Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306G03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 42 3e-04
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 42 3e-04
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3) 40 0.001
SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031) 38 0.005
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 36 0.027
SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74) 34 0.062
SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2) 33 0.14
SB_7650| Best HMM Match : SLR1-BP (HMM E-Value=0.71) 33 0.19
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 31 0.44
SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1) 31 0.44
SB_33149| Best HMM Match : DSL (HMM E-Value=5.60519e-45) 31 0.44
SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 31 0.44
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 28 0.56
SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19) 30 1.0
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_12699| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05) 30 1.0
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 30 1.0
SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05) 30 1.0
SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1) 30 1.0
SB_49425| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 30 1.3
SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09) 30 1.3
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 30 1.3
SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 29 2.3
SB_13393| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 29 2.3
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 29 3.1
SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39) 29 3.1
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 29 3.1
SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24) 29 3.1
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_41973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19) 28 4.1
SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_59233| Best HMM Match : Involucrin (HMM E-Value=2.5) 28 5.4
SB_38826| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.4
SB_44426| Best HMM Match : Lectin_legB (HMM E-Value=4.8) 28 5.4
SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23) 28 5.4
SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04) 28 5.4
SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 27 7.1
SB_59375| Best HMM Match : TPR_2 (HMM E-Value=7.3e-06) 27 7.1
SB_41325| Best HMM Match : SWIM (HMM E-Value=0.015) 27 7.1
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 27 7.1
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 27 9.4
SB_44587| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0) 27 9.4
SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42) 27 9.4
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 27 9.4
SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14) 27 9.4
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 27 9.4
SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 9.4
SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42) 27 9.4
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 27 9.4
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 41.9 bits (94), Expect = 3e-04
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRC----TFCCSNRCGT-SC---CPSSGILCCFA-ILCWCCSN 398
SCR CC+ YSC + C CCS R SC C S + CC ++C+ C
Sbjct: 145 SCRVACCSCRVVCYSCRVACCSCRVACCSCRVVCYSCRVVCYSCRVACCSCRVVCYSCRV 204
Query: 399 PASGSLHSPCSC---CICCRLPIWS 464
+ CSC C CR+ +S
Sbjct: 205 VFCSCRVACCSCRVVCYSCRVVCYS 229
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTL---RC-TFCCSNR-----CGTSCCPSSGILCCFAILCWCCSN 398
SCR CC+ YSC + C CCS R C +CC C ++C+ C
Sbjct: 124 SCRIACCSCRVVCYSCRVVFCSCRVACCSCRVVCYSCRVACCSCRVACCSCRVVCYSCRV 183
Query: 399 PASGSLHSPCSCCICC 446
+ CSC + C
Sbjct: 184 VCYSCRVACCSCRVVC 199
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSC---CPSSGILCCFA-ILCWCC 392
SCR CC+ YSC + C C + +SC C S + CC ++C+ C
Sbjct: 243 SCRVACCSCRVVCYSCRVACCSCRVHMKCSSCRVVCSSCRVACCSCRVVCYSC 295
Score = 37.5 bits (83), Expect = 0.007
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 425
SCR CC+ YSC R FC C +CC + ++C+ C A S
Sbjct: 187 SCRVACCSCRVVCYSC--RVVFC---SCRVACCSCRVVCYSCRVVCYSC-RVACCSCRVV 240
Query: 426 C-SC---CICCRLPIWS 464
C SC C CR+ +S
Sbjct: 241 CYSCRVACCSCRVVCYS 257
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 425
SCR CC+ YSC + C CS R C + C + C C S +
Sbjct: 229 SCRVACCSCRVVCYSCRVAC---CSCRVVCYSCRVACCSCRVHMKCSSCRVVCSSCRVAC 285
Query: 426 CSCCICC 446
CSC + C
Sbjct: 286 CSCRVVC 292
Score = 32.3 bits (70), Expect = 0.25
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +3
Query: 273 ICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCICC 446
+C +Y+ + CCS C +CC S ++CC + C A L P CC
Sbjct: 363 LCVAYAVVV----CCS--CRVACC-SCRVVCCSCRVVCCSCRVAHAVLRVPHGAVACC 413
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSC--CPSSGILCC 368
