 164 IGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTA 208
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 50.0 bits (114), Expect = 3e-05
Identities = 40/129 (31%), Positives = 52/129 (40%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 197
IG S +R EL P ++YN ++T H N L+PL++G
Sbjct: 44 IGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVG 102
Query: 198 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 377
D+AFPR+N + F V G T YPPLS G +L I
Sbjct: 103 TEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWIL 159
Query: 378 SLHLAGISS 404
SL L G SS
Sbjct: 160 SLLLVGTSS 168
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 48.8 bits (111), Expect = 7e-05
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Frame = +3
Query: 87 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 266
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 267 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 434
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 435 XXXXXXXXXSFDQLPLFV*AVGITA 509
+ +LPL + A+ ITA
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITA 230
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 48.8 bits (111), Expect = 7e-05
Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 1/155 (0%)
Frame = +3
Query: 36 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 215
LLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 216 PRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 392
PR+N + GA G T Y P S A VD + ++ L
Sbjct: 107 PRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLL 163
Query: 393 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 497
G SS S ++P++V +V
Sbjct: 164 GFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSV 198
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.4 bits (110), Expect = 1e-04
Identities = 35/157 (22%), Positives = 61/157 (38%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
+IG L +LIRA+L +P S + Y + T H L+P +L
Sbjct: 45 LIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKML 103
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
G+ D+A+PR++ F + +G +YPPL+S + G + D +
Sbjct: 104 GSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWL 163
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 485
+ IS+ S D++P++
Sbjct: 164 LGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHA 119
SG+IG+S+ +LIR EL GS++ +QIYNT+VT+HA
Sbjct: 10 SGLIGSSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 182
+G+ G +L +IR EL +P S GD Y +VTAH N L+
Sbjct: 74 TGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLI 133
Query: 183 PLILGAPDIAFPRINNIRF 239
P +G+ D+A+PR+N+I F
Sbjct: 134 PYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 47.6 bits (108), Expect = 2e-04
Identities = 37/166 (22%), Positives = 62/166 (37%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
I+G L LL+R +L P + D + YN + + H ++PL+L
Sbjct: 52 ILGVILALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLML 110
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
G D+ FPR+N + ++ G YPPL+ G +D
Sbjct: 111 GTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYT 170
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
+ IS+ S +++P+FV AV + +F
Sbjct: 171 TVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSF 216
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 47.2 bits (107), Expect = 2e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 171 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 347
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 348 RGRSVDLAIFSLHLAGISS 404
+ VDL + + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 46.8 bits (106), Expect = 3e-04
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Frame = +3
Query: 30 LRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 206
+ +LIR EL G I DD +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 207 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS----SNIAHRGRSVDLAI 374
+AFPR+N + + + T YPP S N A SV L
Sbjct: 95 VAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSIITHGNTAFYTFSVLLLG 154
Query: 375 FSLHLAGIS 401
F+ L G++
Sbjct: 155 FASILGGVN 163
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 46.8 bits (106), Expect = 3e-04
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +3
Query: 12 GIIGTSLRLLIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 188
G++ L L+R +LG PG+ D Y +T H N L+PL
Sbjct: 53 GLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPL 112
Query: 189 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 326
++GA D+ FP +N + + V G G G T+YPP
Sbjct: 113 MVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 46.4 bits (105), Expect = 4e-04
Identities = 34/157 (21%), Positives = 59/157 (37%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
++G + IR +L P + Q YN ++T H N +VPL +
Sbjct: 40 LVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQI 98
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
GA D++FP +N + F + G T Y LS + +G +D +
Sbjct: 99 GARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFV 156
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 485
L ++G+ + ++ +LPLF
Sbjct: 157 LGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +3
Query: 171 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 350
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 351 GRSVDLAIFSLHLAGISS 404
VD I++L ++GI +
Sbjct: 185 DVGVDYYIWALQISGIGT 202
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/78 (34%), Positives = 38/78 (48%)
Frame = +3
Query: 171 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 350
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 351 GRSVDLAIFSLHLAGISS 404
G VD I++L L+G+ +
Sbjct: 184 GVGVDYYIWALQLSGLGT 201
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 44.4 bits (100), Expect = 0.002
Identities = 36/166 (21%), Positives = 61/166 (36%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
+I LL+R +L P + + YN + T H L+PL++
Sbjct: 71 LIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMI 129
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
GA D+ FPR+ + + + G +Y PLS++ G S D +
Sbjct: 130 GARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWL 189
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 512
+ LA I+S S ++P+ + + TAF
Sbjct: 190 IGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAF 235
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 44.4 bits (100), Expect = 0.002
Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 1/156 (0%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
+G +L LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 37 LGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMV 95
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
D+A+P++N I F + T PP S I+ G + D+ I
Sbjct: 96 RYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWI 149
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 482
F L + GISS S Q+PL
Sbjct: 150 FGLKILGISSILGSINFIVTILKCKHPDMSLGQVPL 185
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 42.3 bits (95), Expect = 0.006
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +3
Query: 171 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 350
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 351 GRSVDLAIFSLHLAGISS 404
VD +S+ ++GI +
Sbjct: 179 WVGVDYWNWSIQISGIGT 196
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 41.9 bits (94), Expect = 0.009
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 171 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 350
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 351 GRSVDLAIFSLHLAGISS 404
G VD I+SL LA + S
Sbjct: 204 GIGVDYWIWSLTLASLGS 221
