Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   1.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   2.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.6  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 247 EIPFYCYLCVIRFVQ 203
           E P+ C LC++RF Q
Sbjct: 103 EKPYECKLCLLRFSQ 117


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 247 EIPFYCYLCVIRFVQ 203
           E P+ C LC++RF Q
Sbjct: 359 EKPYECKLCLLRFSQ 373


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 4    CRIRHEANTKICSKVYFLFVLKF 72
            C + +    ++ +K+YF +++KF
Sbjct: 1013 CHVCYATIQEVRAKIYFFYLVKF 1035


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +1

Query: 4   CRIRHEANTKICSKVYFLFVLKF 72
           C + +    ++ +K+YF +++KF
Sbjct: 294 CHVCYATIQEVRAKIYFFYLVKF 316


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 375 ETTYNSRPW 349
           +T YN RPW
Sbjct: 529 QTVYNHRPW 537


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/45 (20%), Positives = 17/45 (37%)
 Frame = -3

Query: 492 KYCNACSTSLSTIAQASSEIPSGKYRSRMSRHEPKLMSGETTYNS 358
           K C  C    + +  +  EIP        + + P   +  T +N+
Sbjct: 99  KSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNN 143


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/45 (20%), Positives = 17/45 (37%)
 Frame = -3

Query: 492 KYCNACSTSLSTIAQASSEIPSGKYRSRMSRHEPKLMSGETTYNS 358
           K C  C    + +  +  EIP        + + P   +  T +N+
Sbjct: 47  KSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNN 91


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/45 (20%), Positives = 17/45 (37%)
 Frame = -3

Query: 492 KYCNACSTSLSTIAQASSEIPSGKYRSRMSRHEPKLMSGETTYNS 358
           K C  C    + +  +  EIP        + + P   +  T +N+
Sbjct: 230 KSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNN 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,340
Number of Sequences: 336
Number of extensions: 2948
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)