SCR CC+ C C+ R CCS R + P + CC
Sbjct: 374 SCRVACCS--CRVVCCSCR-VVCCSCRVAHAVLRVPHGAVACC 413
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Frame = +3
Query: 249 CRSPCCNS---ICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLH 419
CR CC + + C C +RC CC RC +CC + CC CC
Sbjct: 22 CRVMCCVACFVMHCVACCVMRCVACCVMRC-VACCVMRCVACCVMHCVACCVMRCVACRV 80
Query: 420 SPC-SC----CICCRL 452
C +C C+ CR+
Sbjct: 81 MRCVACRVMRCVACRV 96
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +3
Query: 243 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHS 422
R R C +CC + C CC RC +CC + CC CC
Sbjct: 87 RVMRCVACRVMCCVACFVMHCVACCVMRC-VACCVMRCVACCVMRCVGCCVMRCVACRVM 145
Query: 423 PC-SCCI 440
C +CC+
Sbjct: 146 RCVACCV 152
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +3
Query: 243 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHS 422
R R C +CC + C CC RC +CC + CC CC +H
Sbjct: 15 RVMRCVGCRVMCCVACFVMHCVACCVMRC-VACCVMRCVACCVMRCVACC------VMHC 67
Query: 423 PCSC---CICCRL 452
C C+ CR+
Sbjct: 68 VACCVMRCVACRV 80
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 276 CCSYSCT----LRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC C +RC CC RC +CC + CC ++ +CC
Sbjct: 134 CCVMRCVACRVMRCVACCVMRC-VACCVMRCVDCC--VVTFCC 173
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 261 CCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC C C +RC C RC +CC + CC CC
Sbjct: 126 CCVMRCVG-CCVMRCVACRVMRC-VACCVMRCVACCVMRCVDCC 167
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 252 RSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCF 371
R C + C C +RC CC RC CC + CC+
Sbjct: 138 RCVACRVMRCVACCVMRCVACCVMRC-VDCCVVT--FCCY 174
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +3
Query: 276 CCSYSC----TLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCIC 443
CC C +RC CC C +CC + C + C C + CC+
Sbjct: 46 CCVMRCVACCVMRCVACCVMHC-VACCVMR-CVACRVMRCVACR--VMRCVACRVMCCVA 101
Query: 444 C 446
C
Sbjct: 102 C 102
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 246 SCRSPCCNSIC---CSYSCTLRCTFCCSNRCGTSCCPSSG 356
+CR C + C C C +RC CC T CC SG
Sbjct: 141 ACRVMRCVACCVMRCVACCVMRCVDCC---VVTFCCYPSG 177
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 40.7 bits (91), Expect = 7e-04
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWC---CSNPASGSL 416
SC S CC ++ C C SC P I CC L C CS G+
Sbjct: 1323 SCPSECCLTVLTPLKENKSHQEGCPAVCSESCKPDCPIKCCSNALSSCPQSCSGDHCGA- 1381
Query: 417 HSPCSCCICCRLPIWSSTSSTFPYGFAPAFCSID 518
P CC+ SST+S P +P+ C+ D
Sbjct: 1382 ECPTQCCLLADNGQHSSTASC-PSACSPSGCNPD 1414
Score = 35.1 bits (77), Expect = 0.035
Identities = 28/91 (30%), Positives = 37/91 (40%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 425
SC S CC +I S + +F C +C TSC P + CC S + S
Sbjct: 1589 SCPSICCITIRGSAKEEQQNSFECPVKCLTSCEPECPVRCCSG--SQTLDLGVSKTCPSW 1646
Query: 426 CSCCICCRLPIWSSTSSTFPYGFAPAFCSID 518
CS C+ + +T P PA CS D
Sbjct: 1647 CSVS-SCKPDCPARCCTTEPLSACPATCSPD 1676
Score = 34.3 bits (75), Expect = 0.062
Identities = 21/87 (24%), Positives = 30/87 (34%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC 428
C S CC +I T C + C SC P+ I CC A C + S C
Sbjct: 1471 CPSKCCLTILEPLQEGPNATAYCPSDCFESCKPNCPIKCCPATAIKCPVGCSEHSCKPEC 1530
Query: 429 SCCICCRLPIWSSTSSTFPYGFAPAFC 509
C ++ ++ P +C
Sbjct: 1531 PSKCCMKVLPPTTLGQNTANSLCPVYC 1557
Score = 33.9 bits (74), Expect = 0.082
Identities = 19/87 (21%), Positives = 34/87 (39%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC 428
C + CC ++ + T C + C +C P + CC C P++ P
Sbjct: 1415 CPARCCITVLQPLNEKHNTTAECPSECSETCKPECPVKCCTG-ECPAGCLPSNCKPDCPS 1473
Query: 429 SCCICCRLPIWSSTSSTFPYGFAPAFC 509
CC+ P+ ++T + P+ C
Sbjct: 1474 KCCLTILEPLQEGPNAT---AYCPSDC 1497
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 243 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCC 344
RSC C CC C + C C C CC
Sbjct: 1180 RSCEEGCPEQ-CCQNGCPVECLSSCKPHCPPRCC 1212
Score = 32.3 bits (70), Expect = 0.25
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 180 IRCTS*YRQQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRCG-TSCCPSSG 356
+RC S Q ++ S T C C C + CT C C SC P
Sbjct: 1626 VRCCS--GSQTLDLGVSKTCPSWCSVSSCKPDCPARCCTTEPLSACPATCSPDSCRPECP 1683
Query: 357 ILCCFAILCWCCSNPASGSLHSPCSCC 437
++CC ++ CS + G+ P CC
Sbjct: 1684 LICC-SVCPPNCSAQSCGNF-CPPKCC 1708
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Frame = +3
Query: 270 SICCSYSCTLRCTF-CCSNRCG----TSCCPSSGILCCFAILCWCCSNPASGSLHSPCSC 434
SI C SC C CC N C +SC P CCF +L N S P C
Sbjct: 1175 SIMCKRSCEEGCPEQCCQNGCPVECLSSCKPHCPPRCCFTVLIPIADN-QSVKEKCPAVC 1233
Query: 435 CICCR 449
C+
Sbjct: 1234 KETCK 1238
Score = 31.9 bits (69), Expect = 0.33
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Frame = +3
Query: 240 LRSCRSPCC--NS--ICCSYSCTLRCT-----FCCSNRCGTSCCPSSGILCCFAILC--W 386
L SC S CC NS + C SC CT CC N + CP+ C + C
Sbjct: 1782 LPSCPSTCCIKNSPPVVCPKSCETTCTPDCPVMCCKNSSPATECPTICASKCIS-KCPEK 1840
Query: 387 CCSNP 401
CC P
Sbjct: 1841 CCKQP 1845
Score = 31.5 bits (68), Expect = 0.44
