Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306G01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p pro...    76   3e-14
AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB...    76   3e-14
AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA...    76   3e-14
AE014297-3469|AAS65203.1|  356|Drosophila melanogaster CG33338-P...    28   8.8  

>AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p
           protein.
          Length = 522

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 33/48 (68%), Positives = 39/48 (81%)
 Frame = +2

Query: 377 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKD 520
           R +I  NILE IG TPLV+LN IP   G+ECEM+AKCEF+NPGGS+KD
Sbjct: 42  RQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKD 89


>AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB,
           isoform B protein.
          Length = 522

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 33/48 (68%), Positives = 39/48 (81%)
 Frame = +2

Query: 377 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKD 520
           R +I  NILE IG TPLV+LN IP   G+ECEM+AKCEF+NPGGS+KD
Sbjct: 42  RQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKD 89


>AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA,
           isoform A protein.
          Length = 522

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 33/48 (68%), Positives = 39/48 (81%)
 Frame = +2

Query: 377 RNRIYNNILETIGDTPLVRLNRIPKDYGLECEMFAKCEFVNPGGSIKD 520
           R +I  NILE IG TPLV+LN IP   G+ECEM+AKCEF+NPGGS+KD
Sbjct: 42  RQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKD 89


>AE014297-3469|AAS65203.1|  356|Drosophila melanogaster CG33338-PA
           protein.
          Length = 356

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -1

Query: 509 NHRDSRIRILQTFHIPSHSLLEF 441
           NHR+  I +L  FH P+H+++EF
Sbjct: 75  NHRNV-ISLLNVFHPPAHNMMEF 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,460,600
Number of Sequences: 53049
Number of extensions: 346878
Number of successful extensions: 540
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)