Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306F09f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKQ1 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q7RNT5 Cluster: Putative uncharacterized protein PY0173...    33   5.2  
UniRef50_A2SS51 Cluster: Transcriptional regulator, TrmB; n=1; M...    32   6.9  
UniRef50_UPI00015B57A1 Cluster: PREDICTED: similar to GA18094-PA...    32   9.2  

>UniRef50_Q8IKQ1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 3455

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = -2

Query: 148  FYYSKYIIMPYVTIKEISKFIFYIKVR*TLLKVHSRRLLYMFQKYIYIH 2
            +YYS   +M YV  + +  ++ +   +  LL +++   LYMF +YIY+H
Sbjct: 1361 YYYSCEDLMDYVKNENLKTYLSFKNNQLKLL-IYNFLYLYMFDEYIYMH 1408


>UniRef50_Q7RNT5 Cluster: Putative uncharacterized protein PY01730;
            n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01730 - Plasmodium yoelii yoelii
          Length = 1692

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 178  NMGGLLKKRTFYYSKYII-MPYVTIKEISKFIFYIKVR*TLLKVHSRRLLYMFQKYI 11
            N    LK+RT++   Y   MPY   K + K IF   +   LL +H++  +Y F KYI
Sbjct: 1197 NFSDQLKQRTYFILIYKCNMPYAIKKYVYKKIFRKYIN--LLCMHNKEKVYKFVKYI 1251


>UniRef50_A2SS51 Cluster: Transcriptional regulator, TrmB; n=1;
           Methanocorpusculum labreanum Z|Rep: Transcriptional
           regulator, TrmB - Methanocorpusculum labreanum (strain
           ATCC 43576 / DSM 4855 / Z)
          Length = 262

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +1

Query: 136 YCNKMFVFLVNRPYLSEHVE*TIQSTWIIIHYLLHIFQTSMTAVSIIIFLYMYVIKKIVR 315
           Y +    F  NRP LS     T+Q+TW I  +L  +F  S   + +I     YV K I+ 
Sbjct: 96  YLHSRITFQHNRPLLSH----TLQNTWAIDSHLRMMFNRSKKEIVMICHDTAYVKKHILN 151

Query: 316 L 318
           L
Sbjct: 152 L 152


>UniRef50_UPI00015B57A1 Cluster: PREDICTED: similar to GA18094-PA;
           n=2; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA18094-PA - Nasonia vitripennis
          Length = 485

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +1

Query: 199 TIQSTWIIIHYLLHIFQTSMTAVSIIIFLYMYVIKKIVRLIEFQ*NVLTMLSNL 360
           T+  TW  I YLL ++  ++  +S+ ++  + +IK  VRL   + N  T  +N+
Sbjct: 427 TMDFTWWQI-YLLDVYAVTVLGISMFLYFLIGIIKIFVRLFNLKNNKKTKKNNI 479


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,320,939
Number of Sequences: 1657284
Number of extensions: 7606921
Number of successful extensions: 18472
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18431
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)