Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306G04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...   193   7e-50
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...   180   6e-46
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...   180   6e-46
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    29   2.0  
Z81496-7|CAB04073.1|  301|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z66562-5|CAA91466.1|  250|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL033510-9|CAL49451.1|  291|Caenorhabditis elegans Hypothetical ...    27   8.1  
AL033510-8|CAA22061.1|  291|Caenorhabditis elegans Hypothetical ...    27   8.1  
AB107358-1|BAD89379.1|  250|Caenorhabditis elegans troponin I 1 ...    27   8.1  

>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score =  193 bits (470), Expect = 7e-50
 Identities = 85/139 (61%), Positives = 113/139 (81%)
 Frame = +3

Query: 105 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 284
           K  D+LSTAIL+ K +PNRLIV+++  DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE
Sbjct: 13  KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72

Query: 285 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 464
           +V I++SD++CP+EK+RM             DVVSI P P++ YG R+H+LPIDD++EGL
Sbjct: 73  SVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGL 132

Query: 465 TGNLFEVYLKPYFMEAYRP 521
           TGNLF+V+LKPYF+EAYRP
Sbjct: 133 TGNLFDVFLKPYFLEAYRP 151


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  180 bits (438), Expect = 6e-46
 Identities = 83/139 (59%), Positives = 112/139 (80%)
 Frame = +3

Query: 105 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 284
           K  D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13  KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72

Query: 285 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 464
           TV IVL+ DNCP++KI+M             DVVSI+    ++YGKRVH+LPIDD++EGL
Sbjct: 73  TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGL 131

Query: 465 TGNLFEVYLKPYFMEAYRP 521
           TGNLF+V+L+PYF +AYRP
Sbjct: 132 TGNLFDVFLRPYFTDAYRP 150


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  180 bits (438), Expect = 6e-46
 Identities = 83/139 (59%), Positives = 112/139 (80%)
 Frame = +3

Query: 105 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKE 284
           K  D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+E
Sbjct: 13  KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72

Query: 285 TVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGL 464
           TV IVL+ DNCP++KI+M             DVVSI+    ++YGKRVH+LPIDD++EGL
Sbjct: 73  TVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGL 131

Query: 465 TGNLFEVYLKPYFMEAYRP 521
           TGNLF+V+L+PYF +AYRP
Sbjct: 132 TGNLFDVFLRPYFTDAYRP 150


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
           protein C10C6.1 protein.
          Length = 1565

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +1

Query: 94  WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSKAN 273
           W    +  + R RSS+  +DP +S S   S  T+ S      K S    S  + S +  +
Sbjct: 56  WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115

Query: 274 AARKPFASCSQMIIALMR 327
            A +P    S   + L R
Sbjct: 116 PANRPSLHSSTSPVTLQR 133


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
           protein.
          Length = 1565

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +1

Query: 94  WQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMTTQSWHFHRPKWSNFNSSVVTQSCSKAN 273
           W    +  + R RSS+  +DP +S S   S  T+ S      K S    S  + S +  +
Sbjct: 56  WTSASMTNLCRVRSSLGHSDPQLSSSSTNSFNTSTSSLHPATKSSTTALSSFSTSSANRS 115

Query: 274 AARKPFASCSQMIIALMR 327
            A +P    S   + L R
Sbjct: 116 PANRPSLHSSTSPVTLQR 133


>Z81496-7|CAB04073.1|  301|Caenorhabditis elegans Hypothetical
           protein F09C6.6 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +1

Query: 79  INFEKWQIIKVLMIYRPRSSVARTDPTVSLSKKQSAMTTQSWHFHRPKWSN 231
           I F+KW +I++  +++P  +       +  S      T +   +H   WSN
Sbjct: 243 IEFDKWNLIEIAKVFKPDYAGGNVF-KIKYSNNDYTFTIKCKPWHGMAWSN 292


>Z81581-6|CAB04666.1|  679|Caenorhabditis elegans Hypothetical
           protein T02E1.3b protein.
          Length = 679

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 46  YKNYNSS*ILTINFEKWQIIKVLMIYRPRSSVARTDPTVSLSK 174
           +K  NSS  L+   E+W  + +  +  P SS A  D   SLSK
Sbjct: 146 FKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAISSLSK 188


>Z81581-5|CAB04667.2|  646|Caenorhabditis elegans Hypothetical
           protein T02E1.3a protein.
          Length = 646

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 46  YKNYNSS*ILTINFEKWQIIKVLMIYRPRSSVARTDPTVSLSK 174
           +K  NSS  L+   E+W  + +  +  P SS A  D   SLSK
Sbjct: 113 FKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAISSLSK 155


>Z70783-11|CAA94860.2|  782|Caenorhabditis elegans Hypothetical
           protein ZK856.12 protein.
          Length = 782

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 174 EAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDD---NCPD 323
           +++SDD    A +     + ++  G   + K K  K   CI+LS+D   N PD
Sbjct: 120 KSLSDDMERAAATFRNPHESEIVPGAMYIFKQKHGKAYRCIILSEDGDMNIPD 172


>Z66562-5|CAA91466.1|  250|Caenorhabditis elegans Hypothetical
           protein F42E11.4 protein.
          Length = 250

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +3

Query: 69  DSNNKF*KMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 233
           +   K  K+  NK+ +DL T  LR++    +++ E  V+  N       AK+E +
Sbjct: 56  ERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110


>AL033510-9|CAL49451.1|  291|Caenorhabditis elegans Hypothetical
           protein Y40H7A.4b protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 69  DSNNKF*KMADNKSP-DDLSTAILRRKDRPNRLIVEEAVSDDN 194
           D+N    ++ D+ SP  +L  A L   D+  R I+E AV +DN
Sbjct: 43  DTNYPNHQLLDSDSPIRELRRAALLSADQVQREIIENAVGEDN 85


>AL033510-8|CAA22061.1|  291|Caenorhabditis elegans Hypothetical
           protein Y40H7A.4a protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 69  DSNNKF*KMADNKSP-DDLSTAILRRKDRPNRLIVEEAVSDDN 194
           D+N    ++ D+ SP  +L  A L   D+  R I+E AV +DN
Sbjct: 43  DTNYPNHQLLDSDSPIRELRRAALLSADQVQREIIENAVGEDN 85


>AB107358-1|BAD89379.1|  250|Caenorhabditis elegans troponin I 1
           protein.
          Length = 250

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +3

Query: 69  DSNNKF*KMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 233
           +   K  K+  NK+ +DL T  LR++    +++ E  V+  N       AK+E +
Sbjct: 56  ERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,130,233
Number of Sequences: 27780
Number of extensions: 242968
Number of successful extensions: 568
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)