Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306G03f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14770.1 68417.m02272 tesmin/TSO1-like CXC domain-containing ... 32 0.20
At5g55110.1 68418.m06870 stigma-specific Stig1 family protein si... 31 0.47
At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein... 31 0.47
At1g32190.1 68414.m03959 expressed protein 30 0.82
At3g22780.1 68416.m02872 CXC domain protein (TSO1) identical to ... 30 1.1
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 30 1.1
At1g69280.1 68414.m07943 expressed protein 29 1.4
At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membr... 29 2.5
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 28 3.3
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 28 3.3
At2g33330.1 68415.m04085 33 kDa secretory protein-related contai... 28 3.3
At1g26820.1 68414.m03268 ribonuclease 3 (RNS3) identical to ribo... 28 3.3
At5g01480.1 68418.m00061 DC1 domain-containing protein contains ... 27 5.8
At1g66660.1 68414.m07574 seven in absentia (SINA) protein, putat... 27 5.8
At3g04850.1 68416.m00526 tesmin/TSO1-like CXC domain-containing ... 27 7.7
At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger) pr... 27 7.7
At2g02990.1 68415.m00251 ribonuclease 1 (RNS1) identical to ribo... 27 7.7
At1g65295.1 68414.m07404 expressed protein 27 7.7
At1g03230.1 68414.m00301 extracellular dermal glycoprotein, puta... 27 7.7
>At4g14770.1 68417.m02272 tesmin/TSO1-like CXC domain-containing
protein similar to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, CXC
domain protein TSO1 [Arabidopsis thaliana] GI:7767425;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain
Length = 658
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = -3
Query: 432 RSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGY 253
R+ +SV D S T R GC S + Y + VGCS C +
Sbjct: 422 RNSDSVQETGDDASKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNAF 481
Query: 252 GRSEG 238
GR +G
Sbjct: 482 GRKDG 486
>At5g55110.1 68418.m06870 stigma-specific Stig1 family protein
similar to stigma-specific protein STIG1 [Nicotiana
tabacum] GI:496647; contains Pfam profile PF04885:
Stigma-specific protein, Stig1
Length = 163
Score = 31.1 bits (67), Expect = 0.47
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 SFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRC--GTSCC 344
S D STG + + CCN+ C S + C N+C G +CC
Sbjct: 86 SSDYSTGANATMA-CCNNKCMDLSTDDKNCGLCKNKCKFGQTCC 128
>At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein 1
(SOL1) identical to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain; supporting cDNA
gi|7767426|gb|AF205142.1|AF205142
Length = 609
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -3
Query: 432 RSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGY 253
R+ +S+ +D S T R GC S + Y + VGCS C +
Sbjct: 391 RNSDSIIEVGEDASKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSINCRCEGCKNAF 450
Query: 252 GRSEG 238
GR +G
Sbjct: 451 GRKDG 455
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 30.3 bits (65), Expect = 0.82
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = +3
Query: 246 SCRSPCCNSICCSYSC-TLRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHS 422
SC C + C SC TL+ F C C C SS CC C C G
Sbjct: 318 SCGCGCGDCGCFKCSCPTLKGCFSC---CKKPSCVSS--CCCPTFKCSSCF----GKPKC 368
Query: 423 P-CSCCICCRLP 455
P CSC C + P
Sbjct: 369 PKCSCWKCLKCP 380
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 15/62 (24%)
Frame = +3
Query: 249 CRSPCCNSICC--SYSCTL-------------RCTFCCSNRCGTSCCPSSGILCCFAILC 383
C+ P C S CC ++ C+ +C C C S C SG CF+ LC
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKCPDTECCRSSCCCSG---CFSWLC 399
Query: 384 WC 389
C
Sbjct: 400 CC 401
Score = 27.9 bits (59), Expect = 4.4
Identities = 28/81 (34%), Positives = 30/81 (37%), Gaps = 5/81 (6%)
Frame = +3
Query: 207 QGIESFDSSTGLRSCRSPCCNSICCSYSCTL---RCTF-CCSNRCGTSCCPSSGILCCFA 374
Q I D STG CC S C SC+ RC CS CG C C
Sbjct: 284 QEIRRRDESTG-------CCCSGLCRPSCSCPKPRCPKPSCSCGCGCGDCGCFKCSCPTL 336
Query: 375 ILCW-CCSNPASGSLHSPCSC 434
C+ CC P S S C C
Sbjct: 337 KGCFSCCKKP---SCVSSCCC 354
>At3g22780.1 68416.m02872 CXC domain protein (TSO1) identical to CXC
domain protein TSO1 [Arabidopsis thaliana] GI:7767425
Length = 695
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -3
Query: 432 RSRESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGY 253
R+ +S+ D S T R GC S + Y + VGCS C +
Sbjct: 464 RNADSIMEASDDASKTPASARHKRGCNCKKSNCMKKYCECYQGGVGCSMNCRCEGCTNVF 523
Query: 252 GRSEG 238
GR +G
Sbjct: 524 GRKDG 528
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Frame = +3
Query: 252 RSPCC-----NSICCSYSCT-LRCTFCCSNRCGTSCCPSSGILCCFAILCWCCSNPASGS 413
+S CC N C S+ C CC + G+SCCP S +C +N