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 40.3 bits (90), Expect = 0.026
Identities = 32/126 (25%), Positives = 44/126 (34%)
Frame = +3
Query: 18 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 197
+G L L IR +L P + YN ++T HA N +PL LG
Sbjct: 49 LGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLG 108
Query: 198 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 377
D+A PR+N G T Y PL+ + G SV +
Sbjct: 109 VRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAV 168
Query: 378 SLHLAG 395
L+ G
Sbjct: 169 ILNGLG 174
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 40.3 bits (90), Expect = 0.026
Identities = 30/107 (28%), Positives = 43/107 (40%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
+ G L LL R EL + G+ + YN V+ H N LVPL +
Sbjct: 38 VFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQI 96
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 335
GA D+AFPR+N + + G T+Y PL++
Sbjct: 97 GADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 40.3 bits (90), Expect = 0.026
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHA 119
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.060
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +2
Query: 215 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 385
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 38.7 bits (86), Expect = 0.080
Identities = 35/158 (22%), Positives = 59/158 (37%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
++G L++R +L P + + Y+++ T H N L PL+L
Sbjct: 65 LLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLML 123
Query: 195 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 374
G+ D+AFPR+ + + G Y PL+S G ++D+
Sbjct: 124 GSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYG 183
Query: 375 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 488
+ L GIS+ S D+LP+ V
Sbjct: 184 LGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIV 221
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 37.9 bits (84), Expect = 0.14
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 87 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 266
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 267 XXXXXIVENGAGTG*TVYPPLS 332
G G T YP L+
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 37.5 bits (83), Expect = 0.18
Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 4/164 (2%)
Frame = +3
Query: 30 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 209
LR ++ + G L + + Y +VT H N L+PL +GA D+
Sbjct: 83 LRPILGGWITEAGKL--EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDM 140
Query: 210 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG-*TVYPPLSS---NIAHRGRSVDLAIF 377
A +N + + +E G +G +YPPLS+ ++ G + + +
Sbjct: 141 ASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLI 200
Query: 378 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
S+ L IS SF +LPL + A ITA
Sbjct: 201 SMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITA 244
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 37.1 bits (82), Expect = 0.24
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 194
++G ++R +L PG + + +N + T HA N +PL++
Sbjct: 45 LVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMI 103
Query: 195 GAPDIAFPRIN 227
GA D+AFPR+N
Sbjct: 104 GARDVAFPRLN 114
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 36.7 bits (81), Expect = 0.32
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Frame = +3
Query: 177 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 353
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 354 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 497
D A ++ L GI + LPLFV AV
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAV 218
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 36.3 bits (80), Expect = 0.43
Identities = 37/166 (22%), Positives = 58/166 (34%), Gaps = 1/166 (0%)
Frame = +3
Query: 15 IIGTSLRLLIRAELGNP-GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 191
I+ L L++R +L P L+G D YN I T H L+P +
Sbjct: 55 ILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQM 112
Query: 192 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 371
L A D+ FPR++ + G +YPPL+ G + D
Sbjct: 113 LAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFW 172
Query: 372 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 509
+ + IS+ S ++P+F A+ I A
Sbjct: 173 LLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFA 218
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 35.5 bits (78), Expect = 0.74
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIV 107
SG+ GT++ L+IR EL PGS L G+ Q++N +V
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1;
Pichia guilliermondii|Rep: Cytochrome c oxidase subunit
1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 168
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAEL--GNPGSLIGDDQIYNTIVTAHA 119
+ ++GT + ++IR EL GN G++Q YN ++T HA
Sbjct: 3 ASMVGTGMSVIIRMELSSGNSQFFHGNNQAYNVLITGHA 41
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.5 bits (73), Expect = 3.0
Identities = 27/125 (21%), Positives = 48/125 (38%)
Frame = +3
Query: 30 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 209
L +L+R +L PG+ +N T H L+P +LGA D+
Sbjct: 78 LAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFLFAVPMFEAISII-LLPALLGARDL 136
Query: 210 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 389
FPR++ + + + +G +YPPL++ G D+ + L
Sbjct: 137 PFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSF 194
Query: 390 AGISS 404
++S
Sbjct: 195 IEVAS 199
>UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=1;
Saccharomyces cerevisiae|Rep: Putative COX1/OXI3 intron
1 protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 834
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTA 113
SG+ GT++ L+IR EL PGS L G+ Q++N T+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNGAPTS 61
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 33.1 bits (72), Expect = 4.0
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +3
Query: 57 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 236
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 237 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 335
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 98
+G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 9 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 98
+G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 6.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 248 TPLPYIINFKKNCRKWCRN 304
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 32.3 bits (70), Expect = 6.9
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 171 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 347
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 348 RGRSVDLAIFSLHLAGISS 404
G +L +L L+G+SS
Sbjct: 139 YGLGTNLIQIALILSGLSS 157
>UniRef50_Q0BZ17 Cluster: Amidohydrolase family/endoribonuclease
L-PSP; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Amidohydrolase family/endoribonuclease L-PSP -
Hyphomonas neptunium (strain ATCC 15444)
Length = 755
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -2
Query: 313 VHPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISG-APSIRG 182
+H AP+S + + + ++R+G S ++ + GN I+G AP + G
Sbjct: 164 LHRYGAPYSILNVRVLDVRDGSLSAPSVVTVSGNVITGVAPYVEG 208
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,467,589
Number of Sequences: 1657284
Number of extensions: 5495160
Number of successful extensions: 9833
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 9536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9733
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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