Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    38   0.004
AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm rec...    35   0.041
AC024211-8|AAF36062.1|  832|Caenorhabditis elegans Hypothetical ...    31   0.50 
Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical pr...    30   1.2  
CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical ...    29   1.5  
U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine rece...    28   3.5  
Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z70213-5|CAA94174.1|  256|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U41991-3|AAA83343.2|  350|Caenorhabditis elegans Seven tm recept...    28   4.7  
Z78539-7|CAB01726.2|  560|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z74474-2|CAA98955.1|  425|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U23454-4|AAC46517.1|  217|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF003145-7|AAB57714.2|  352|Caenorhabditis elegans Serpentine re...    27   6.2  
Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    27   8.1  
AF016432-6|AAB65383.1|  342|Caenorhabditis elegans Seven tm rece...    27   8.1  

>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 37.9 bits (84), Expect = 0.004
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
 Frame = -3

Query: 252 LFLKYFLYTYPYIMYETVLE*IQDLQLVLFYFIFLLYCVHIYDFGILNRKIFL------- 94
           +F  ++L T+P+ +    L  ++D   +LF  +   Y +  + F +L   I         
Sbjct: 26  IFTLFYLITFPFYVLSFNLNRMRDKNTLLFPTVSHFYEMVKFTFYLLVLLILCIPLLFVA 85

Query: 93  TFFSEISFHFYICIYFFVIINLY 25
           T FSEI+ +  IC+ FF+I+ LY
Sbjct: 86  THFSEIAVYLVICLAFFIILALY 108


>AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 83 protein.
          Length = 333

 Score = 34.7 bits (76), Expect = 0.041
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = -3

Query: 279 YIIYHR-EVALFLKYFLYTYPYIMYETVLE*IQDL-QLVLFYFIFLLYCVHIYDFGILNR 106
           Y+ Y   E+ +   YF+Y Y Y ++ T     Q++ Q+++  F  +  C+ +    +   
Sbjct: 52  YVAYSAIEILVLPSYFIYEYTYFLFTTQFTQYQNMSQILIVTFCSIFACMQV----VRAA 107

Query: 105 KIFLTFFSEISFHFYICIYFF 43
           +    +FS  S H Y+C  +F
Sbjct: 108 QFIYRYFSVASLH-YLCDKYF 127


>AC024211-8|AAF36062.1|  832|Caenorhabditis elegans Hypothetical
           protein Y76B12C.1 protein.
          Length = 832

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -3

Query: 219 YIMYETVLE*IQDLQLVLFY--FIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYF 46
           Y+  +T    ++ ++LV  Y  + F++      DF    + +FLT    I FH+  C+YF
Sbjct: 324 YLFIDTKASLVRAIRLVKAYRLYEFIMLTQRRTDFPHFMKILFLTSSCAILFHWNACVYF 383

Query: 45  FVIINLY 25
             + +LY
Sbjct: 384 --LFSLY 388


>Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical
           protein F08A10.2 protein.
          Length = 326

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = -3

Query: 171 VLFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYFFVIINLYISILNI 7
           +  + +F+++ +++Y +   ++   +  F  I+ HFY  I +F  I L+  I  I
Sbjct: 25  IYLFSLFIMFPIYVYVYRYNDKNDKMALFHPITSHFYKMIKWFHAIALFFIIFLI 79


>CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical
           protein C42C1.7 protein.
          Length = 710

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 22/65 (33%), Positives = 32/65 (49%)
 Frame = -3

Query: 252 LFLKYFLYTYPYIMYETVLE*IQDLQLVLFYFIFLLYCVHIYDFGILNRKIFLTFFSEIS 73
           LF   ++ TYP  MY  +L  I      LF  I +L  V   D+ + NR   LT+  +IS
Sbjct: 283 LFPMVYIVTYPIAMYSFLLRPI----FTLFTGILMLLSVD--DYYLSNR--VLTYIGDIS 334

Query: 72  FHFYI 58
           +  Y+
Sbjct: 335 YSLYL 339


>U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine
           receptor, class x protein47 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 468 LKTGVLHKYSALVNNITSSCRHEASCRKHFFIYKFTNS 355
           L T  ++ +++++   TS CR+  S   H F+Y  +NS
Sbjct: 124 LFTANMYAFASIIVLYTSGCRYFWSSELHMFMYHVSNS 161


>Z81050-4|CAB02854.1|  329|Caenorhabditis elegans Hypothetical
           protein C50B6.5 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -3

Query: 225 YPYIMYETVLE*IQDLQLVLFYFIFLLYCVHIYDFGILNRKIFLTFFSEISFHFYICIYF 46
           YP I +  ++  +    L  FY I  L  +H   + I+   +F    S  +F    C Y 
Sbjct: 74  YPLIRFTAIMTQLGFSGLFQFYTINAL--IHQTGYSIIEMYMFRFKASTYNFQS-TCFYV 130

