BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306F10f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 0.88
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 25 1.2
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 25 1.5
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 25 2.0
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 2.0
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 24 2.7
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 24 2.7
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 24 2.7
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 24 2.7
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 4.7
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 23 6.2
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.8 bits (54), Expect = 0.88
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 167 EVEQRVHNRQGHEGVHLAAARQGHPPHHR 81
E +QR + Q H G AAA PP HR
Sbjct: 896 EQQQRSSSSQQHRGPGAAAATGPPPPTHR 924
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 25.4 bits (53), Expect = 1.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 191 LHGTHLRHEVEQRVHNRQGHEGVHLAAA 108
L+ +HL H + H+ G EGV + A
Sbjct: 1309 LNSSHLHHHLHHGHHHHHGGEGVPMGPA 1336
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 25.0 bits (52), Expect = 1.5
Identities = 11/42 (26%), Positives = 16/42 (38%)
Frame = +1
Query: 61 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRCVP 186
C P P++ + C P C C+ T + CVP
Sbjct: 34 CCAPCPQKACISEAVKCQTSCLPGCVCKKGFVRETQFGNCVP 75
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 159 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 272
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 2.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 159 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 272
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNIAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 2.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 159 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 272
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 2.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 159 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 272
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.2 bits (50), Expect = 2.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 159 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 272
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 24.2 bits (50), Expect = 2.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 159 FNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRP 272
FN+ VC S+ PG + T+ PT LRP
Sbjct: 73 FNVAIDVCDFPVNAKCESQSPGDQTTTTLRPTTTTLRP 110
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 23.4 bits (48), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 383 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 472
AD AA +RY + + RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 98 HPPHHRRGAGQAHRSQGRRAVG 33
HP HH G+G++ + G VG
Sbjct: 1402 HPHHHHNGSGRS-KPPGPEGVG 1422
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,430
Number of Sequences: 2352
Number of extensions: 14025
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -