Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306G06f
(504 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59617-1|CAA42180.1| 792|Homo sapiens large subunit ribonucleot... 180 2e-45
X59543-1|CAA42118.1| 792|Homo sapiens M1 subunit of ribonucleot... 180 2e-45
BC006498-1|AAH06498.1| 792|Homo sapiens ribonucleotide reductas... 180 2e-45
AK222786-1|BAD96506.1| 792|Homo sapiens ribonucleoside-diphosph... 180 2e-45
AF107045-1|AAD37491.1| 792|Homo sapiens ribonucleotide reductas... 179 6e-45
BC007534-1|AAH07534.1| 433|Homo sapiens ring finger protein 26 ... 31 3.0
BC000058-1|AAH00058.1| 433|Homo sapiens ring finger protein 26 ... 31 3.0
AK075379-1|BAC11580.1| 433|Homo sapiens protein ( Homo sapiens ... 31 3.0
AB055622-1|BAB40955.1| 433|Homo sapiens RING finger protein wit... 31 3.0
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 30 4.0
AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer kerat... 30 4.0
AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated prot... 30 4.0
AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated prot... 29 7.0
AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated prot... 29 7.0
>X59617-1|CAA42180.1| 792|Homo sapiens large subunit ribonucleotide
reductase protein.
Length = 792
Score = 180 bits (439), Expect = 2e-45
Identities = 82/108 (75%), Positives = 96/108 (88%)
Frame = +2
Query: 173 LYVLKRGGRMEEVHIDKITSRIKKLCYGLNMDFVDPVCITLKVINGMYSGVTTVELDNLA 352
++V+KR GR E V DKITSRI+KLCYGLNMDFVDP IT+KVI G+YSGVTTVELD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 353 AETAATMTTDHPDYAVLAARLAISNLHKETKKHFSDVMKDLFDIVNPH 496
AETAAT+TT HPDYA+LAAR+A+SNLHKETKK FSDVM+DL++ +NPH
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPH 108
>X59543-1|CAA42118.1| 792|Homo sapiens M1 subunit of ribonucleotide
reductase protein.
Length = 792
Score = 180 bits (439), Expect = 2e-45
Identities = 82/108 (75%), Positives = 96/108 (88%)
Frame = +2
Query: 173 LYVLKRGGRMEEVHIDKITSRIKKLCYGLNMDFVDPVCITLKVINGMYSGVTTVELDNLA 352
++V+KR GR E V DKITSRI+KLCYGLNMDFVDP IT+KVI G+YSGVTTVELD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 353 AETAATMTTDHPDYAVLAARLAISNLHKETKKHFSDVMKDLFDIVNPH 496
AETAAT+TT HPDYA+LAAR+A+SNLHKETKK FSDVM+DL++ +NPH
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPH 108
>BC006498-1|AAH06498.1| 792|Homo sapiens ribonucleotide reductase
M1 polypeptide protein.
Length = 792
Score = 180 bits (439), Expect = 2e-45
Identities = 82/108 (75%), Positives = 96/108 (88%)
Frame = +2
Query: 173 LYVLKRGGRMEEVHIDKITSRIKKLCYGLNMDFVDPVCITLKVINGMYSGVTTVELDNLA 352
++V+KR GR E V DKITSRI+KLCYGLNMDFVDP IT+KVI G+YSGVTTVELD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 353 AETAATMTTDHPDYAVLAARLAISNLHKETKKHFSDVMKDLFDIVNPH 496
AETAAT+TT HPDYA+LAAR+A+SNLHKETKK FSDVM+DL++ +NPH
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPH 108
>AK222786-1|BAD96506.1| 792|Homo sapiens ribonucleoside-diphosphate
reductase M1 chain variant protein.
Length = 792
Score = 180 bits (439), Expect = 2e-45
Identities = 82/108 (75%), Positives = 96/108 (88%)
Frame = +2
Query: 173 LYVLKRGGRMEEVHIDKITSRIKKLCYGLNMDFVDPVCITLKVINGMYSGVTTVELDNLA 352
++V+KR GR E V DKITSRI+KLCYGLNMDFVDP IT+KVI G+YSGVTTVELD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 353 AETAATMTTDHPDYAVLAARLAISNLHKETKKHFSDVMKDLFDIVNPH 496
AETAAT+TT HPDYA+LAAR+A+SNLHKETKK FSDVM+DL++ +NPH
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPH 108
>AF107045-1|AAD37491.1| 792|Homo sapiens ribonucleotide reductase
M1 subunit protein.