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 10/99 (10%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPA----SGSL 416
C C S C C ++C S+ C C P + C +I C A S
Sbjct: 1553 CPVYCLTS--CKPDCPIKCCTKLSSSCPADCSPQNCKSSCPSICCITIRGSAKEEQQNSF 1610
Query: 417 HSPCSCCICC--RLPI-WSSTSSTFPYGFA---PAFCSI 515
P C C P+ S S T G + P++CS+
Sbjct: 1611 ECPVKCLTSCEPECPVRCCSGSQTLDLGVSKTCPSWCSV 1649
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +3
Query: 264 CNSIC---CSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAIL 380
C C C SC L+ C C C P CCFA+L
Sbjct: 1233 CKETCKPECPLSCCLKDARGCPATCVEDCKPGCPPECCFAVL 1274
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/90 (24%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC 428
C CC ++ + C C TSC PS + CC C ++ + C
Sbjct: 1265 CPPECCFAVLKPIQENREHSQSCPKICFTSCKPSCPVHCCSEHSNACPQECSTDNCKPSC 1324
Query: 429 --SCCICCRLPIWSSTSSTFPYGFAPAFCS 512
CC+ P+ + S PA CS
Sbjct: 1325 PSECCLTVLTPLKENKSH---QEGCPAVCS 1351
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC 428
C CC S S T C C +C P + CC ++ SN A + HS C
Sbjct: 2193 CPVKCCESSTAP-STKEYSTDECPEICSHNCLPFCPVKCCAVVV---PSNQAEAT-HSSC 2247
Query: 429 -SCCICCRLPIWSS---TSST 479
S C LP S TSST
Sbjct: 2248 PSVCSTTCLPFCPSKCCTSST 2268
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/62 (25%), Positives = 23/62 (37%)
Frame = +3
Query: 288 SCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCICCRLPIWSS 467
+C++ C C C CC + C + C P H P CC +PI +
Sbjct: 1173 TCSIMCKRSCEEGCPEQCCQNG---C--PVECLSSCKP-----HCPPRCCFTVLIPIADN 1222
Query: 468 TS 473
S
Sbjct: 1223 QS 1224
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCT--FCCSNRCGTSCCPSSGILCC 368
C CC+++ S + + C + C SC P I CC
Sbjct: 2082 CPVKCCSALAKQVSILVHNSRKLICPSHCEKSCEPDCPIRCC 2123
>SB_59684| Best HMM Match : C1_3 (HMM E-Value=8.3)
Length = 138
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +3
Query: 243 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHS 422
R R C +CC + C CC RC +CC + CC CC
Sbjct: 7 RVMRCVGCRVMCCVACFVMHCVACCVMRC-VACCVMRCVACCVMRCVGCCVMRCVACRVM 65
Query: 423 PC-SCCI 440
C +CC+
Sbjct: 66 RCVACCV 72
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = +3
Query: 276 CCSYSCT----LRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC C +RC CC RC +CC + CC ++ +CC
Sbjct: 54 CCVMRCVACRVMRCVACCVMRC-VACCVMRCVDCC--VVTFCC 93
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +3
Query: 261 CCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC C C +RC C RC +CC + CC CC
Sbjct: 46 CCVMRCVG-CCVMRCVACRVMRC-VACCVMRCVACCVMRCVDCC 87
Score = 33.9 bits (74), Expect = 0.082
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 252 RSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCF 371
R C + C C +RC CC RC CC + CC+
Sbjct: 58 RCVACRVMRCVACCVMRCVACCVMRC-VDCCVVT--FCCY 94
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +3
Query: 246 SCRSPCCNSIC---CSYSCTLRCTFCCSNRCGTSCCPSSG 356
+CR C + C C C +RC CC T CC SG
Sbjct: 61 ACRVMRCVACCVMRCVACCVMRCVDCC---VVTFCCYPSG 97
>SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031)
Length = 563
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Frame = +3
Query: 249 CRSPCCNSICCSYSC---TLRCTFCCSNRCGTSCCPSSGILCCFAILC---WCCSNPASG 410
C PCC +CC+ SC R CC+ C C + + C A+LC C +
Sbjct: 352 CVVPCCVVLCCAVSCRAVLCRAVSCCAVLCRAVLCRA---VSCRAVLCRAVLCLAVLCRV 408
Query: 411 SLHSPCSCCI--CC 446
L SCC CC
Sbjct: 409 VLCRAVSCCTVWCC 422
Score = 35.1 bits (77), Expect = 0.035
Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 6/97 (6%)
Frame = +3
Query: 201 RQQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSG---ILCCF 371
R G + D + G S + + C LR CC C C + +LCC
Sbjct: 294 RLAGDDGCDRNRGFYYFTSELSSQLLCFTVLALRVVTCCVVLCCAVLCRAVSCRVVLCCV 353
Query: 372 AILC--WCCSNPASGSLHSPCSCC-ICCRLPIWSSTS 473
C CC+ L SCC + CR + + S
Sbjct: 354 VPCCVVLCCAVSCRAVLCRAVSCCAVLCRAVLCRAVS 390
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +3
Query: 249 CRSPCCNSICC-SYSCTLRC--TFCCSNRCGTSCCPSSGILCCFAILC 383
C PCC +CC C + C C C + C + CC A+ C
Sbjct: 462 CVVPCCVVLCCVVLYCVVLCRVVLCRDVLCRAALCRVVQLSCC-AVSC 508
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 35.5 bits (78), Expect = 0.027
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = -3
Query: 423 ESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRS 244
E W+DWS +V S C S S + G S S+ SC+ GY +
Sbjct: 205 EKFNFHWEDWSFRDVV-PSERNCAGNSSAPTPCVAGSANSNTGSSDSSACVSCSAGYNAT 263
Query: 243 EG----RCCYQRTQCPAGDINLCS 184
EG C +C G +LC+
Sbjct: 264 EGSTACSACPAGYECSVGTASLCT 287
>SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74)
Length = 328
Score = 34.3 bits (75), Expect = 0.062
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +3
Query: 252 RSPCCNSICCSYSCTLRCTFCCSNRCGTSC-----CPSSGILCC-FAILCWCCS 395
R+ C ++CC +C RC+ C C +C C LCC F LC CS
Sbjct: 217 RADCYVNLCCCVTC--RCSVCTCCPCDCTCLQCAPCIVFSALCCPFWSLCLLCS 268
>SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 252 RSPCCNSICCSYSCTLRCTFCCSNRCG-TSCCPS---SGILCCFAILCWCCS 395
R+ C ++CC +C CC C C P S + C F LC CS