Query: 45  FVIINLYI 22
           ++ INLYI
Sbjct: 131 YLQINLYI 138


>Z70213-5|CAA94174.1|  256|Caenorhabditis elegans Hypothetical
           protein ZK930.6 protein.
          Length = 256

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 9/30 (30%), Positives = 22/30 (73%)
 Frame = -3

Query: 96  LTFFSEISFHFYICIYFFVIINLYISILNI 7
           ++ F+E+S HFY+  + F+I++   ++L++
Sbjct: 216 ISSFAELSSHFYVLFWSFLILSSMNALLDV 245


>U41991-3|AAA83343.2|  350|Caenorhabditis elegans Seven tm receptor
           protein 220 protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -3

Query: 291 NFLYYIIYHREVALFLKYFLYTYPYIMYETVLE*IQDLQLVLFYFIFLL 145
           N  Y+  +   +A+F  +F+Y Y  I    +L+  Q  +L+L+  I L+
Sbjct: 96  NSFYWGFFGSSLAIFAIHFVYRYLVISGNALLQTFQSWKLILWLMIPLV 144


>Z78539-7|CAB01726.2|  560|Caenorhabditis elegans Hypothetical
           protein C31E10.5 protein.
          Length = 560

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 7   DIENTYIQINDDKEINTNIEMEGNLTKECQEYLSI 111
           D+ + Y++ NDDK ++  I +   ++K  Q  +SI
Sbjct: 408 DLCSDYVEFNDDKIVDDIIALSNRISKVVQVIMSI 442


>Z74474-2|CAA98955.1|  425|Caenorhabditis elegans Hypothetical
           protein K10C8.2 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 186 QDLQLVLFYFIFLLYCV-HIYDFGILNRKIFLTFFSEISFHFYICIYFFVIIN 31
           Q+++     F+F  Y    +Y FGI++  I +  FS+ S   +   +FF+ ++
Sbjct: 11  QEIEFTHAQFLFRSYLFPFVYLFGIISNSINICVFSQKSMRNHTVNWFFLALS 63


>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -3

Query: 291 NFLYYI-IYHREVALFLKYFLYTYPYIMYETVLE*IQDLQLVLFYFIFLLYCVHIYDFGI 115
           NF+Y I ++H  +ALFL  F  T  + +Y             L +  + +Y ++   + I
Sbjct: 44  NFIYNIWMFHLLIALFLSVFCKTLNFAIYRAGFR--------LLHMCYNVYILYTLGYMI 95

Query: 114 LNRKIFLTFFSEISFHFY 61
           +   I L F  E ++  Y
Sbjct: 96  VPFHISLYFLFEFTYTVY 113


>U23454-4|AAC46517.1|  217|Caenorhabditis elegans Hypothetical
           protein C10A4.3 protein.
          Length = 217

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 129 YDFGILNRKIFLTFFSEISFHFYICIYFFVIINL 28
           + + ILN    ++FF++I+F   +CI+     NL
Sbjct: 52  FPYQILNHLSQISFFTKINFAVDLCIFVITTFNL 85


>AF003145-7|AAB57714.2|  352|Caenorhabditis elegans Serpentine
           receptor, class z protein4 protein.
          Length = 352

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = -3

Query: 180 LQLVLFYFIFLLYCVHIYDFGILNRKIF-LTFFSEISFHFY--IC-IYFFVIINLYISIL 13
           + L+    IF LY V++Y    LNRK   L +F  I+ HFY  IC + F++ + L I  +
Sbjct: 27  IYLISIIVIFPLY-VYVYR---LNRKTEKLAYFYPITKHFYSVICSMQFYIYVTLSIGAI 82


>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 96  LTFFSEISFHFYICIYFFV 40
           LTFF    F FYI  YFF+
Sbjct: 270 LTFFCNAPFAFYIIYYFFL 288


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 96  LTFFSEISFHFYICIYFFV 40
           LTFF    F FYI  YFF+
Sbjct: 253 LTFFCNAPFAFYIIYYFFL 271


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 96  LTFFSEISFHFYICIYFFV 40
           LTFF    F FYI  YFF+
Sbjct: 253 LTFFCNAPFAFYIIYYFFL 271


>AF016432-6|AAB65383.1|  342|Caenorhabditis elegans Seven tm
           receptor protein 228 protein.
          Length = 342

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -3

Query: 291 NFLYYIIYHREVALFLKYFLYTYPYIMYETVLE*IQDLQLVLFYFIFLLYCV 136
           N  Y+  +   +A+F  +F+Y +  +    +LE     +L+L++ I L Y +
Sbjct: 95  NSCYWGFFGASMAMFAVHFVYRWLVVTKNPLLETFNGWKLILWFSIPLWYAL 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,557,778
Number of Sequences: 27780
Number of extensions: 203354
Number of successful extensions: 657
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)