Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306G06f
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.67 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.67 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.67 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.67 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   1.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   4.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.3  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 224 SCLYAPPPFFRLSLKRTIYSF 162
           SCLY PP  F+ + K  I  F
Sbjct: 115 SCLYVPPGIFKSTCKMDITWF 135


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 224 SCLYAPPPFFRLSLKRTIYSF 162
           SCLY PP  F+ + K  I  F
Sbjct: 115 SCLYVPPGIFKSTCKMDITWF 135


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 224 SCLYAPPPFFRLSLKRTIYSF 162
           SCLY PP  F+ + K  I  F
Sbjct: 115 SCLYVPPGIFKSTCKMDITWF 135


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 224 SCLYAPPPFFRLSLKRTIYSF 162
           SCLY PP  F+ + K  I  F
Sbjct: 115 SCLYVPPGIFKSTCKMDITWF 135


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 224 SCLYAPPPFFRLSLKRTIYSF 162
           SCLY PP  F+ + K  I  F
Sbjct: 115 SCLYVPPGIFKSTCKIDITWF 135


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 449 VFLFLYVSLILQAWLQEQHNLDDR 378
           V +F Y S+ ++ W   + +L  R
Sbjct: 218 VLIFTYTSICIEIWQSSESSLRPR 241


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -3

Query: 418 CKPGCKNSIIWMIGSHCSSCLC 353
           CK G K     +  SHC    C
Sbjct: 132 CKNGWKGKTCSLKDSHCDHTTC 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,622
Number of Sequences: 336
Number of extensions: 2533
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)