Sbjct: 217 RADCYVNLCCCVTCRCSVCTCCPCDCPCLQCAPCIVFSALCCPFWSLCLLCS 268
>SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2)
Length = 369
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +3
Query: 303 CTFCCSNRC--GTSCCPSSGILCCFAILCWCCSNPASGS 413
C F C +C GT C ++ C LC C NP S +
Sbjct: 2 CIFNCIGKCIGGTCKCVGKSLMACLRGLCKCFCNPVSAA 40
>SB_7650| Best HMM Match : SLR1-BP (HMM E-Value=0.71)
Length = 439
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = -3
Query: 429 SRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYR--SSKWS--CN 262
+ + V +R Q +V ++I +GS S +R C +R +SK + CN
Sbjct: 21 TEQVVSARHQGGDDLVLVAHNTILLLVFGSLVIIGLGSERRACADCLHRCGTSKDASICN 80
Query: 261 RG--YGRSEGRCC 229
RG YGR+ GRCC
Sbjct: 81 RGIGYGRTRGRCC 93
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 31.5 bits (68), Expect = 0.44
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 6/106 (5%)
Frame = -3
Query: 345 GSKRCRTYWSSKRCSVGCSYRSSK---WSCNRGYGRSEGRCCYQRTQCPAGDINLCSVWR 175
G K C T W + C+ C+ R+ +SCN G + C+ CS++
Sbjct: 1094 GKKHCLTSWYGENCTAYCTPRNDSTGHFSCNETTGSKD---CHDGWYG-----GTCSIY- 1144
Query: 174 NVLRYSLSVSHVGWSNQRSSGYC---WNSCDCTRFSSNYKGSSDEY 46
L ++ S H C W +CT F S + S D Y
Sbjct: 1145 -CLPHNGSSGHYDCDASSGRKTCHVDWYGINCTVFCSKPRDSKDHY 1189
Score = 30.7 bits (66), Expect = 0.76
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 8/109 (7%)
Frame = -3
Query: 345 GSKRCRTYWSSKRCSVGCSYRSS---KWSCNRGYGRSEGRCCYQRTQCPA-GDINLCSVW 178
GSK C W + C+V C +SS +SC+ G + C L
Sbjct: 1026 GSKLCHPDWFGENCTVHCKAQSSDNQNYSCDNATGSKICHSNWYGENCTVYCKAQLSDHQ 1085
Query: 177 RNVLRYSLSVSH--VGWSNQRSSGYCWNSCDCT-RFSSN-YKGSSDEYD 43
+ + H W + + YC D T FS N GS D +D
Sbjct: 1086 HYICDNTTGKKHCLTSWYGENCTAYCTPRNDSTGHFSCNETTGSKDCHD 1134
Score = 27.9 bits (59), Expect = 5.4
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Frame = -3
Query: 345 GSKRCRTYWSSKRCSVGC---SYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLCSVWR 175
G K C W + C + C + S +SCN G + C DI
Sbjct: 435 GEKICHAGWYGRLCDIYCIPTNDSSGHYSCNATTGEKICHAGWYGNLC---DIYCIPTND 491
Query: 174 NVLRYSLS------VSHVGWSNQRSSGYCWNSCDCT-RFSSN 70
+ YS + V HVGW + YC + D + +S N
Sbjct: 492 SSGHYSCNATTGEKVCHVGWHGKLCDTYCIPTIDSSGHYSCN 533
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 3/86 (3%)
Frame = -3
Query: 354 RYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLCSVWR 175
R G K C W C++ C +SCN G + C I+
Sbjct: 265 RTTGEKICLKSWFGTLCTIYCDESKGNYSCNATTGEKICHAGWYGNLCDTYCISTNDSSG 324
Query: 174 NVLRYSLS---VSHVGWSNQRSSGYC 106
+ + + + H GW + YC
Sbjct: 325 HYTCNATTGEKICHAGWYGRLCDTYC 350
>SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1)
Length = 890
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 252 RSPCCNSICCSYSCTL-RCTFCCSNRCGTSCCPSSGILCCFAILCWCCS 395
+S S CC +CT +C CS+R T ++ I C ++L C S
Sbjct: 559 KSRLLTSACCCKTCTRPKCAIHCSSRRQTKTSGNTKICACPSLLLACTS 607
>SB_33149| Best HMM Match : DSL (HMM E-Value=5.60519e-45)
Length = 443
Score = 31.5 bits (68), Expect = 0.44
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = -3
Query: 357 CRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRS------EGRCCYQRTQCPAGDI 196
C G+++C+ +W ++C V C R +++C G G C T C A D
Sbjct: 234 CLANGTRKCQQHWYGQQCHVFCQPRPIQYTCQSTTGAKVCSQGWYGEDC--STFCKARDS 291
Query: 195 NLCSVWRNVLRYSLSVSHVGWSNQRSSGYC 106
+ + + R V H+ W YC
Sbjct: 292 DWFGHF-DCDRNGSRVCHMYWHGPECKAYC 320
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 345 GSKRCRTYWSSKRCSVGCSYRSSK---WSCNRGYGRSE 241
G K C W + C+V CS R+ ++CN G E
Sbjct: 174 GQKICYPGWYGRNCNVACSPRNDSTGHYNCNADTGAKE 211
>SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 345 GSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRSEGRCCYQRTQC 211
G K C W C V C+ SS ++CN+ G + T C
Sbjct: 694 GQKVCHRDWYGPFCDVNCNSNSSHFTCNKTTGARVCHSNWYGTYC 738
Score = 27.9 bits (59), Expect = 5.4
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Frame = -3
Query: 357 CRYWGSKRCRTYWSSKRCSVGCSYR---SSKWSCNRGYGRSEGRCCYQRTQCPAGDINLC 187
C GSK C W C V C R S +SCN G + C + GD C
Sbjct: 490 CSVNGSKVCHREWYGATCDVHCVPRNDSSGHFSCNTTSGE---KVCLRDWY---GD--RC 541
Query: 186 SVWRNVLRYSLSVSHVGWSNQRSSGYC---WNSCDCTRFSSNYKGSSDEY 46
++ L + S+ H N + C W CT F N K SS+ Y
Sbjct: 542 EIF--CLSRNDSLGHYS-CNANGTKVCHKDWYGDLCTTFCKN-KDSSEHY 587
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 306 TFCCSNRC-GTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCCICCRLPI 458
T CC R G +CCP +CC + CC N S L S R+PI
Sbjct: 562 TTCCKKRSGGYACCPIPKAVCC-SDEVHCCPNGYSCDLSSKKCVKGASRVPI 612
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 28.3 bits (60), Expect(2) = 0.56
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 282 SYSCTLRCTFCCSNRCGTSCCPSSGIL 362
+Y C C F C C +CC G++
Sbjct: 753 AYVCKEECKFSCDLDCPENCCGPEGLM 779
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFA 374
SC + CC + R ++C C +C PS G CC A
Sbjct: 591 SCGTGCCKEHDANLLKKGRPSYC-HEMCLANCVPSCGSGCCSA 632
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +3
Query: 267 NSICCSYSCTLRCTFCCSNRCGTSCC 344
N + +C C C CGT CC
Sbjct: 572 NKVWFKANCHPMCLVSCVGSCGTGCC 597