Length = 792
Score = 179 bits (435), Expect = 6e-45
Identities = 81/108 (75%), Positives = 96/108 (88%)
Frame = +2
Query: 173 LYVLKRGGRMEEVHIDKITSRIKKLCYGLNMDFVDPVCITLKVINGMYSGVTTVELDNLA 352
++V+K+ GR E V DKITSRI+KLCYGLNMDFVDP IT+KVI G+YSGVTTVELD LA
Sbjct: 1 MHVIKQDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 353 AETAATMTTDHPDYAVLAARLAISNLHKETKKHFSDVMKDLFDIVNPH 496
AETAAT+TT HPDYA+LAAR+A+SNLHKETKK FSDVM+DL++ +NPH
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPH 108
>BC007534-1|AAH07534.1| 433|Homo sapiens ring finger protein 26
protein.
Length = 433
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 347 LAAETAATMTTDHPDYAVLAARLAISNLHKETKKH--FSDVMK 469
LA A T+T HPD+ + A A+S LH H DVM+
Sbjct: 234 LACVLAVTVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMR 276
>BC000058-1|AAH00058.1| 433|Homo sapiens ring finger protein 26
protein.
Length = 433
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 347 LAAETAATMTTDHPDYAVLAARLAISNLHKETKKH--FSDVMK 469
LA A T+T HPD+ + A A+S LH H DVM+
Sbjct: 234 LACVLAVTVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMR 276
>AK075379-1|BAC11580.1| 433|Homo sapiens protein ( Homo sapiens
cDNA PSEC0069 fis, clone NT2RP2001341, highly similar to
RING finger protein 26. ).
Length = 433
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 347 LAAETAATMTTDHPDYAVLAARLAISNLHKETKKH--FSDVMK 469
LA A T+T HPD+ + A A+S LH H DVM+
Sbjct: 234 LACVLAVTVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMR 276
>AB055622-1|BAB40955.1| 433|Homo sapiens RING finger protein with
leucine zipper RNF26 protein.
Length = 433
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 347 LAAETAATMTTDHPDYAVLAARLAISNLHKETKKH--FSDVMK 469
LA A T+T HPD+ + A A+S LH H DVM+
Sbjct: 234 LACVLAVTVTVLHPDFTLRLATQALSQLHARPSYHRLREDVMR 276
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +1
Query: 334 GTG*SCCRDSCYNDYRSSRLC---CSCSQAC 417
G G SCC+ SC S C CSCS C
Sbjct: 99 GCGSSCCQSSCCKPCCSQSSCCKPCSCSSGC 129
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +1
Query: 322 SDNCGTG*SCCRDSCYNDYRSSRLCCS---CSQAC 417
S + G G SCC+ SC S CC CS C
Sbjct: 124 SCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGC 158
>AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer keratin
protein.
Length = 194
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +1
Query: 334 GTG*SCCRDSCYNDYRSSRLC---CSCSQAC 417
G G SCC+ SC S C CSCS C
Sbjct: 106 GCGSSCCQSSCCKPCCSQSSCCKPCSCSSGC 136
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +1
Query: 322 SDNCGTG*SCCRDSCYNDYRSSRLCCS---CSQAC 417
S + G G SCC+ SC S CC CS C
Sbjct: 131 SCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGC 165
>AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated protein
protein.
Length = 187
Score = 30.3 bits (65), Expect = 4.0
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +1
Query: 334 GTG*SCCRDSCYNDYRSSRLC---CSCSQAC 417
G G SCC+ SC S C CSCS C
Sbjct: 99 GCGSSCCQSSCCKPCCSQSSCCKPCSCSSGC 129
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +1
Query: 322 SDNCGTG*SCCRDSCYNDYRSSRLCCS---CSQAC 417
S + G G SCC+ SC S CC CS C
Sbjct: 124 SCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGC 158
>AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated protein
5-11 protein.
Length = 221
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = +1
Query: 334 GTG*SCCRDSCYNDYRSSRLC---CSCSQAC 417
G G SCC+ SC Y C CSC C
Sbjct: 162 GCGSSCCQSSCCKPYCCQSSCCKPCSCFSGC 192
>AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 29.5 bits (63), Expect = 7.0
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = +1
Query: 334 GTG*SCCRDSCYNDYRSSRLC---CSCSQAC 417
G G SCC+ SC Y C CSC C
Sbjct: 162 GCGSSCCQSSCCKPYCCQSSCCKPCSCFSGC 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,771,727
Number of Sequences: 237096
Number of extensions: 1363509
Number of successful extensions: 2689
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2676
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -