Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

K01664-1|AAA28872.1|   81|Drosophila melanogaster protein ( D.me...    30   2.2  
BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    29   2.9  
AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cat...    29   2.9  
AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cat...    29   2.9  
AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB...    29   2.9  
AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA...    29   2.9  
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    29   2.9  

>K01664-1|AAA28872.1|   81|Drosophila melanogaster protein (
           D.melanogaster Bkm-likeDNA (proximal region X
           chromosome) 5' end, clone CS319.).
          Length = 81

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 102 IFLTFFSEISFHFYICIYFFVIINLYISI 16
           I+L+ +  I    Y+CIY  + +++Y+SI
Sbjct: 29  IYLSIYLSIYLSIYLCIYLSISLSIYLSI 57


>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
 Frame = -3

Query: 174 LVLFY---FIFLLYCVHIYDFGILNRKIFLTFFSEISFH---FYICIYF--FVIINLYIS 19
           L LFY   + F L+CV +YD  ++         ++ S++   + +CI F  F +I   +S
Sbjct: 194 LFLFYAEVYCFYLFCVMVYDLYLICGFEVTALKNQHSWNILQYLVCILFNIFTVIMYTVS 253

Query: 18  ILNIT 4
           +LN++
Sbjct: 254 LLNVS 258


>AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cation
           channel long form protein.
          Length = 1128

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 168 LFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYFFVIINLYISILN 10
           LF+ +F L  + +  F +   KIF  F+  + F  Y  I   V++NL I+++N
Sbjct: 603 LFWAVFGL--IDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMN 653


>AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cation
           channel short form protein.
          Length = 1128

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 168 LFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYFFVIINLYISILN 10
           LF+ +F L  + +  F +   KIF  F+  + F  Y  I   V++NL I+++N
Sbjct: 603 LFWAVFGL--IDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMN 653


>AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB,
           isoform B protein.
          Length = 1128

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 168 LFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYFFVIINLYISILN 10
           LF+ +F L  + +  F +   KIF  F+  + F  Y  I   V++NL I+++N
Sbjct: 603 LFWAVFGL--IDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMN 653


>AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA,
           isoform A protein.
          Length = 1128

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 168 LFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYFFVIINLYISILN 10
           LF+ +F L  + +  F +   KIF  F+  + F  Y  I   V++NL I+++N
Sbjct: 603 LFWAVFGL--IDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMN 653


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
 Frame = -3

Query: 174 LVLFY---FIFLLYCVHIYDFGILNRKIFLTFFSEISFH---FYICIYF--FVIINLYIS 19
           L LFY   + F L+CV +YD  ++         ++ S++   + +CI F  F +I   +S
Sbjct: 172 LFLFYAEVYCFYLFCVMVYDLYLICGFEVTALKNQHSWNILQYLVCILFNIFTVIMYTVS 231

Query: 18  ILNIT 4
           +LN++
Sbjct: 232 LLNVS 236


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,765,141
Number of Sequences: 53049
Number of extensions: 348650
Number of successful extensions: 877
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)