Score = 21.4 bits (43), Expect(2) = 0.56
Identities = 5/11 (45%), Positives = 8/11 (72%)
Frame = +3
Query: 255 SPCCNSICCSY 287
+P C+ ICC +
Sbjct: 713 APACSDICCGF 723
>SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19)
Length = 3083
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -3
Query: 366 SIGCRYWGSKRCRTYWSSKRCSVG---CSYRSSKWSCN 262
S+GCRYW S T W++K C VG S R +CN
Sbjct: 2195 SVGCRYW-SLASNT-WTTKGCKVGRRRSSGRQLSCTCN 2230
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Frame = +3
Query: 225 DSSTGLRSCRSPCCNSICCSYSCTLRCTF---CCSNRCGTSCCPSSGILC----CFAILC 383
D+ +G PC + + SC + + CC C P +LC C+ +LC
Sbjct: 1044 DTVSGFGLLAVPCYALLSFAMSCYVVLSLAMSCCPLLC--RAIPCYDLLCLAMTCYDLLC 1101
Query: 384 WCCSNPASGSLHSPCSCCICCRLPIWSSTSSTFP 485
A SL PC +C +P + S P
Sbjct: 1102 LAVPCYALLSLAMPCCPLLCLAVPCYVVLSLAMP 1135
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Frame = +3
Query: 261 CCNSICCSYSCTLRCTF---CCSNRCGTSCCPS--SGILCCFAILCWCC-SNPASGSLHS 422
CC +C + C + CC C C + S + C +LC S P+SG +
Sbjct: 1196 CCPLLCLAVPCYALLSLAMSCCPLLCRAVPCYALLSLAMSCCPLLCLAVQSGPSSGIFGA 1255
Query: 423 PCSCCICC 446
C C C
Sbjct: 1256 VCFCRYEC 1263
>SB_12699| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05)
Length = 215
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 207 QGIESFDSSTGLRSCRSPC--CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAIL 380
+GI +F +S CR PC C++ S CT+ C N+C IL
Sbjct: 56 EGI-NFSASYDQEQCR-PCYQCDNQLVSKECTVTSNRVCLNKCKPKSGMYFDILYQVCEP 113
Query: 381 C-WCCSN 398
C WCC +
Sbjct: 114 CSWCCGD 120
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCS 395
CR+ C +C C +RCT ++C +C P G C F CS
Sbjct: 439 CRARNCTQLCPRGGCRMRCT-SRVDKCVQACNPREG-QCRFECHAKSCS 485
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/88 (25%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRC------TFCCSNRCGTSCCPSSGILC---CFAILCWCCSNP 401
C S CN C C + C C S+ C + CP++ +C C C
Sbjct: 96 CSSRMCNQTCIRAGCKMECYGEECHQTCQSSGCDVT-CPAASKVCVQVCITGRCTMRCGR 154
Query: 402 ASGSLHSPC---SCCICCRLPIWSSTSS 476
G C C + C ST S
Sbjct: 155 GVGRCEQKCLAGKCAMICEARECVSTCS 182
>SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05)
Length = 511
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 207 QGIESFDSSTGLRSCRSPC--CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAIL 380
+GI +F +S CR PC C++ S CT+ C N+C IL
Sbjct: 56 EGI-NFSASYDQEQCR-PCYQCDNQLVSKECTVTSNRVCLNKCKPKSGMYFDILYQVCEP 113
Query: 381 C-WCCSN 398
C WCC +
Sbjct: 114 CSWCCGD 120
>SB_56589| Best HMM Match : zf-C4_Topoisom (HMM E-Value=1.1)
Length = 743
Score = 30.3 bits (65), Expect = 1.0
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 2/117 (1%)
Frame = -3
Query: 438 CSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNR 259
C+R+R RW+D + ++W C ++R T W S R V S S R
Sbjct: 556 CARNRRYASQRWKDSAKAWLLW-----CP-GSARRTSTPW-SVRSFVVAPLNSVPSSTMR 608
Query: 258 GYGRSEGRC--CYQRTQCPAGDINLCSVWRNVLRYSLSVSHVGWSNQRSSGYCWNSC 94
G C + RT+ + V+R R V H + S+ YC N C
Sbjct: 609 TLGHPPTGCELTHLRTRSMEDEATSGVVYRTTERIEFFVGHALRRHYVSAMYC-NRC 664
>SB_49425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 264 CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPC-SCC 437
C S+C + CT C S R S C S C ++C C A +HS C S C
Sbjct: 277 CVSLCAQCMRVVMCTVCAS-RYVHSVCVSLCTQCMRVVMCTVC---ACRYIHSVCVSLC 331
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 264 CNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCS 395
C S+C + CT C R G S C S C ++C C+
Sbjct: 385 CVSLCAQCVRVVMCTVCAC-RLGHSVCVSLCAQCVRVVMCTVCA 427
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSC 341
CR+PC + C ++C C C R C
Sbjct: 1891 CRTPCNAKLKCLHTCAGNCNSCLQQRVHEQC 1921
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Frame = +3
Query: 249 CRSPCCNSICCSYS----CTLRCTFC---CSNRCGTSCCPS-SGILC--CFAILCWCC 392
C+S C ++ C +S CT C C C N+C S C + G C C W C
Sbjct: 1921 CKSKCDRTLFCGHSCQEPCTKNCPPCQKQCENKCEHSKCKNRCGEPCVPCAEPCAWEC 1978
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Frame = +3
Query: 279 CSYSC--TLRCTFCCSNRCGTSCCPSSGILCCFAILCW------CCSNPASGSLHSPCSC 434
C C TL+C C+ +CG C ++ + C C +P + +PC+
Sbjct: 1838 CQEPCPKTLKCGHQCAAKCGDDCTKECMVMIERTLPCGHKHTLKCHVDPTTVKCRTPCNA 1897
Query: 435 CICC 446
+ C
Sbjct: 1898 KLKC 1901
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/62 (25%), Positives = 23/62 (37%)
Frame = +3
Query: 258 PCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCC 437
PCC S+ + C C S CP + C + C CC + + PC
Sbjct: 102 PCCMSLL---RVRVACPCCVSVLRVLIACPCWVSVLCVRVACPCCVSVLRVRVGCPCWVY 158
Query: 438 IC 443
+C
Sbjct: 159 VC 160
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +3
Query: 258 PCCNSIC--CSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCS 431
PC +C C L C S C CP + + C CC + + C
Sbjct: 174 PCWVYVCTGCVAVAVLCFRVCLSLLCVRFVCPCCMSVLYVRVACPCCMSVL--RVRVACP 231
Query: 432 CCI 440
CC+
Sbjct: 232 CCV 234
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Frame = +3
Query: 225 DSSTGLRSCRSPCCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCW 386
+S ++ + CC + CC Y C T+ C CC CC +
