Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F11f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868...    28   4.0  
02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619...    28   4.0  
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418...    27   6.9  
10_07_0105 + 12922828-12923448,12923554-12923907,12924008-129243...    27   6.9  
09_06_0269 - 21947847-21947904,21947988-21948169,21948268-219489...    27   9.1  
05_04_0438 + 21244735-21244782,21245089-21245274,21245307-212453...    27   9.1  

>08_02_0581 +
           18986084-18986176,18986284-18986668,18986779-18986861,
           18986966-18987110,18987823-18987951,18988047-18988171,
           18988261-18988419,18988503-18988665,18988750-18988875,
           18989110-18989471,18989572-18989772,18989873-18989982,
           18990079-18990163,18990298-18990426,18990505-18990610,
           18990688-18990776,18990885-18991184
          Length = 929

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = -3

Query: 174 LVLFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYFFVIINLYISI 16
           ++ + + F L  V++  F +    I L FF   ++     +++F+ INL I++
Sbjct: 403 MISYSYFFALSAVYMIVFVVFGSLIGLNFFKTNNYGIQF-VFYFIYINLQIAL 454


>02_02_0028 +
           6196453-6196512,6196936-6197320,6197843-6197925,
           6198060-6198183,6198404-6198523,6198595-6198755,
           6198999-6199157,6199272-6199434,6199604-6199729,
           6199775-6199900,6200400-6200764,6201204-6201404,
           6201685-6201794,6201919-6202003,6202553-6202681,
           6202763-6202868,6202984-6203072,6203172-6203474
          Length = 964

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = -3

Query: 171 VLFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYFFVIINLYISILNIT 4
           + + + FLL  +++  F +    + L FF  ++ +    +Y+F  +NL IS   +T
Sbjct: 395 ISYCYFFLLSLLYVMSFTLFGSVLGLRFF-RLNDYSVQFVYYFAYMNLQISFAFLT 449


>12_02_0457 +
           19239816-19241319,19241337-19241632,19241729-19241829,
           19241939-19242029,19242158-19242268,19242360-19242425,
           19242457-19242462
          Length = 724

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +1

Query: 1   ISDIENTYIQINDDKEINTNIEM 69
           ++ +E T +++NDDK++ T I++
Sbjct: 660 VNTVECTVLEVNDDKDLGTTIDV 682


>10_07_0105 +
           12922828-12923448,12923554-12923907,12924008-12924330,
           12928324-12928401,12928760-12928883
          Length = 499

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = +1

Query: 10  IENTYIQINDDKEINTNIEMEGNLTKECQEYLSIQNSEVIDVYAVQE 150
           I +T++ ++DD E   ++  EG +T    + ++  + +V+DV  V E
Sbjct: 206 ITSTFVDLDDDMEALESVLDEGEVTMFYADSMTNPHLKVVDVTRVAE 252


>09_06_0269 -
           21947847-21947904,21947988-21948169,21948268-21948963,
           21949378-21950021,21950441-21950543,21950618-21950812,
           21951308-21951931
          Length = 833

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -3

Query: 465 KTGVLHKYSALVNNITSSCRHEASCRKHFFIYKFTNSTER 346
           K GV+   SAL   + SS R  AS  K  F    TNS E+
Sbjct: 635 KPGVVRSESALGRYVPSSARTRASGVKGNFPVSLTNSCEQ 674


>05_04_0438 +
           21244735-21244782,21245089-21245274,21245307-21245384,
           21245385-21245678,21246137-21246262,21246935-21247168,
           21247534-21248061
          Length = 497

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = -3

Query: 150 LLYCVHIYDFG---ILNRKIFLTFFSEISFHFYICIYFFVIINLYISIL 13
           LL+ V +  FG    L  + +  FF  +S    +CIY F +  LYI  L
Sbjct: 227 LLFRVELKLFGWVPALGERNYRFFFLFVSSSTLLCIYVFAMSALYIKFL 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,576,647
Number of Sequences: 37544
Number of extensions: 197482
Number of successful extensions: 510
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)