Sbjct: 372 KSTCCCLYEYNGKCYSWGCCPYESATCCDD--GSSCCPQSYPVCDLK------ANTCRMK 423
Query: 414 LHSPCSCCICCRLPIWSSTSST 479
+SP S R P ++T ST
Sbjct: 424 GNSPLSIKALTRGPAIATTKST 445
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Frame = +3
Query: 240 LRSCRSPC---CNSICCSYSCTLRCTFCCSNRCGTSCCPSS 353
L+ C PC C C Y+ + FCC C + CC SS
Sbjct: 330 LKCC--PCFSWCRWPSCDYNSSCGWLFCCHWSCWSCCCCSS 368
>At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membrane
protein (PEX10) identical to zinc-binding peroxisomal
integral membrane protein GI:4337011 from [Arabidopsis
thaliana]
Length = 381
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 300 RCTFCCSNRCGTSCCPSSGILCCFAILCWC 389
+CT C S R + P + C I+ WC
Sbjct: 326 KCTLCLSTRQHPTATPCGHVFCWSCIMEWC 355
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = +3
Query: 315 CSNRCGTSCCP----SSGILCCFA 374
CS RCG + CP ++ + CCFA
Sbjct: 13 CSGRCGEAKCPQLCLATEVFCCFA 36
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = +3
Query: 315 CSNRCGTSCCP----SSGILCCFA 374
CS RCG + CP ++ + CCFA
Sbjct: 69 CSGRCGEAKCPQLCLATEVFCCFA 92
>At2g33330.1 68415.m04085 33 kDa secretory protein-related contains
Pfam PF01657: Domain of unknown function, duplicated in
33 KDa secretory proteins
Length = 304
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = +3
Query: 210 GIESFDSSTGLRSCRSPCCNSICCSYSCTLRCTFCCSNRCGTSCCPSSGILCCFAI 377
G S S TGL CR N+ C Y+C R CG + + C+ +
Sbjct: 79 GTTSQTSVTGLFQCRGDLSNNDC--YNCVSRLPVLSGKLCGKTIAARVQLSGCYLL 132
>At1g26820.1 68414.m03268 ribonuclease 3 (RNS3) identical to
ribonuclease SP:P42815 Ribonuclease 3 precursor (EC
3.1.27.1) {Arabidopsis thaliana}
Length = 222
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 255 YGRSEGRCCYQRTQCPAGDINLCSVWRN 172
Y S CCY +T PA D + +W N
Sbjct: 35 YCDSRHSCCYPQTGKPAADFGIHGLWPN 62
>At5g01480.1 68418.m00061 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 413
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 312 CCSNRCGTSCCPSSGILCCFAILCWCCSNPASGSLHSP 425
CCS + G +C FA+ C NP S ++ +P
Sbjct: 137 CCSCKRGVDALFYYCSICDFAVHMACAGNPTSPTIDNP 174
>At1g66660.1 68414.m07574 seven in absentia (SINA) protein, putative
similar to SIAH2 protein [Brassica napus var. napus]
GI:7657878; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 224
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 267 CNRGYGRSEGRCCYQRTQCPAGDINLCSVWRNVLRYSLSVSHV 139
CN+ E C + R CP + N S + N+ ++ S +HV
Sbjct: 54 CNQS--SHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACSTAHV 94
>At3g04850.1 68416.m00526 tesmin/TSO1-like CXC domain-containing
protein similar to CXC domain containing TSO1-like
protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427, CXC
domain protein TSO1 [Arabidopsis thaliana] GI:7767425;
contains Pfam profile PF03638: Tesmin/TSO1-like CXC
domain
Length = 639
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/64 (25%), Positives = 23/64 (35%)
Frame = -3
Query: 423 ESVGSRWQDWSSTSIVWRSSIGCRYWGSKRCRTYWSSKRCSVGCSYRSSKWSCNRGYGRS 244
++V W + S T R GC S + Y VGCS C +G +
Sbjct: 519 DTVIDLWVENSKTPASARHKRGCNCRKSGCSKKYCECFMMGVGCSSNCRCMGCKNTFGHT 578
Query: 243 EGRC 232
+C
Sbjct: 579 NEQC 582
>At2g35330.1 68415.m04332 zinc finger (C3HC4-type RING finger)
protein-related contains weak hit to Pfam profile:
PF00097 zinc finger, C3HC4 type (RING finger); weak
similarity to RING finger protein 8 (Swiss-Prot:O76064)
[Homo sapiens]
Length = 738
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 363 CCFAILCWCCSNPASGSLHSPCSCC 437
C ++C CS+ GS + C CC
Sbjct: 699 CAHQVVCASCSDSFMGSGKATCPCC 723
>At2g02990.1 68415.m00251 ribonuclease 1 (RNS1) identical to
ribonuclease SP:P42813 Ribonuclease 1 precursor (EC
3.1.27.1) {Arabidopsis thaliana}, GI:561998 from
[Arabidopsis thaliana]
Length = 230
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -3
Query: 255 YGRSEGRCCYQRTQCPAGDINLCSVWRN 172
Y ++ +CCY + PA D + +W N
Sbjct: 43 YCDTQKKCCYPNSGKPAADFGIHGLWPN 70
>At1g65295.1 68414.m07404 expressed protein
Length = 115
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 378 LCWCCSNPASGSLHSPCSCCICCRLP 455
+C CC L SPC I C +P
Sbjct: 69 VCTCCGGAKGLCLPSPCCYAINCNIP 94
>At1g03230.1 68414.m00301 extracellular dermal glycoprotein,
putative / EDGP, putative similar to extracellular
dermal glycoprotein EDGP precursor [Daucus carota]
GI:285741
Length = 434
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 252 RSPCCNSICCSYSCTLRCTFCCS 320
RSP CNS CS + ++ C C S
Sbjct: 83 RSPRCNSAVCSRAGSIACGTCFS 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,620,534
Number of Sequences: 28952
Number of extensions: 175999
Number of successful extensions: 774
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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