Sbjct: 118 NSDVEIQEVKYDCCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYD 177
Query: 387 CC 392
CC
Sbjct: 178 CC 179
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +3
Query: 261 CCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC + CC Y C T+ C CC CC + CC
Sbjct: 154 CCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCCKEVKYDCCKDLTNDCC 203
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +3
Query: 261 CCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC + CC Y C T+ C CC CC + CC
Sbjct: 309 CCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCCKEVKYDCCKDLTNDCC 358
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/50 (28%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +3
Query: 261 CCNSI---CCS---YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC + CC Y C T+ C CC CC + CC
Sbjct: 285 CCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCC 334
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = +3
Query: 243 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
+ ++ CC + Y C T C + CC CC + CC
Sbjct: 335 KEVQNDCCKEV--KYDCCKDLTNDCCKKVQNDCCKEVKYDCCKDLTNDCC 382
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +3
Query: 261 CCNSI---CC---SYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC + CC +Y C + C CC CC + CC
Sbjct: 138 CCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCC 187
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/44 (25%), Positives = 14/44 (31%)
Frame = +3
Query: 261 CCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC + Y C + C CC CC + CC
Sbjct: 277 CCKEV--KYDCCKEVKYDCCKEVKYDCCKDLTYECCKEVKYDCC 318
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 6/50 (12%)
Frame = +3
Query: 261 CCNSI---CC---SYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCC 392
CC + CC +Y C + C CC CC + CC
Sbjct: 293 CCKEVKYDCCKDLTYECCKEVKYDCCKEVKYDCCKDLTYDCCKEVQNDCC 342
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/52 (23%), Positives = 19/52 (36%)
Frame = +3
Query: 243 RSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSN 398
+ ++ CC + Y C T C + CC CC + CC +
Sbjct: 359 KKVQNDCCKEV--KYDCCKDLTNDCCKKVKYDCCKDVTNDCCKEVKYDCCKD 408
>SB_39205| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-09)
Length = 1084
Score = 29.9 bits (64), Expect = 1.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRC 329
C PC ++ C + C +C C+++C
Sbjct: 361 CSEPCPKTLECGHPCARKCGDTCTSKC 387
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Frame = -3
Query: 405 WQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWS--CNRGYGRSEGRC 232
W + + W + Y + C + C C++ W+ C YG + C
Sbjct: 2057 WNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNC---CTHEYG-WNNCCTHEYGWNN--C 2110
Query: 231 C---YQRTQCPAGDINLCSVWRNVLRYSLSVSHV-GWSNQRSSGYCWNSCDCT 85
C Y C + + N R++ +H GWSN S Y W +C CT
Sbjct: 2111 CTHEYGWNNCCTHEYGWNNCCNNKYRWNNCYTHYNGWSNCCSHEYGWYNC-CT 2162
Score = 27.5 bits (58), Expect = 7.1
Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 6/113 (5%)
Frame = -3
Query: 405 WQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWS--CNRGYGRSEGRC 232
W + + W + Y + C + C C++ W+ C YG + C
Sbjct: 2067 WNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNC---CTHEYG-WNNCCTHEYGWNN--C 2120
Query: 231 C---YQRTQCPAGDINLCSVWRNVLRYSLSVSH-VGWSNQRSSGYCWNSCDCT 85
C Y C + + + +S SH GW N ++ Y WN+C CT
Sbjct: 2121 CTHEYGWNNCCNNKYRWNNCYTHYNGWSNCCSHEYGWYNCCTNEYGWNNC-CT 2172
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +3
Query: 285 YSCTLRCTFCCSNRCGTSCCPSSGILC-CFAILCWCCS 395
YSC C F C +C CC ++ C + W C+
Sbjct: 932 YSCPSDCHFSCYPQCTPECCSTTPPTAQCPSSCAWTCA 969
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCC 344
C CC++ + C C + C+ C + CC
Sbjct: 946 CTPECCSTTPPTAQCPSSCAWTCAPDCTSECC 977
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 258 PCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCC 368
P C CCS T T C + C +C P CC
Sbjct: 944 PQCTPECCS---TTPPTAQCPSSCAWTCAPDCTSECC 977
>SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2988
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 363 IGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSC 265
+GC YW + WS++ C VG + SS+ C
Sbjct: 1786 VGCMYWDE--VQENWSTRGCRVGPNTSSSRTHC 1816
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 475 LEVLDHMGSRQHMQQEQGECREPLAGLEQHQ--HSMAKQHRMPLLGQQ 338
+ L H G ++H + G+C L++H H+ K+H P G++
Sbjct: 153 MHALTHTGEKEHQCLQCGKCFALAGTLKRHALIHTEEKEHHCPQCGKR 200
>SB_13393| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 163
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 261 CCN-SICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILC 383
CC+ ++CC + T CC + CC +LCC LC
Sbjct: 107 CCDLTLCCDLTSCCDLTLCCDM---SLCCDL--LLCCDLTLC 143
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 240 LRSCRSPCC-NSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNP 401
L +CR N IC + RC S++C + +G+ CC + C+ P
Sbjct: 3203 LETCREKATDNRICPKVTPPDRCPSGASDQCASDSDCQTGLKCCSSGCILTCTQP 3257
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 285 YSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCW 386
+S L C C + C SC P+ CC CW
Sbjct: 437 FSVPLTCPVGCPSMCAPSCTPA----CCAEQQCW 466
>SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39)
Length = 407
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 465 WTIWVAGSICSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWS 316
WT W + +R+R S GS + ST +VW + + Y K YW+
Sbjct: 194 WTEWGQDARITRARLSDGSGKEVLVSTGLVWPNGLAMDYVDKK---IYWA 240
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSCTLR---CTFCCSNRCGTSC---CPSSGILCCFAILCWCCSNPAS 407
+C PC C + SC C C + G +C CP+ + C C +N
Sbjct: 625 NCTLPCA---CVNGSCNATDGSCN-CAAGYHGNACDRPCPAGKHGANCGLKCLCANNGTC 680
Query: 408 GSLHSPCSCCICCRLPIWSSTSSTFPYG 491
++ CSC P +++ S YG
Sbjct: 681 NAITGRCSCGTGWTGPSCNASCSAGRYG 708
>SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24)
Length = 453
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 6/77 (7%)
Frame = +3
Query: 243 RSCRSPCCNSICCSYSCTLRCT-FC--CSNRCGTSCCPSSGILCCFAILCWCCSNPASGS 413
+ C+S C ++ C + C CT C C C C S C C C+ P +
Sbjct: 24 QQCKSKCDRTLFCGHICQEPCTKNCPPCKEGCQNKCTHSECKKKC-GEPCVPCAEPCAWK 82
Query: 414 L-HSPCS--CCICCRLP 455
H CS C C P
Sbjct: 83 CRHYKCSKLCGEICDRP 99
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +3
Query: 237 GLRSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGI-LCCFAILCWCCSNPASGS 413
G+ R C ++ C+ CT C CSN C C F C S
Sbjct: 145 GVGCKRMQCASAESCNQDCTRGCQLDCSNENTADCTQECKTGSCSFNCAAQTCE---SSC 201
Query: 414 LHSPCSCCIC 443
H C C
Sbjct: 202 AHGSCPNMTC 211
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCT--FCCSN-RCGTSC 341
C CNS C +CT CT C SN +C C
Sbjct: 91 CTDVACNSHTCLQTCTSNCTNMECHSNTKCTQEC 124
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 228 SSTGLRSCRSPCCNSICC-SYSCTLRCTFCCSN 323
+ST + C S C + C S++C CT C+N
Sbjct: 79 ASTCNQRCLSGGCTDVACNSHTCLQTCTSNCTN 111
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSG 356
C+S C C C ++C + C +C S+G
Sbjct: 267 CKSRWCGVTCTGSGCDVKCPNNGTESCDQTCQKSAG 302
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = +3
Query: 162 TSEHSSIRCTS*YRQQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFC----CSNRC 329
TSE + R+ +E FD T + PC N C +CT C CS +C
Sbjct: 108 TSEEWELPSQPTLRKLTVEEFDRITAEAENKMPCTN---CGKLGGKKCTACKIPYCSRKC 164
Query: 330 GTSCCPSSGILCCFAI 377
P C + I
Sbjct: 165 QQQHWPQHKTTCTWKI 180
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 291 SYRSSKWSCNRGYGRSEGRCCYQRTQC 211
+Y S K SC RGY ++ C +C
Sbjct: 805 TYGSYKCSCKRGYAHNDSNVCVDVNEC 831
>SB_41973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2504
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 469 VLDHMGSRQHMQQEQGECREPLAGLEQH--QHSMAKQHRMPLLGQ 341
VL H G + H + G+C L+ H H+ K+H+ P G+
Sbjct: 2348 VLTHTGEKGHQCLQCGKCFAQARHLKTHALTHTRKKEHQCPQCGK 2392
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 339 CCPSSGILCCFAILCWCCSNPASGSLHSPCSCCI 440
CC + GI + + CS+P S + P SCCI
Sbjct: 138 CCGAKGINDWDKNIYFNCSSPGSEACGVPYSCCI 171
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 3 VHCQIKQDVLSQIYRTHRCCLCN 71
V C + +D + Q+++ H C LCN
Sbjct: 917 VLCSVSEDNIMQVWQMHPCGLCN 939
>SB_21208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 321 WSSKRCSVGCSYRSSKWSCNRGYGRSE-GRCCYQRTQCPAGDIN 193
W +K+ V S S K C G +S RCC++ QCP G ++
Sbjct: 397 WKTKKNVVPTSECSKK--CPAGTRQSFINRCCWECFQCPEGTVS 438
>SB_16878| Best HMM Match : Keratin_B2 (HMM E-Value=0.19)
Length = 413
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -3
Query: 300 VGCSYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLCSV 181
V Y SS +SCN G GR+ C T P D CS+
Sbjct: 21 VRAEYCSSDFSCNYGSGRNRICCNNHCTYSPTCDGYSCSM 60
>SB_59267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1444
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 454 GSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQE 335
G +Q+E E ++ + ++Q QH ++ + LL QQE
Sbjct: 368 GDEVRLQREMLEQQQKIIKMQQQQHQQHEEQQQRLLKQQE 407
>SB_59233| Best HMM Match : Involucrin (HMM E-Value=2.5)
Length = 138
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 454 GSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQE 335
G +Q+E E ++ + ++Q QH ++ + LL QQE
Sbjct: 89 GDEVRLQREMLEQQQKIIKMQQQQHQQHEEQQQRLLKQQE 128
>SB_38826| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 505
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -2
Query: 466 LDHMGSRQHMQQEQGECREPLAGLEQH--QHSMAKQHRMPLLGQ 341
L H G + H + G+C + L+ H H+ K HR P G+
Sbjct: 347 LTHTGEKPHQCPQCGKCFALASSLKTHALTHTGEKPHRCPQCGK 390
>SB_44426| Best HMM Match : Lectin_legB (HMM E-Value=4.8)
Length = 439
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 417 HSPCSCCICCRLPIWSSTSST 479
+S CCI P+WSS+ ST
Sbjct: 97 YSELPCCISSSTPVWSSSRST 117
>SB_32228| Best HMM Match : zf-C4 (HMM E-Value=6.2e-23)
Length = 300
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 168 LRYSLSVSHVGWSNQR-SSGYCWNSCDCTRFSSNYKGSSDEYDRF 37
L Y + V V WSN + CW + +C+ Y G + Y +
Sbjct: 254 LTYGVFVCGVTWSNFKIKRNACWENTNCSTTRIRYPGLASFYSPY 298
>SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04)
Length = 1223
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 204 QQGIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSC 341
++G E+ ++T S +P C+ C C CC+ C SC
Sbjct: 243 KKGNENMSTTTSTSSSLNPKCHEYCHGTPAVCYCPQCCAVFC-ESC 287
>SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = +3
Query: 258 PCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSL 416
P C C C L + C G+S C LCC + C C N A+ S+
Sbjct: 587 PACGDDCDCDRCELTISGCPGQTKGSSVCS----LCCMS-ECECEENSAAPSV 634
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/88 (25%), Positives = 29/88 (32%), Gaps = 12/88 (13%)
Frame = +3
Query: 249 CRSPCCNSICCSYSCTLRC------TFCCSNRCGTSCCPSSGILC---CFAILCWCCSNP 401
C S CN C C + C C S+ C + CP++ +C C C
Sbjct: 96 CSSRMCNQTCIRAGCKMECYGDECHQTCQSSGCDVT-CPAASKVCVQVCITGRCTMRCGR 154
Query: 402 ASGSLHSPC---SCCICCRLPIWSSTSS 476
G C C + C ST S
Sbjct: 155 GVGRCEQKCLAGKCAMICEARECVSTCS 182
>SB_59375| Best HMM Match : TPR_2 (HMM E-Value=7.3e-06)
Length = 383
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 204 QQGIESFDSSTGLRSCRSPCCNSICCSYSCTL 299
+ G+E D S RSP C I +Y C +
Sbjct: 22 ESGLEHLDKGCRADSLRSPMCAMILLAYHCVI 53
>SB_41325| Best HMM Match : SWIM (HMM E-Value=0.015)
Length = 950
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +3
Query: 312 CCSNRCGTSCCPSSGILCCFAILCWCCSNPAS 407
CC+ C LCC + L C PA+
Sbjct: 717 CCARALALQCASREPQLCCLSALTLCEKEPAA 748
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = -2
Query: 517 SIEQNAGANPYGNVLEVLDHMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQ 338
+++Q+ NP G + L+ ++ +Q P + HQH++ L Q
Sbjct: 298 TLDQHNVPNPSGTITSALNVPNPSGNITLDQHNVPNPSGSITLHQHNVPNPSGTITLDQH 357
Query: 337 EVPH 326
VP+
Sbjct: 358 NVPN 361
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +3
Query: 288 SCTLRCTFCCSNRCGTSCCP-SSGILC 365
SC +C C C + CC + G LC
Sbjct: 1219 SCPAKCASQCDKSCPSECCSRAKGALC 1245
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 255 SPCCNSICCSYSCTLRCTFCCSNRCGTSC-CPS--SGILC 365
SPC SIC + + TF ++R G +C CP +GILC
Sbjct: 283 SPCGTSICMNGGTCVDNTF-TNSRYGFACVCPRGYTGILC 321
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 255 SPCCNSICCSYSCTLRCTFCCSNRCGTSC 341
+PC N +C S S T C C GT C
Sbjct: 964 NPCLNGVCVSTSSTYTCR-CTVGFKGTRC 991
>SB_44587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 876
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -3
Query: 357 CRYWGSKRCRTYWSSKRCSVGCSYRSSKWSC 265
C G+K C W CS C S++ SC
Sbjct: 285 CDSHGNKTCHPGWYGDSCSKKCEDASTELSC 315
>SB_41418| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 3312
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -3
Query: 342 SKRCR-TYWSSKRCSVGC--SYRSSKWSCNRGYGRSEGRCCYQRTQCPAGDINLC 187
S RCR S C+ C + S + +C +GY G C +C + N C
Sbjct: 348 SPRCRCANQKSASCNATCINTLGSYRCTCAKGYSLIGGTVCQDIDECLSTSTNKC 402
>SB_33054| Best HMM Match : DEAD (HMM E-Value=0.42)
Length = 1088
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 213 IESFDSSTGLRSCRSPCCNSICC-SYSCTLRCTF 311
+ES + GLR SP CC S C L F
Sbjct: 551 VESVEQRKGLRQANSPAYRHTCCLSRGCDLAVRF 584
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 261 CCNSICCSYSCTLRCTFCCSNRCGTSCCPS 350
CC I Y C C FC + CG C P+
Sbjct: 503 CCGVITGCYFCCCCCFFCFNFCCG-KCKPN 531
>SB_6056| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-14)
Length = 270
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 315 CSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCSCC 437
C+ R PS L C I C P + L +PC CC
Sbjct: 137 CNTRSTGKASPS---LSCEVICRICHGGPTTEMLIAPCRCC 174
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 288 SCTLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSPCS 431
S L C C++ C T+C P+ CCF + + G+ SPC+
Sbjct: 275 STELICPTVCASTCTTACSPT----CCFQTPSYTPYSACYGA--SPCA 316
>SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 785
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -3
Query: 267 CNRGYGRSEGR-CCYQRTQCPAGDIN 193
C GY ++ + CC++ T+CP G I+
Sbjct: 530 CPPGYWQTRMKNCCWECTECPQGTIS 555
>SB_35930| Best HMM Match : SNF2_N (HMM E-Value=1.3004e-42)
Length = 784
Score = 27.1 bits (57), Expect = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 285 RSSKWSCNRGYGRSEGRCCY 226
R + C+ G G++ G+CCY
Sbjct: 402 RKKDYPCDCGSGQNRGKCCY 421
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = -3
Query: 438 CSRSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNR 259
C+R+R RW+D + ++W S ++R T W S R V S S R
Sbjct: 966 CARNRRCASQRWKDSAKAWLLWCPS------SARRTSTPW-SVRSFVVAPLNSVPSSTMR 1018
Query: 258 GYGRSEGRCCY 226
G G Y
Sbjct: 1019 TLGHVRGPSAY 1029
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -2
Query: 460 HMGSRQHMQQEQGECREPLAGLEQHQHSMAKQHRMPLLGQQE 335
H QH QQ+Q + ++ +Q Q +Q + L QQ+
Sbjct: 311 HQHQHQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQ 352
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,744,738
Number of Sequences: 59808
Number of extensions: 274507
Number of successful extensions: 1577
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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